Lag0023057 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0023057
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr7: 43530998 .. 43532398 (+)
RNA-Seq ExpressionLag0023057
SyntenyLag0023057
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAATCGCAGCGAAATGGCAGCATTTGTCTTTAACAGAGGAGGAGGCGAAGGGTATAATCACCAATGAACACAGCCCCCTCCTCTCTGCAGAAGAAATCCAACTTTGTGTGGTTGGAAAGGTGTTCACCAGTCGCCGGATTAATTTGGATGCGTTCAGGGCAGTGATGAAGTCGGTCTAGCGTATTCATACTTCCACAAGAATTGAAAGAGCGGATGAGAACATCTTCATTGTGAAGTTCCGCACCATGGAGGAAAAGGCACGCATTTTGGCTAATGGCCCATGGATGTTTGATAAAGCGCTCATTGTTCTTGTGGTGCCTTGTGCTTCTGAGAATGTAGTGGATTTACCTTTTAATGAAACCTCCTTTTGGGTACAGGTCCACAATGTTCCTCTTGCTCGTCAAACACGTGACTTTGCTCTGTTATTGGGTGAACAATTGGGCATGGTGGAAGAGATTGATGGGTTTGGGATAGATTGTTGGACAGGACCAATTATCCGATTGCGTGTCTGTTTAAGGTTGGATAAACCACTCAGGCGGGGTTTCAAGCTTCTTGATTTGGGAAAGGCCCCAGGGTGGTGTCCCGTCCAATACGAAAAATTACCGGATTTTTGTTATTCTTGTGGATGTCTTGGCCATGTTAAGAGAGAATGTCCAAAGCAAATTCAAGGATCTTCTAGCTTGACAGTGGACCAATATGGTGAATGGCTTCGTGCGACCCCTTTCAAAACAACTCTGCTGCGAAGCAAGTTCGGCGGTGCAGGTTCTAAAGCAGATGACGGTCATGATGCTCCGACGACAGAGGACGGTGCCGAATGTGCTGGGCTGGTTCGTGGGTCACCTCCGACGGTTTTAGCGACGTCGTCGGGGGATACTTCTCGGAAAGTTGATAGTACGACGGGCGTTGATCCGGTTCCGACCAAGAACGTGACCGCTTCAATTCCCACGTCTACGAAGATTACGGGCCTCAAGCCATTAGATTCGGAGAATTTGATGATCGTTGAAACTGCTTGCCAAGAGGGACACGTGGATGGTGGGGAGACATGGAAAGGAAAAGAAAAGATAATTCCAGTGTTGGGCCTAGGCCATGCCACAGATTCGGCCTAGGTTGTTGTTGGGTCCAAGCCACAGTCTGTTAAGTCAGGAACTAAGGGATGGAAACGTCGTGCACGTGATGGGCCAAATGAGTCTGATACACATTTTCATACAGAGGGAATTACCGGAGGCAAACGACTGTATGAGGGCCATCGATCTCCTTCTGACGTGATTCTGAAAAAGACAAAACGAACTCCTGATGTGGTGGCTATTTCGGCACTTCCCCATACATCTGCTGATGATTCTTCTGCTCCTTTGGATTTGGCGGCGGCTGGTTCCCAGCCCCGCCAGTCGTCATGA

mRNA sequence

ATGGATGAAATCGCAGCGAAATGGCAGCATTTGTCTTTAACAGAGGAGGAGGCGAAGGGTATAATCACCAATGAACACAGCCCCCTCCTCTCTGCAGAAGAAATCCAACTTTGTGTGGTTGGAAAGTTCCGCACCATGGAGGAAAAGGCACGCATTTTGGCTAATGGCCCATGGATGTTTGATAAAGCGCTCATTGTTCTTGTGGTGCCTTGTGCTTCTGAGAATGTAGTGGATTTACCTTTTAATGAAACCTCCTTTTGGGTACAGGTCCACAATGTTCCTCTTGCTCGTCAAACACGTGACTTTGCTCTGTTATTGGGTGAACAATTGGGCATGGTGGAAGAGATTGATGGGTTTGGGATAGATTGTTGGACAGGACCAATTATCCGATTGCGTGTCTGTTTAAGGTTGGATAAACCACTCAGGCGGGGTTTCAAGCTTCTTGATTTGGGAAAGGCCCCAGGGTGGTGTCCCGTCCAATACGAAAAATTACCGGATTTTTGTTATTCTTGTGGATGTCTTGGCCATGTTAAGAGAGAATGTCCAAAGCAAATTCAAGGATCTTCTAGCTTGACAGTGGACCAATATGGTGAATGGCTTCGTGCGACCCCTTTCAAAACAACTCTGCTGCGAAGCAAGTTCGGCGGTGCAGGTTCTAAAGCAGATGACGGTCATGATGCTCCGACGACAGAGGACGGTGCCGAATGTGCTGGGCTGGTTCGTGGGTCACCTCCGACGGTTTTAGCGACGTCGTCGGGGGATACTTCTCGGAAAGTTGATAGTACGACGGGCGTTGATCCGGTTCCGACCAAGAACGTGACCGCTTCAATTCCCACGTCTACGAAGATTACGGGCCTCAAGCCATTAGATTCGGAGAATTTGATGATCGTTGAAACTGCTTGCCAAGAGGGACACGTGGATGGAACTAAGGGATGGAAACGTCGTGCACGTGATGGGCCAAATGAGTCTGATACACATTTTCATACAGAGGGAATTACCGGAGGCAAACGACTGTATGAGGGCCATCGATCTCCTTCTGACGTGATTCTGAAAAAGACAAAACGAACTCCTGATGTGGTGGCTATTTCGGCACTTCCCCATACATCTGCTGATGATTCTTCTGCTCCTTTGGATTTGGCGGCGGCTGGTTCCCAGCCCCGCCAGTCGTCATGA

Coding sequence (CDS)

ATGGATGAAATCGCAGCGAAATGGCAGCATTTGTCTTTAACAGAGGAGGAGGCGAAGGGTATAATCACCAATGAACACAGCCCCCTCCTCTCTGCAGAAGAAATCCAACTTTGTGTGGTTGGAAAGTTCCGCACCATGGAGGAAAAGGCACGCATTTTGGCTAATGGCCCATGGATGTTTGATAAAGCGCTCATTGTTCTTGTGGTGCCTTGTGCTTCTGAGAATGTAGTGGATTTACCTTTTAATGAAACCTCCTTTTGGGTACAGGTCCACAATGTTCCTCTTGCTCGTCAAACACGTGACTTTGCTCTGTTATTGGGTGAACAATTGGGCATGGTGGAAGAGATTGATGGGTTTGGGATAGATTGTTGGACAGGACCAATTATCCGATTGCGTGTCTGTTTAAGGTTGGATAAACCACTCAGGCGGGGTTTCAAGCTTCTTGATTTGGGAAAGGCCCCAGGGTGGTGTCCCGTCCAATACGAAAAATTACCGGATTTTTGTTATTCTTGTGGATGTCTTGGCCATGTTAAGAGAGAATGTCCAAAGCAAATTCAAGGATCTTCTAGCTTGACAGTGGACCAATATGGTGAATGGCTTCGTGCGACCCCTTTCAAAACAACTCTGCTGCGAAGCAAGTTCGGCGGTGCAGGTTCTAAAGCAGATGACGGTCATGATGCTCCGACGACAGAGGACGGTGCCGAATGTGCTGGGCTGGTTCGTGGGTCACCTCCGACGGTTTTAGCGACGTCGTCGGGGGATACTTCTCGGAAAGTTGATAGTACGACGGGCGTTGATCCGGTTCCGACCAAGAACGTGACCGCTTCAATTCCCACGTCTACGAAGATTACGGGCCTCAAGCCATTAGATTCGGAGAATTTGATGATCGTTGAAACTGCTTGCCAAGAGGGACACGTGGATGGAACTAAGGGATGGAAACGTCGTGCACGTGATGGGCCAAATGAGTCTGATACACATTTTCATACAGAGGGAATTACCGGAGGCAAACGACTGTATGAGGGCCATCGATCTCCTTCTGACGTGATTCTGAAAAAGACAAAACGAACTCCTGATGTGGTGGCTATTTCGGCACTTCCCCATACATCTGCTGATGATTCTTCTGCTCCTTTGGATTTGGCGGCGGCTGGTTCCCAGCCCCGCCAGTCGTCATGA

Protein sequence

MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGKFRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQYGEWLRATPFKTTLLRSKFGGAGSKADDGHDAPTTEDGAECAGLVRGSPPTVLATSSGDTSRKVDSTTGVDPVPTKNVTASIPTSTKITGLKPLDSENLMIVETACQEGHVDGTKGWKRRARDGPNESDTHFHTEGITGGKRLYEGHRSPSDVILKKTKRTPDVVAISALPHTSADDSSAPLDLAAAGSQPRQSS
Homology
BLAST of Lag0023057 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-48
Identity = 95/248 (38.31%), Postives = 144/248 (58.06%), Query Frame = 0

Query: 1   MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK------------------ 60
           MDEI   W+H   T +E + +  +   P+L+A+ ++LCVV K                  
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 61  ---------------------FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPF 120
                                F+++ EK+R+L++GPW F+K+L+VL  P A+   +D+ F
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 121 NETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPL 180
           N  +FW+Q+HN+P    + + A +LG +LG VEEI+G G D W GP IR+RV + + KPL
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180

Query: 181 RRGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQYGEWLR 210
           RRG KL +      WCP++YEKLPDFCY CG +GH  REC ++ +  ++ + +QYG+WLR
Sbjct: 181 RRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR 240

BLAST of Lag0023057 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-37
Identity = 81/222 (36.49%), Postives = 116/222 (52.25%), Query Frame = 0

Query: 1   MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK------------------ 60
           MD+I   W++ +L +EE   I+ +   P+L+ + IQLC VGK                  
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 61  ---------------------FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPF 120
                                F+TM EK R+ + GPW FDK+L++LV   A+   +D+  
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 121 NETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPL 180
           +  +FWVQ+H +     T+D A  LG +LG VEE+DG     W  P + +RV + + KPL
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

Query: 181 RRGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPK 184
           RRG K+        WCP++YE+LPDFCY CGC+GH  RE  K
Sbjct: 181 RRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIREYEK 222

BLAST of Lag0023057 vs. NCBI nr
Match: KAF5464529.1 (hypothetical protein F2P56_014601 [Juglans regia])

HSP 1 Score: 147.1 bits (370), Expect = 3.1e-31
Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 0

Query: 39  VVGKFRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQ 98
           ++ +F ++++K ++L  GPW FD  L+++        V  +     +FWV++H++PL  +
Sbjct: 79  MLAEFESIKDKEKVLRGGPWSFDNHLVLMAEVDGRSQVHQIKLTTAAFWVRIHDLPLMAR 138

Query: 99  TRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCP 158
           T     LLG ++G VEE+D    D   G  +R+RV L +DKPL RG K    G+ P W  
Sbjct: 139 TEYVGRLLGSKMGTVEEVDVEAGDMKWGQFLRVRVLLPVDKPLLRGSKFTIGGREPVWVS 198

Query: 159 VQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQ--YGEWLRA 203
             YE+LP FCY CGCLGH +REC   I+G   ++V    YG WLRA
Sbjct: 199 FSYERLPIFCYRCGCLGHSERECVNSIRGPELVSVKDFPYGMWLRA 244

BLAST of Lag0023057 vs. NCBI nr
Match: XP_023926510.1 (uncharacterized protein LOC112037926 [Quercus suber])

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-30
Identity = 72/177 (40.68%), Postives = 104/177 (58.76%), Query Frame = 0

Query: 43  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDF 102
           F    +  +IL+ GPW FDK LI L  P  SE+V D  F+  SFWVQ+HN+PL+R  R  
Sbjct: 77  FSNEVDAKKILSQGPWSFDKYLIGLYKPSESESVDDAKFDTASFWVQIHNLPLSRMNRAN 136

Query: 103 ALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLG-KAPGWCPVQY 162
           A ++G  LG VE++D        G  +R+RV L +++PL RG + +D+G   P W   QY
Sbjct: 137 AEIIGSSLGKVEQVDASPTGECRGRCVRIRVALNIEQPLCRG-RFVDMGATGPLWVSFQY 196

Query: 163 EKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVD--QYGEWLRAT---PFKTTLLRSK 214
           E++P FCY CG + H +++C        +L  +  QYG WLRAT   P +T ++ +K
Sbjct: 197 ERMPVFCYWCGLMNHDEKDCQLWTDSGETLEKESQQYGPWLRATMANPQQTQVVHTK 252

BLAST of Lag0023057 vs. NCBI nr
Match: XP_023888198.1 (uncharacterized protein LOC112000324 [Quercus suber])

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-30
Identity = 72/177 (40.68%), Postives = 104/177 (58.76%), Query Frame = 0

Query: 43  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDF 102
           F    +  +IL+ GPW FDK LI L  P  SE+V D  F+  SFWVQ+HN+PL+R  R  
Sbjct: 77  FSNEVDAKKILSQGPWSFDKYLIGLYKPSESESVDDAKFDTASFWVQIHNLPLSRMNRAN 136

Query: 103 ALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLG-KAPGWCPVQY 162
           A ++G  LG VE++D        G  +R+RV L +++PL RG + +D+G   P W   QY
Sbjct: 137 AEIIGSSLGKVEQVDASPTGECRGRCVRIRVALNIEQPLCRG-RFVDMGATGPLWVSFQY 196

Query: 163 EKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVD--QYGEWLRAT---PFKTTLLRSK 214
           E++P FCY CG + H +++C        +L  +  QYG WLRAT   P +T ++ +K
Sbjct: 197 ERMPVFCYWCGLMNHDEKDCRLWTDSGETLEKESQQYGPWLRATMANPQQTQVVHTK 252

BLAST of Lag0023057 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.1e-49
Identity = 95/248 (38.31%), Postives = 144/248 (58.06%), Query Frame = 0

Query: 1   MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK------------------ 60
           MDEI   W+H   T +E + +  +   P+L+A+ ++LCVV K                  
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 61  ---------------------FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPF 120
                                F+++ EK+R+L++GPW F+K+L+VL  P A+   +D+ F
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 121 NETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPL 180
           N  +FW+Q+HN+P    + + A +LG +LG VEEI+G G D W GP IR+RV + + KPL
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180

Query: 181 RRGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQIQGSSSLTVDQYGEWLR 210
           RRG KL +      WCP++YEKLPDFCY CG +GH  REC ++ +  ++ + +QYG+WLR
Sbjct: 181 RRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR 240

BLAST of Lag0023057 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.2e-38
Identity = 81/222 (36.49%), Postives = 116/222 (52.25%), Query Frame = 0

Query: 1   MDEIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK------------------ 60
           MD+I   W++ +L +EE   I+ +   P+L+ + IQLC VGK                  
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 61  ---------------------FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPF 120
                                F+TM EK R+ + GPW FDK+L++LV   A+   +D+  
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 121 NETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPL 180
           +  +FWVQ+H +     T+D A  LG +LG VEE+DG     W  P + +RV + + KPL
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

Query: 181 RRGFKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPK 184
           RRG K+        WCP++YE+LPDFCY CGC+GH  RE  K
Sbjct: 181 RRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIREYEK 222

BLAST of Lag0023057 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-30
Identity = 86/257 (33.46%), Postives = 118/257 (45.91%), Query Frame = 0

Query: 4   IAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGK--------------------- 63
           ++A W++ +LT+EE   +  N      S  E +LC++GK                     
Sbjct: 5   LSALWENFNLTKEETMEMAVNHTMVAESLAEGKLCLIGKLLSRRAVNIDVMRNVLHMVWK 64

Query: 64  ------------------FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNET 123
                             F +  EK R+   GPW F+KAL+VL    A  +V ++     
Sbjct: 65  LSGGLQVREIGEKLYIFQFESEVEKERVYQQGPWNFNKALLVLKNYDAFISVEEIKLEWC 124

Query: 124 SFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRG 183
           +FW+QVH++PL   T      +G+  G V EID  G     G  +R+R CL ++KPLRRG
Sbjct: 125 AFWIQVHDLPLGFMTESVGKAIGDSFGEVIEIDTCGDKVAWGKFLRIRACLNVNKPLRRG 184

Query: 184 FKLLDLGKAPGWCPVQYEKLPDFCYSCGCLGHVKRECPKQI--QGSSSLTVDQYGEWLRA 219
             L            +YEKLPDFCY CGCL H + EC K +  +  S     +YG WLRA
Sbjct: 185 MILTAPNGGKILVSFRYEKLPDFCYVCGCLNHTENECEKAVIMRRDSGKVKKEYGPWLRA 244

BLAST of Lag0023057 vs. ExPASy TrEMBL
Match: A0A5C7H3R2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023893 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-30
Identity = 71/204 (34.80%), Postives = 118/204 (57.84%), Query Frame = 0

Query: 3   EIAAKWQHLSLTEEEAKGIITNEHSPLLSAEEIQLCVVGKFRTMEEKARILANGPWMFDK 62
           ++A  +Q+LS+ EE+      +E   L   E++  C+VGK  T  ++ R+   GPW F  
Sbjct: 28  DLAKLYQNLSIAEEDRAIHEISEEDKLDGVEDVDQCLVGKVLT--DRNRVWFRGPWHFGN 87

Query: 63  ALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQLGMVEEIDGFGID 122
           +LI L  P  + ++  L FN+T+FW+Q+H +P+    R  A  + EQ+G   E+     +
Sbjct: 88  SLIALEKPVGTGSISQLMFNKTAFWIQIHEIPIMCMNRRTAKWMAEQIGEAVELPSESRE 147

Query: 123 CWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAP--GWCPVQYEKLPDFCYSCGCLGHVKRE 182
           CW G  +R++V + + KPL+R  + L LGK        ++YE+LP+FC++CG +GH  +E
Sbjct: 148 CW-GKFMRVKVRIDISKPLKRWLR-LKLGKTEEVTMVSLKYERLPEFCFTCGRIGHSNKE 207

Query: 183 CPKQIQGSSSL--TVDQYGEWLRA 203
           C  +    ++L  TV +YG WL+A
Sbjct: 208 CQDEEAKEATLEETVSKYGSWLKA 227

BLAST of Lag0023057 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.3e-30
Identity = 68/179 (37.99%), Postives = 103/179 (57.54%), Query Frame = 0

Query: 51  RILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDFALLLGEQL 110
           R++  GPW FDKALIVL  PC+S+N+ +L FN  +FW+ + ++P++   +  A+ LG  +
Sbjct: 93  RVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAI 152

Query: 111 GMVEEID----GFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPG-WCPVQYEKLP 170
           G   ++D    GF    W G  +R+RV + + KPLRRG K+   G   G W P+QYE+LP
Sbjct: 153 GNFVDVDCNEKGFS---W-GASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLP 212

Query: 171 DFCYSCGCLGHVKRECPKQIQGS--SSLTVDQYGEWLRATPFKTTLLRSKFGGAGSKAD 223
           DFCY CG +GH   +C  +   +   S    +YG WLR    K    + + G + ++ D
Sbjct: 213 DFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKGKSPARED 267

BLAST of Lag0023057 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 60.1 bits (144), Expect = 4.6e-09
Identity = 37/140 (26.43%), Postives = 55/140 (39.29%), Query Frame = 0

Query: 43  FRTMEEKARILANGPWMFDKALIVLVVPCASENVVDLPFNETSFWVQVHNVPLARQTRDF 102
           F++ E    IL  GPW F+  +   V+   ++   D  F    FW+Q+  +PL   T   
Sbjct: 66  FQSEESMFSILRRGPWSFNDWM--CVIQRWTKLHSDAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 103 ALLLGEQLGMVEEIDGFGIDCWTGPIIRLRVCLRLDKPLRRGFKLLDLGKAPGWCPVQYE 162
              +GE++G+                                F   +LG+       QYE
Sbjct: 126 ITSIGERMGL--------------------------------FLETNLGRDVSVLKFQYE 171

Query: 163 KLPDFCYSCGCLGHVKRECP 183
           KL +FC +CG L H   ECP
Sbjct: 186 KLKNFCTTCGMLSHDASECP 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149484.11.3e-4838.31uncharacterized protein LOC111017902 [Momordica charantia][more]
XP_022156711.11.7e-3736.49uncharacterized protein LOC111023555 [Momordica charantia][more]
KAF5464529.13.1e-3139.76hypothetical protein F2P56_014601 [Juglans regia][more]
XP_023926510.11.5e-3040.68uncharacterized protein LOC112037926 [Quercus suber][more]
XP_023888198.12.0e-3040.68uncharacterized protein LOC112000324 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D7656.1e-4938.31uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DVS48.2e-3836.49uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A1R3K8471.7e-3033.46Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1[more]
A0A5C7H3R22.2e-3034.80CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02389... [more]
A0A6J1DU556.3e-3037.99uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
AT3G42140.14.6e-0926.43zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 38..133
e-value: 9.2E-7
score: 28.5
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 139..183
e-value: 9.9E-12
score: 44.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..273
NoneNo IPR availablePANTHERPTHR31286:SF26BNAC07G15150D PROTEINcoord: 19..230
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 19..230
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 168..183
score: 10.147202
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 165..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0023057.1Lag0023057.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding