Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTCAGATCCGACATGAGCACTCCTCGGCCGATGGCCGAGGCCAAGCAGAAGCCCAATCACAAAAAGGTCCGCAAAAGTTCGCCGCTAAAGACAGCGTCAGGTATGTACACAGGGAATAATGACAGGAAAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCTATCCAAATGGCTAAAAGACGAAGCGACAAGGTACCGAGCCTTCGCTCTAACACTCACAGGTTTGGCAAGACAATGGTTTAGTAAGATCCCACGGAAGTCAATCGGTTCGTTTAAAGAATTGGCCCGAGCGTTTGTTACGCAATTCCTTGGGGCCCGGAGCCGATAGAAGCCTCAGACCAATTTGCTAACAGTAAAGCAGGGGCCCATGAAAGCTTGAAGGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTTGCCTTGACTGCTGTGATTTCAGGTTTGCAAGATGAAAGACTACTCAACTCGATCGGTGAGAGCCAGCCACGGACATACGAGGAATTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTACTGAGGTCCAAACAAGAAGAGAGAGAGTCCGAAGCCGGAAAGAGTCCTCGACCAATGACCGAGGCCGACCAGAGACCAGGAAGCCTCGGGTCGTGCGGAACCAAAAGCCGGGTTTGACAGGTGTACACCACTAACAACTCCACTTAAACAAGCCCTGACCACAATACAGGATACAAACCTAATGAAGTGCCCAGAAAAATTGAGGTCGGACCCAGATAGGAGGAATCAGAACAAGTACTGCATGTTCCACGGTGACTACGGTCACACTACCCGGGAGTGCATACAGTTGAGGGACGAGATAGAAGCCCTAATTCGAGAGGGTTACCTCAAGGAGTTTGTGGGGAATGGCAGAAGCTAG
mRNA sequence
ATGGAGGTCAGATCCGACATGAGCACTCCTCGGCCGATGGCCGAGGCCAAGCAGAAGCCCAATCACAAAAAGGTCCGCAAAAGTTCGCCGCTAAAGACAGCGTCAGGTATGTACACAGGGAATAATGACAGGAAAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCTATCCAAATGGCTAAAAGACGAAGCGACAAGAATTGGCCCGAGCGTTTGTTACGCAATTCCTTGGGGCCCGGAGCCGATAGAAGCCTCAGACCAATTTGCTAACAGTAAAGCAGGGGCCCATGAAAGCTTGAAGGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTTGCCTTGACTGCTGTGATTTCAGGTTTGCAAGATGAAAGACTACTCAACTCGATCGGTGAGAGCCAGCCACGGACATACGAGGAATTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTACTGAGGTCCAAACAAGAAGAGAGAGAGTCCGAAGCCGGAAAGAGTCCTCGACCAATGACCGAGGCCGACCAGAGACCAGGAAGCCTCGGGTCGTGCGGAACCAAAAGCCGGGATACAAACCTAATGAAGTGCCCAGAAAAATTGAGGTCGGACCCAGATAGGAGGAATCAGAACAAGTACTGCATGTTCCACGGTGACTACGGTCACACTACCCGGGAGTGCATACAGTTGAGGGACGAGATAGAAGCCCTAATTCGAGAGGGTTACCTCAAGGAGTTTGTGGGGAATGGCAGAAGCTAG
Coding sequence (CDS)
ATGGAGGTCAGATCCGACATGAGCACTCCTCGGCCGATGGCCGAGGCCAAGCAGAAGCCCAATCACAAAAAGGTCCGCAAAAGTTCGCCGCTAAAGACAGCGTCAGGTATGTACACAGGGAATAATGACAGGAAAAAGTCAGAGGCTCGGGCAAAGTCCGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCTATCCAAATGGCTAAAAGACGAAGCGACAAGAATTGGCCCGAGCGTTTGTTACGCAATTCCTTGGGGCCCGGAGCCGATAGAAGCCTCAGACCAATTTGCTAACAGTAAAGCAGGGGCCCATGAAAGCTTGAAGGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTATGACGATGGATTTGCCTTGACTGCTGTGATTTCAGGTTTGCAAGATGAAAGACTACTCAACTCGATCGGTGAGAGCCAGCCACGGACATACGAGGAATTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTACTGAGGTCCAAACAAGAAGAGAGAGAGTCCGAAGCCGGAAAGAGTCCTCGACCAATGACCGAGGCCGACCAGAGACCAGGAAGCCTCGGGTCGTGCGGAACCAAAAGCCGGGATACAAACCTAATGAAGTGCCCAGAAAAATTGAGGTCGGACCCAGATAGGAGGAATCAGAACAAGTACTGCATGTTCCACGGTGACTACGGTCACACTACCCGGGAGTGCATACAGTTGAGGGACGAGATAGAAGCCCTAATTCGAGAGGGTTACCTCAAGGAGTTTGTGGGGAATGGCAGAAGCTAG
Protein sequence
MEVRSDMSTPRPMAEAKQKPNHKKVRKSSPLKTASGMYTGNNDRKKSEARAKSEAEQGQKGRELSKWLKDEATRIGPSVCYAIPWGPEPIEASDQFANSKAGAHESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIGESQPRTYEEFMTRAQRYISAEELLRSKQEERESEAGKSPRPMTEADQRPGSLGSCGTKSRDTNLMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECIQLRDEIEALIREGYLKEFVGNGRS
Homology
BLAST of Lag0022928 vs. NCBI nr
Match:
XP_024041095.1 (uncharacterized protein LOC112098853 [Citrus clementina])
HSP 1 Score: 127.9 bits (320), Expect = 1.3e-25
Identity = 75/200 (37.50%), Postives = 114/200 (57.00%), Query Frame = 0
Query: 105 ESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIGESQPRTYEEFMTRAQRY 164
E+L+DYI R+NNE+ QV+GYDDG AL+ ++ GL+ +L S+ + P +Y E + RA++Y
Sbjct: 285 ETLRDYIRRYNNEITQVDGYDDGIALSGIMEGLRMGKLWWSVSKRPPTSYSEMLARAEKY 344
Query: 165 ISAEELLRSK-QEERESEAGKS------PRPMTEADQ-------RPGS----------LG 224
+AEE +++ QE+ ES GK R + DQ RPG L
Sbjct: 345 ANAEERFKNRNQEKGESTKGKKKKDDQRERRVVRPDQSLRRNQFRPGERSEVRDTRPRLA 404
Query: 225 SCGT--------------KSRDTNLMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECIQ 267
S T + R+ L + P ++++P RRN NKYC FH D+GH T EC +
Sbjct: 405 SQFTNFTELNTPREQILMQVRNPTLFRTPPPMKTNPSRRNPNKYCHFHKDHGHDTSECFE 464
BLAST of Lag0022928 vs. NCBI nr
Match:
XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])
HSP 1 Score: 125.9 bits (315), Expect = 5.1e-25
Identity = 70/184 (38.04%), Postives = 104/184 (56.52%), Query Frame = 0
Query: 105 ESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIGESQPRTYEEFMTRAQRY 164
ESL+DY+ RFN E LQVEG D +L A +SG++DE L S G+ P T+ E ++RAQRY
Sbjct: 288 ESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRY 347
Query: 165 ISAEELLRSKQE--------ERESEAGK----------------SPRPMTEADQRPGSLG 224
+SA E SK+E +RE K PR + +
Sbjct: 348 MSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIE 407
Query: 225 SCGTKSRDTNLMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECIQLRDEIEALIREGYL 265
+ +D L+K PE++++ +R++ +YC+FH D+GH T++C L++E+E LIR GYL
Sbjct: 408 QVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYL 467
BLAST of Lag0022928 vs. NCBI nr
Match:
XP_024024428.1 (uncharacterized protein LOC112092448 [Morus notabilis])
HSP 1 Score: 122.1 bits (305), Expect = 7.4e-24
Identity = 69/171 (40.35%), Postives = 100/171 (58.48%), Query Frame = 0
Query: 102 GAHESLKDYINRFNNEVLQVEGYDDGFALTAVISGL-QDERLLNSIGESQPRTYEEFMTR 161
G +ESLKD+I RF +V EG D AL +S + +D +G P Y+EF+TR
Sbjct: 145 GPNESLKDWIARFGEQVTATEGISDEVALMGALSSMKKDIPYSTDLGRRPPHAYQEFLTR 204
Query: 162 AQRYISAEELLRSKQEERESEAGKSPRPMTEADQRPGSLGSCGTKSRDTNL--MKCPEKL 221
AQ +I+AEE ++ + + + A + R + + G ++ ++L ++ P L
Sbjct: 205 AQGFINAEEAKKALKSKAATPAKEEVRQASSQNNGKKHRGPPQVQAEPSHLQVLRRPPPL 264
Query: 222 RSDPDRRNQNKYCMFHGDYGHTTRECIQLRDEIEALIREGYLKEFVGNGRS 270
+SDP RRNQNKYC FHG+ GHTT EC LRDE+E LIREG L E+ + R+
Sbjct: 265 KSDPARRNQNKYCRFHGESGHTTAECYDLRDEVERLIREGRLGEYRADRRN 315
BLAST of Lag0022928 vs. NCBI nr
Match:
XP_024047974.1 (uncharacterized protein LOC112101548 [Citrus clementina] >XP_024953918.1 uncharacterized protein LOC112498174 [Citrus sinensis])
HSP 1 Score: 120.2 bits (300), Expect = 2.8e-23
Identity = 72/199 (36.18%), Postives = 107/199 (53.77%), Query Frame = 0
Query: 105 ESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIGESQPRTYEEFMTRAQRY 164
ESL++YI R+N E QV+GYDDG AL+ ++ GLQ RL S+ ++ P TY E ++RA++Y
Sbjct: 127 ESLREYIQRYNAETTQVDGYDDGVALSGLMEGLQMGRLWWSVAKNPPSTYSEMLSRAEKY 186
Query: 165 ISAEELLRSKQEERESEAGKSPRPMTE-ADQRPG---------------SLGSCGTKSR- 224
+AEE +SK+ + E+ K+ + + D RPG L S +SR
Sbjct: 187 ANAEERFQSKKGREKGESSKNKKTKEDRRDIRPGRPDQASRKDQFRPWDQLSSQEPRSRP 246
Query: 225 ----------------------DTNLMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECI 265
++ L K P L+SD RRNQ KYC F+ D GH T EC
Sbjct: 247 PVQFTNYTELNAPREHILMQMKNSTLFKAPPPLKSDRSRRNQKKYCHFYKDVGHDTSECF 306
BLAST of Lag0022928 vs. NCBI nr
Match:
XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])
HSP 1 Score: 118.6 bits (296), Expect = 8.1e-23
Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 0
Query: 105 ESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIGESQPRTYEEFMTRAQRY 164
ESL DY+ RFN E LQVEG D +L A I G++DE L S G+ P T+ E ++RAQRY
Sbjct: 113 ESLHDYVTRFNKEKLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQRY 172
Query: 165 ISAEELLRSKQE--------ERESEAGK----------------SPRPMTEADQRPGSLG 224
+SA E SK+E +RE K P+ + L
Sbjct: 173 MSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTSTTVPLE 232
Query: 225 SCGTKSRDTNLMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECIQLRDEIEALIREGYL 265
+ ++ L+K PE++ + +R++ +YC+FH D+GH T++C L++E+E LI GYL
Sbjct: 233 QVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYL 292
BLAST of Lag0022928 vs. ExPASy TrEMBL
Match:
A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 2.5e-25
Identity = 70/184 (38.04%), Postives = 104/184 (56.52%), Query Frame = 0
Query: 105 ESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIGESQPRTYEEFMTRAQRY 164
ESL+DY+ RFN E LQVEG D +L A +SG++DE L S G+ P T+ E ++RAQRY
Sbjct: 288 ESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRY 347
Query: 165 ISAEELLRSKQE--------ERESEAGK----------------SPRPMTEADQRPGSLG 224
+SA E SK+E +RE K PR + +
Sbjct: 348 MSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIE 407
Query: 225 SCGTKSRDTNLMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECIQLRDEIEALIREGYL 265
+ +D L+K PE++++ +R++ +YC+FH D+GH T++C L++E+E LIR GYL
Sbjct: 408 QVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYL 467
BLAST of Lag0022928 vs. ExPASy TrEMBL
Match:
A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 3.9e-23
Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 0
Query: 105 ESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIGESQPRTYEEFMTRAQRY 164
ESL DY+ RFN E LQVEG D +L A I G++DE L S G+ P T+ E ++RAQRY
Sbjct: 113 ESLHDYVTRFNKEKLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQRY 172
Query: 165 ISAEELLRSKQE--------ERESEAGK----------------SPRPMTEADQRPGSLG 224
+SA E SK+E +RE K P+ + L
Sbjct: 173 MSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTSTTVPLE 232
Query: 225 SCGTKSRDTNLMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECIQLRDEIEALIREGYL 265
+ ++ L+K PE++ + +R++ +YC+FH D+GH T++C L++E+E LI GYL
Sbjct: 233 QVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYL 292
BLAST of Lag0022928 vs. ExPASy TrEMBL
Match:
A0A2N9FY65 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19967 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 2.0e-22
Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 0
Query: 79 VCYAIPW---GPEPIEASDQFANSKAGAHESLKDYINRFNNEVLQVEGYDDGFALTAVIS 138
+C A P GP I +SK G E+L+ Y+ RFN E L V+G DD LTA IS
Sbjct: 102 MCRAFPTTLKGPARIWFKKLTPSSKEG--ETLRSYLTRFNKETLLVDGADDKVILTAFIS 161
Query: 139 GLQDERLLNSIGESQPRTYEEFMTRAQRYISAEELLRSKQEERESEAGKSPRPMTEADQR 198
GLQ L S+ + P T E M AQR+++ EE L++ R+ +GK R AD
Sbjct: 162 GLQSGDFLFSVYKDPPSTMTEMMYEAQRHMNGEEALQA----RDQTSGKK-RKWEHADYH 221
Query: 199 PGSLGSCGTKSRDTNLMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECIQLRDEIEALI 258
+ R+ +K P KL ++PD+R ++KYC FH D+GH T +C L+ +IE LI
Sbjct: 222 ------IFMQIRNDPTLKWPGKLLTNPDKRPRDKYCRFHRDHGHNTEDCYDLKRQIEELI 281
Query: 259 REGYLKEFVGNGR 269
++G L+ FV G+
Sbjct: 282 KQGKLQRFVERGQ 281
BLAST of Lag0022928 vs. ExPASy TrEMBL
Match:
A0A6J1E1B3 (uncharacterized protein LOC111025521 OS=Momordica charantia OX=3673 GN=LOC111025521 PE=4 SV=1)
HSP 1 Score: 115.9 bits (289), Expect = 2.6e-22
Identity = 70/204 (34.31%), Postives = 108/204 (52.94%), Query Frame = 0
Query: 105 ESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIGESQPRTYEEFMTRAQRY 164
E+LK+Y+ RF E L+V D A+ ++GL DE L +GE P T+ E + +A++
Sbjct: 68 ETLKEYVTRFQEEQLKVAHCSDDSAMCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKV 127
Query: 165 ISAEELLRSK--QEERESEAGKSPRPMTEADQRPGSLGSCGTKSRD-------------- 224
I +ELLR+K + E++ + G++ + +AD + GS + S+
Sbjct: 128 IDGQELLRTKTGRPEKKIDQGRAGKDKGKADSKSKDKGSSSSSSQADYRRSDSSRNRSRP 187
Query: 225 ---------------TN--------LMKCPEKLRSDPDRRNQNKYCMFHGDYGHTTRECI 270
TN L+K P+KLR DP++RN++KYC FH D+GH T C
Sbjct: 188 YERYTPTTIPSSEILTNIEETGMEKLLKRPKKLRGDPEKRNKDKYCRFHRDHGHNTSNCW 247
BLAST of Lag0022928 vs. ExPASy TrEMBL
Match:
A0A2N9FCQ3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12446 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 3.3e-22
Identity = 72/212 (33.96%), Postives = 105/212 (49.53%), Query Frame = 0
Query: 88 EPIEASDQFANSKAGAHESLKDYINRFNNEVLQVEGYDDGFALTAVISGLQDERLLNSIG 147
+P+E + N K E+L+ Y+ RFN E L V+G DD LTA ISGLQ L S+
Sbjct: 282 DPLEPTTHLLNIKQKEGETLRSYLTRFNKETLLVDGADDKVVLTAFISGLQAGDFLFSVY 341
Query: 148 ESQPRTYEEFMTRAQRYISAEELLRSKQEE--RESEAGKSPRPMTEADQRPGSLGSCGTK 207
+ P T E M AQR+++ EE L ++ + ++ + RP D RP + + K
Sbjct: 342 KDPPSTMTEMMYEAQRHMNGEEALLARDQTVGKKRKWEHPDRPAEPHDTRPKAQRNRNRK 401
Query: 208 SRDTN-----------------------------LMKCPEKLRSDPDRRNQNKYCMFHGD 267
D N +K P KL +DPD+R ++KYC FH D
Sbjct: 402 HEDRNGRGFNERFNHFTPLNAPVDHIFMQIRNDPALKWPGKLLTDPDKRPRDKYCRFHRD 461
Query: 268 YGHTTRECIQLRDEIEALIREGYLKEFVGNGR 269
+GH T +C L+ +IE LI++G L+ FV G+
Sbjct: 462 HGHNTEDCYDLKRQIEELIKQGKLQRFVEKGQ 493
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_024041095.1 | 1.3e-25 | 37.50 | uncharacterized protein LOC112098853 [Citrus clementina] | [more] |
XP_022158830.1 | 5.1e-25 | 38.04 | uncharacterized protein LOC111025293 [Momordica charantia] | [more] |
XP_024024428.1 | 7.4e-24 | 40.35 | uncharacterized protein LOC112092448 [Morus notabilis] | [more] |
XP_024047974.1 | 2.8e-23 | 36.18 | uncharacterized protein LOC112101548 [Citrus clementina] >XP_024953918.1 unchara... | [more] |
XP_022142767.1 | 8.1e-23 | 36.96 | uncharacterized protein LOC111012805 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DWY0 | 2.5e-25 | 38.04 | uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1CNT2 | 3.9e-23 | 36.96 | uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A2N9FY65 | 2.0e-22 | 38.86 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19967 PE=4 SV=1 | [more] |
A0A6J1E1B3 | 2.6e-22 | 34.31 | uncharacterized protein LOC111025521 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A2N9FCQ3 | 3.3e-22 | 33.96 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12446 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |