Lag0023005 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTTCTCCGACGACTTTCTGGTACGTGGACTAGTCTTCTCCTACGTCTTTCCGATATGTGGACGACCGCAAGGTCTGCCATGGCTCGAGTACCTCGCATGTAGAGAGTCCCCATTCGTTGCAGCGTCGCCATCGAAACTGCAGCGGTGGTCCTCTTCACCGTGGGCAATTTCTGCTTCCACATTTCGGCGTACAGACTTCAATCGGCGTCGATTTCTGGGAGAGGAGCCTTGGTGGAGCAGTGAGGTTCATTTTAATGGCGGGGTCGAAGGTGGAGAGAGTGAAGAGAAGAAGAGAAACGAGAGAGTGAAGAGAATAAGAGAAACAAACACTGGTTAGGAGGGCATTTTCGTAAATTTGACGTTTAGGCTACAACTTTTTGCTATTTTTGCAAATTCTTTTGCGGGCTGCTAAATGTGCAAATATTTTGGCCCAATTTGATAGATTTGCAACCGGTCCTAAAATGTTTTGCCAACTCTTGGATCTCATTAATCCATACACCATCTTCTAACAACGTATGTGAACTGCCATTGAGCATAGGTATCAAGCTTTGACAGTCAGACTCAATCACAAGAGATGGAAAAATTGACATAATAATTAATGCAATAAATAAACAAGCAATAACATAATCAATTATCGGTAAAACTCTTCACCTTCGAGATGCCTTCAACTTTTTCGGTGAGGATGTTGATTACCTCAGTGCGTCTGATTCAACTTCAAGAGGCAACGCCCTTTGATTGCAGGTACTTGGAATCGCTTTCAACACCTCCAAAATAGCTTTTGCTTCTAAAACCTTCACTGGCCAATTTCTGTGGATTTTTCGCATTCCGAGGCAGACGAGGGATCCTTCCGAGTCATGCACAACCCAACCCAGGCCTCCCTTTCCGAGCTTGTCGTTCCAGGTCGCATCTGTATTTACTCTCCAGCAGTTCGAGCTTGAATTCTTCTGATGGGCTTGACTCGAGACGCTCCCAATTCTTCTATGAGCTTGACTGGTCAGGTTTGCTTCTTCACTTTCCTTGATGTTGTTCTGAATATCTTGGAAAAATAATTTTGTTGTTGCTCCTTGGTTGTTTGCTACAATTTTGTAGCGAAGAGTTCCATGCCTTTCAAAGTATAATAGCTCCGATTGCTAATTCCTTTGTACTGAGCTTGTCTTCCATCCACCACCAAAAGTCTTTGGTTGTCCAATTTGGCCTGCACACAGAGAACAATTTGTAAGAATTTGGGATAAATTTTGACCACCCCTCTTTAGGGATTTTACATTCCCACATGAGATGGGTTGGAATTTAGGCTCGCTGTTGCTCGATCGACATGGAATTTAGGCATTGTAATCGTTTTTTTAACACAGATGTGCACTGTGTTGCATGAGAGCTTTGAATCTCCCTCATGGCCATGGCGATTTCGAATCGACTGATGCTTGTATCTCGCGGGAAGAGGGGCGTATTTTTTCGGCCCCCAACATCCCGTTTTGGTTTTTCCCTCTTCAAAGAGTAGGTGTAAACCGGTTAACTTTCGTTAATGCATTGATATTTTATTAAAAAAATAACATAATCAATTATCTTAAAAATTAAATTTTACAAAACGTGATTCATGTTAACCCTGGAGACGACAGAAGGTGAGATCTACTCTCTTGTTTCTTATTTGCAGCAGTGTGTCTAAAACTAAATTTCAAATGTATACAAAATTACATTAAAAACAAAAGGTGTTTTTCATTAATAATTATTCCATGTTTGAGAGTGACTTCTAGGTTATCCAGTAATATTTATTGTATTTTATAAATAATTTTATGACACTCATTGTGAAAATTTCGGCTGCTAAATAAAACAGTTGACTATGTTTTCTCTTAAAAGTATCACTGTTTAGCATTTATAAATGATTCCATTCTTGTTTGCCAAAGATCTGCAGAGTTGAGCGAAGAAAGAAAATTGGTAGGAGCTATTTCACTAATTTCATCTCTCTAATTCTTTTATCATTTGCAATGCGGGGTTCTTCAGGCGGAAATGATCTTGACGATTTACTTCGCTGCCTCTCTCTTCATTCCTCTAGCGACGATGATTCAAATTCAGATGATCTCATTCTCACTCCATCTTCATCCTCATACTCTCAAGCTCTAAATTTCACCATTCGAAACCTCAGATTCTCGGGGCCTAATGTCCCAAAGCCAGTCGCCATAATCAAACCATCACATCCTTCCCAAGTCCAGGCGGCCGTCATTTTCTGCAAAAATCACGGCCTCCACATCCGAATTCGGAGCGGCGGCCACGACTTCGAGGGTCTTTCTTACGTCGCCAACGTCCCCTTCGTGTTGATTGATTTGGCCAATCTCAATTCGGTAACCATCAACACCGAAGACAACACTGCGTGGGTTCAATCTGGGGCGAGCTTGGGTGAGCTCTATTACAAACTCGGCCAGAAGACCTCCAGTTTTGGTTTCCCGGCCGGGGTGCAGCCGAATGTGGGCGTTGGTGGGTTCCTTAGCGGCGGTGGGTACGGGCTGATGGTTAGAAAATATGGTCTTGGCGTGGACAATGTGGTGGATGCTCAGCTTGTGGATGCAAATGGAAGGCTTCTGGATAGAGAATCCATGGGGGAGGATTTGTTTTGGGCCATTAGAGGTGGTGGAGGAGGGAGCTTTGGGATTGTTTTGGCGTGGAAGTTGAAGTTGGTTCCAGTTCCTCCCATTGTTACGTCCTTTACGGCTTACAGAAGTTGGGACCAAAACTCCACCAAGTTGGTCCATAGGTGGCAGTACGTTGCCCCCGAGATTGATGAAAGACTGTTCATTGGCATCATGGTGACAGGTTTCTTTGACTTAACTATCCTTCCTAATCATTAG ATGAACTTCTCCGACGACTTTCTGGTACGTGGACTAGTCTTCTCCTACGTCTTTCCGATATGTGGACGACCGCAAGGTCTGCCATGGCTCGAGTACCTCGCATGTAGAGAGTCCCCATTCGTTGCAGCGTCGCCATCGAAACTGCAGCGGTGGTCCTCTTCACCGTGGGCAATTTCTGCTTCCACATTTCGGCGTACAGACTTCAATCGGCGTCGATTTCTGGGAGAGGAGCCTTGGTGGAGCAGTGAGGTTCATTTTAATGGCGGGGTCGAAGGTGGAGAGAGTGAAGAGAAGAAGAGAAACGAGAGAGTGAAGAGAATAAGAGAAACAAACACTGTGCGTCTGATTCAACTTCAAGAGGCAACGCCCTTTGATTGCAGACGAGGGATCCTTCCGAGTCATGCACAACCCAACCCAGGCCTCCCTTTCCGAGCTTGTCGTTCCAGGTCGCATCTGTATTTACTCTCCAGCAGTTCGAGCTTGAATTCTTCTGATGGGCTTGACTCGAGACGCTCCCAATTCTTCTATGAGCTTGACTGCGAAGAGTTCCATGCCTTTCAAAGTATAATAGCTCCGATTGCTAATTCCTTTGTACTGAGCTTGTCTTCCATCCACCACCAAAAGTCTTTGGTTGTCCAATTTGGCCTGCACACAGAGAACAATTTATGTGCACTGTGTTGCATGAGAGCTTTGAATCTCCCTCATGGCCATGGCGATTTCGAATCGACTGATGCTTGTATCTCGCGGGAAGAGGGGCGTATTTTTTCGGCCCCCAACATCCCGTTTTGGTTTTTCCCTCTTCAAAGAGTAGGTGTAAACCGAGTTGAGCGAAGAAAGAAAATTGGTAGGAGCTATTTCACTAATTTCATCTCTCTAATTCTTTTATCATTTGCAATGCGGGGTTCTTCAGGCGGAAATGATCTTGACGATTTACTTCGCTGCCTCTCTCTTCATTCCTCTAGCGACGATGATTCAAATTCAGATGATCTCATTCTCACTCCATCTTCATCCTCATACTCTCAAGCTCTAAATTTCACCATTCGAAACCTCAGATTCTCGGGGCCTAATGTCCCAAAGCCAGTCGCCATAATCAAACCATCACATCCTTCCCAAGTCCAGGCGGCCGTCATTTTCTGCAAAAATCACGGCCTCCACATCCGAATTCGGAGCGGCGGCCACGACTTCGAGGGTCTTTCTTACGTCGCCAACGTCCCCTTCGTGTTGATTGATTTGGCCAATCTCAATTCGGTAACCATCAACACCGAAGACAACACTGCGTGGGTTCAATCTGGGGCGAGCTTGGGTGAGCTCTATTACAAACTCGGCCAGAAGACCTCCAGTTTTGGTTTCCCGGCCGGGGTGCAGCCGAATGTGGGCGTTGGTGGGTTCCTTAGCGGCGGTGGGTACGGGCTGATGGTTAGAAAATATGGTCTTGGCGTGGACAATGTGGTGGATGCTCAGCTTGTGGATGCAAATGGAAGGCTTCTGGATAGAGAATCCATGGGGGAGGATTTGTTTTGGGCCATTAGAGGTGGTGGAGGAGGGAGCTTTGGGATTGTTTTGGCGTGGAAGTTGAAGTTGGTTCCAGTTCCTCCCATTGTTACGTCCTTTACGGCTTACAGAAGTTGGGACCAAAACTCCACCAAGTTGGTCCATAGGTGGCAGTACGTTGCCCCCGAGATTGATGAAAGACTGTTCATTGGCATCATGGTGACAGGTTTCTTTGACTTAACTATCCTTCCTAATCATTAG ATGAACTTCTCCGACGACTTTCTGGTACGTGGACTAGTCTTCTCCTACGTCTTTCCGATATGTGGACGACCGCAAGGTCTGCCATGGCTCGAGTACCTCGCATGTAGAGAGTCCCCATTCGTTGCAGCGTCGCCATCGAAACTGCAGCGGTGGTCCTCTTCACCGTGGGCAATTTCTGCTTCCACATTTCGGCGTACAGACTTCAATCGGCGTCGATTTCTGGGAGAGGAGCCTTGGTGGAGCAGTGAGGTTCATTTTAATGGCGGGGTCGAAGGTGGAGAGAGTGAAGAGAAGAAGAGAAACGAGAGAGTGAAGAGAATAAGAGAAACAAACACTGTGCGTCTGATTCAACTTCAAGAGGCAACGCCCTTTGATTGCAGACGAGGGATCCTTCCGAGTCATGCACAACCCAACCCAGGCCTCCCTTTCCGAGCTTGTCGTTCCAGGTCGCATCTGTATTTACTCTCCAGCAGTTCGAGCTTGAATTCTTCTGATGGGCTTGACTCGAGACGCTCCCAATTCTTCTATGAGCTTGACTGCGAAGAGTTCCATGCCTTTCAAAGTATAATAGCTCCGATTGCTAATTCCTTTGTACTGAGCTTGTCTTCCATCCACCACCAAAAGTCTTTGGTTGTCCAATTTGGCCTGCACACAGAGAACAATTTATGTGCACTGTGTTGCATGAGAGCTTTGAATCTCCCTCATGGCCATGGCGATTTCGAATCGACTGATGCTTGTATCTCGCGGGAAGAGGGGCGTATTTTTTCGGCCCCCAACATCCCGTTTTGGTTTTTCCCTCTTCAAAGAGTAGGTGTAAACCGAGTTGAGCGAAGAAAGAAAATTGGTAGGAGCTATTTCACTAATTTCATCTCTCTAATTCTTTTATCATTTGCAATGCGGGGTTCTTCAGGCGGAAATGATCTTGACGATTTACTTCGCTGCCTCTCTCTTCATTCCTCTAGCGACGATGATTCAAATTCAGATGATCTCATTCTCACTCCATCTTCATCCTCATACTCTCAAGCTCTAAATTTCACCATTCGAAACCTCAGATTCTCGGGGCCTAATGTCCCAAAGCCAGTCGCCATAATCAAACCATCACATCCTTCCCAAGTCCAGGCGGCCGTCATTTTCTGCAAAAATCACGGCCTCCACATCCGAATTCGGAGCGGCGGCCACGACTTCGAGGGTCTTTCTTACGTCGCCAACGTCCCCTTCGTGTTGATTGATTTGGCCAATCTCAATTCGGTAACCATCAACACCGAAGACAACACTGCGTGGGTTCAATCTGGGGCGAGCTTGGGTGAGCTCTATTACAAACTCGGCCAGAAGACCTCCAGTTTTGGTTTCCCGGCCGGGGTGCAGCCGAATGTGGGCGTTGGTGGGTTCCTTAGCGGCGGTGGGTACGGGCTGATGGTTAGAAAATATGGTCTTGGCGTGGACAATGTGGTGGATGCTCAGCTTGTGGATGCAAATGGAAGGCTTCTGGATAGAGAATCCATGGGGGAGGATTTGTTTTGGGCCATTAGAGGTGGTGGAGGAGGGAGCTTTGGGATTGTTTTGGCGTGGAAGTTGAAGTTGGTTCCAGTTCCTCCCATTGTTACGTCCTTTACGGCTTACAGAAGTTGGGACCAAAACTCCACCAAGTTGGTCCATAGGTGGCAGTACGTTGCCCCCGAGATTGATGAAAGACTGTTCATTGGCATCATGGTGACAGGTTTCTTTGACTTAACTATCCTTCCTAATCATTAG MNFSDDFLVRGLVFSYVFPICGRPQGLPWLEYLACRESPFVAASPSKLQRWSSSPWAISASTFRRTDFNRRRFLGEEPWWSSEVHFNGGVEGGESEEKKRNERVKRIRETNTVRLIQLQEATPFDCRRGILPSHAQPNPGLPFRACRSRSHLYLLSSSSSLNSSDGLDSRRSQFFYELDCEEFHAFQSIIAPIANSFVLSLSSIHHQKSLVVQFGLHTENNLCALCCMRALNLPHGHGDFESTDACISREEGRIFSAPNIPFWFFPLQRVGVNRVERRKKIGRSYFTNFISLILLSFAMRGSSGGNDLDDLLRCLSLHSSSDDDSNSDDLILTPSSSSYSQALNFTIRNLRFSGPNVPKPVAIIKPSHPSQVQAAVIFCKNHGLHIRIRSGGHDFEGLSYVANVPFVLIDLANLNSVTINTEDNTAWVQSGASLGELYYKLGQKTSSFGFPAGVQPNVGVGGFLSGGGYGLMVRKYGLGVDNVVDAQLVDANGRLLDRESMGEDLFWAIRGGGGGSFGIVLAWKLKLVPVPPIVTSFTAYRSWDQNSTKLVHRWQYVAPEIDERLFIGIMVTGFFDLTILPNH Homology
BLAST of Lag0023005 vs. NCBI nr
Match: KAG6607170.1 (Berberine bridge enzyme-like 26, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 443.0 bits (1138), Expect = 4.1e-120 Identity = 224/293 (76.45%), Postives = 251/293 (85.67%), Query Frame = 0
BLAST of Lag0023005 vs. NCBI nr
Match: XP_023525672.1 (berberine bridge enzyme-like 18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438.7 bits (1127), Expect = 7.7e-119 Identity = 222/294 (75.51%), Postives = 250/294 (85.03%), Query Frame = 0
BLAST of Lag0023005 vs. NCBI nr
Match: XP_022964765.1 (berberine bridge enzyme-like 26 [Cucurbita moschata]) HSP 1 Score: 433.3 bits (1113), Expect = 3.2e-117 Identity = 221/288 (76.74%), Postives = 248/288 (86.11%), Query Frame = 0
BLAST of Lag0023005 vs. NCBI nr
Match: XP_023521064.1 (berberine bridge enzyme-like 26 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 422.2 bits (1084), Expect = 7.5e-114 Identity = 211/267 (79.03%), Postives = 234/267 (87.64%), Query Frame = 0
BLAST of Lag0023005 vs. NCBI nr
Match: XP_038894010.1 (berberine bridge enzyme-like 18 isoform X1 [Benincasa hispida]) HSP 1 Score: 417.2 bits (1071), Expect = 2.4e-112 Identity = 205/289 (70.93%), Postives = 240/289 (83.04%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy Swiss-Prot
Match: Q9SVG5 (Berberine bridge enzyme-like 18 OS=Arabidopsis thaliana OX=3702 GN=At4g20820 PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 4.7e-79 Identity = 144/287 (50.17%), Postives = 205/287 (71.43%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy Swiss-Prot
Match: A0A2S1XB67 (O-acetylstemmadenine oxidase OS=Catharanthus roseus OX=4058 GN=ASO PE=1 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.4e-75 Identity = 144/283 (50.88%), Postives = 201/283 (71.02%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy Swiss-Prot
Match: Q93ZA3 (Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana OX=3702 GN=At1g30760 PE=1 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 9.3e-75 Identity = 137/284 (48.24%), Postives = 206/284 (72.54%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy Swiss-Prot
Match: Q9FKU8 (Berberine bridge enzyme-like 26 OS=Arabidopsis thaliana OX=3702 GN=At5g44400 PE=2 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 9.3e-75 Identity = 133/241 (55.19%), Postives = 182/241 (75.52%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy Swiss-Prot
Match: Q9FI25 (Berberine bridge enzyme-like 27 OS=Arabidopsis thaliana OX=3702 GN=At5g44410 PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 4.6e-74 Identity = 140/297 (47.14%), Postives = 203/297 (68.35%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy TrEMBL
Match: A0A6J1HLR7 (berberine bridge enzyme-like 26 OS=Cucurbita moschata OX=3662 GN=LOC111464766 PE=3 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117 Identity = 221/288 (76.74%), Postives = 248/288 (86.11%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy TrEMBL
Match: A0A6J1DHA5 (berberine bridge enzyme-like 27 OS=Momordica charantia OX=3673 GN=LOC111020467 PE=3 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 8.6e-108 Identity = 202/288 (70.14%), Postives = 237/288 (82.29%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy TrEMBL
Match: A0A6J1I038 (berberine bridge enzyme-like 18 OS=Cucurbita maxima OX=3661 GN=LOC111469264 PE=3 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 3.6e-106 Identity = 199/297 (67.00%), Postives = 237/297 (79.80%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy TrEMBL
Match: A0A6J1HP64 (berberine bridge enzyme-like 18 OS=Cucurbita moschata OX=3662 GN=LOC111464765 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 2.3e-105 Identity = 199/305 (65.25%), Postives = 240/305 (78.69%), Query Frame = 0
BLAST of Lag0023005 vs. ExPASy TrEMBL
Match: A0A6J1EVN7 (berberine bridge enzyme-like 18 OS=Cucurbita moschata OX=3662 GN=LOC111438506 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 4.0e-105 Identity = 197/292 (67.47%), Postives = 234/292 (80.14%), Query Frame = 0
BLAST of Lag0023005 vs. TAIR 10
Match: AT4G20820.1 (FAD-binding Berberine family protein ) HSP 1 Score: 297.0 bits (759), Expect = 3.4e-80 Identity = 144/287 (50.17%), Postives = 205/287 (71.43%), Query Frame = 0
BLAST of Lag0023005 vs. TAIR 10
Match: AT1G30760.1 (FAD-binding Berberine family protein ) HSP 1 Score: 282.7 bits (722), Expect = 6.6e-76 Identity = 137/284 (48.24%), Postives = 206/284 (72.54%), Query Frame = 0
BLAST of Lag0023005 vs. TAIR 10
Match: AT5G44400.1 (FAD-binding Berberine family protein ) HSP 1 Score: 282.7 bits (722), Expect = 6.6e-76 Identity = 133/241 (55.19%), Postives = 182/241 (75.52%), Query Frame = 0
BLAST of Lag0023005 vs. TAIR 10
Match: AT5G44410.1 (FAD-binding Berberine family protein ) HSP 1 Score: 280.4 bits (716), Expect = 3.3e-75 Identity = 140/297 (47.14%), Postives = 203/297 (68.35%), Query Frame = 0
BLAST of Lag0023005 vs. TAIR 10
Match: AT1G30700.1 (FAD-binding Berberine family protein ) HSP 1 Score: 279.3 bits (713), Expect = 7.3e-75 Identity = 139/282 (49.29%), Postives = 192/282 (68.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|