Lag0022899 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022899
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase
Locationchr7: 40412429 .. 40415886 (+)
RNA-Seq ExpressionLag0022899
SyntenyLag0022899
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCGACGTGCAGTGCTCGTGTCCAACAGGGAGTACTAGAGAAATTGTCTGACCCAGGGAGTTTTACCATTCCTTGTAATTTTGGTACTTTTTCATGTAGAGCACTATGTGATCTGGGGGCTAGCATAAATATAATTCCTCTATCATTATGTAAAAAGCTTAACATAGGAGACATAAAATCTACTTCTGTTAGACTTCAGTTGGCTGACCAGTCTGTGGTTAGTCCATATGGGATTGTTGAGAATATTCTGATTAAAGTAGCACTACAACAAATTGGTCTTTTAATGTCGGACGTAAAAAACCACGCGTGGCCTTTAATGTCGCACATTTAAAAAAGATGCGGATTTTGCTGGGTTAAAATTTTCATTAGGCCTTTAATGTCGGGCTATTGTGTCCGACATTATATGTGACCGACATTAAAAAACTACCTTTAAATAGCATATTATGATCTATTTTCTCTCTCCACGAAAAAAACCCCACTTTTCCTCCCTTTGTTCTCTTTCAACAACGGCACTAGGGTTTTTTTCTTCTCCTCAAAGGCGTGACTTCCTTCCTCTCACCGGTGGTGCGATTTTGTTCTCCTCACCGGTGCGATTTTGTTCTCCTCACCGGCGCAGTTGGTTCTTCTTTGGTGCGTTTTTCTTCTTCTGTGGCGCGATTTGCTACCTCTCTCACCGTCGACAGCCGATTTCTCTCACCATCACCATTCCTCCTTCTTCTTGTTCGTTGCATGTGGGTTTTCTCCATGGCTACTCATGGGTTCCACGTTAGCTACGGGTTAATTCCATTTTTCATTGTGAGTTTTCTAATCTATGTTGCATCAGTCATTGGATCTTTGTTTGGACTGATTTTGTTGTTGTGGGTTGTTCTATTTTTCGATTTTTAAAGATTATTGTGCTTCCTTTTCGGGATTTATGTTTTGTATTTGTTGATCTCAGTGTTTTTACCATTTTGGGCGGTTTGAATGTGCCTTTTGAAATCATGAGTTTTTACATAGATACTGAAATAGAATGTTTACAGACTAATTTTCTTAGTTTACAAAAATTTTACAAAACTCCACCTGCCCCTTGCCTTGATTAAGTGGTGAACAAAATTATTCATGTTGTAAAGACCTCTAGTGTGCTTAATGCGGCTTATAATTCCAATACGCAAGAAATAATGAATGGTATGGTTTGTGAAAACTATTGATCTCATGCTTCATACTTTTGCAATTCTATTTTTTTTATTAAATCATCGATAATTGGTAAGCAAACAATAACAATGAATGGTCAAATGTCTCTTCATCTTTGTTACATAAGTAGCAAACTCAGGAGGACAAAAACCAATGAGGGAATTTGGTAAACTTGATTGCCCATCATATTGGGTTCCACAAATATGCACTCTTGGTTTTGGGTTCCACAAATATTCCTTCTTTTTTGATATCTTAACATAAGTTGAAAATTCAAACTTATTTATGTAGTCGGCTGCTTTTTCACTAACAACAGCACTACAGCTAGATTTGAAGTGATTTAATGGTGGGTTGAACTTCCTTCTCTTTCCTCCAGGGATCAGATATTTGAATTTATTTTTAGTAGAATTTATGAGATTTCGATCATTTTTTTATTTGCTTAGCTATACAAAAATGATCTTGATGTATCGTAAACTTTTGAGAAAGCCTATACAACAGTTATACATAGAAGATTGGGATTATATTGACATTTGCTTGCAGTAATATGAATATCTCCTTTTTTTTTGTCACACTTGTACTAATCATTTCTCTAACTCTGTATTCCATATATATTTACTGTTATACGGAAGAAAAGGCGGCACAATTGGTGAGTGGGTGAAGGTTGTCCAACCTATTCAGTTTCTTGAAGGATACAAAGATTTGTTGTTGTTATCAGAGGCCACGGGTTTACAGGTAAAAATCACACTGATAGCTTTCCTTTATCGGAGAACAATCTGAACGTGTTTCAATATTTAAGGACATTGCAACAAAATTTTTGTGGTATTGAAAAATTCTTAGCACTGATCTGATATATACATATTCAAATAAGGCAAAACGTCTGTTCAAGATGCCATTTTTAGCACTGATCCAAATATGCATGTTCTTCAGCAACCTGCTAAAGTAATATATTGAATTATCATACTGCTTTACTCTTTGGCAGTGTTAAGAATATTTGAACTTGTCAACCTCAAATCTCAGATAGTGGAGCTTCTTCAACATCTAAATCAGCAAAAGCTGATGGAATGCATTACAGTAACAAGGTATACTTATTTGTCGTAGCATAGGGTATTCAGACTTTTTGGTGCAATCTTTCTTCTCCATTAATCTCTAGCATTATAGGGACAATGCATGATTTCCTTAAAGTCTTTGCTGTAGGGATTATTCAAAATCTCCATAAGGACTAGTTCCATATCAGGTGGGAAACACCGGTTTGAAATGGGTTTGAAGTATAGGACGGAAAATTTTCTTCCGTTCTCCCCCTTTTTTTCCTTCCCATTTGAACAATCTGATAGGTATCTTTACTAATATCTGCTCTAAAGGATGGTTGCAGTGTAACAAATAGTTTAGGCCCTATTTGATAAAAAAAAAAAAAAATAGTTTTTGGTTTTTAAAAATGGTGCTTGTTTTCCCACAAACTCTTAGCCAAATTCCAAAAACAAAAATAAGTTTTTAAAAACTACTTTTTTTAGTTTTCAAACTTGGTTTGGATTTTGAAAATATTTGCAAAAGTAGGTAACAAAACAAAGAACCCATGAGTGAAAATAGTGTTTATAAGCTTAATTTTCAAGAACCAAAAACCAAAAATACTTGGTTAGCCAATTGGAAGGTTAGTTCTCCTCCTTTTGACTATATATAGCATGTACGCCCTGCCCTGCCTTCTGCCACCCTTTGTGGTCATGTTGGGGATCCTAATCCAACTTGTGGTTACCTGCTAACATGAGCTTGAGTACATTCTTTTGTTTAATTTTGCAAAATTTTTAATTCTATTTACCTTTTAGAATGTTTTGGATTTACTTGAGTACAATTCTCATGTTTTTATTTTTTGTATTTTTTTAATAGTTGTATATCAAATAGAATGGAAGCAACTGATAGCGAGCATAGCTAGCTATCTTTACTTATTTAATTTAGCTAGTCTTTTATGGTGTTTGGGTCATTTTATTGCACTTTAATGTTTATTTTGTAGGAAATGGTTGATTGGAGCTATAATGCGATATCAGAGTTAATCGGGTGCTCGGAGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAACGTCGAGACGCTATGATAGGAAGCGTCCCGACGCTACCGTTTTCCTTATTCAGAACGCGCGTTTAAGAGGCAGCGTCGCGACGCTGTCTTGA

mRNA sequence

TCGACGTGCAGTGCTCGTGTCCAACAGGGAGTACTAGAGAAATTGTCTGACCCAGGGAGTTTTACCATTCCTTGTAATTTTGGTACTTTTTCATGTAGAGCACTATGTGATCTGGGGGCTAGCATAAATATAATTCCTCTATCATTATGTAAAAAGCTTAACATAGGAGACATAAAATCTACTTCTGTTAGACTTCAGTTGGCTGACCAGTCTGTGGTTAGTCCATATGGGATTGTTGAGAATATTCTGATTAAAGTAGCACTACAACAAATTGGCGTGACTTCCTTCCTCTCACCGGTGGTGCGATTTTGTTCTCCTCACCGGTGCGATTTTGTTCTCCTCACCGGCGCAGTTGGTTCTTCTTTGGTGCGTTTTTCTTCTTCTGTGGCGCGATTTGCTACCTCTCTCACCGTCGACAGCCGATTTCTCTCACCATCACCATTCCTCCTTCTTCTTGTTCGTTGCATGTGGGTTTTCTCCATGGCTACTCATGGGTTCCACGTTAGCTACGGGTTAATTCCATTTTTCATTACCTCTAGTGTGCTTAATGCGGCTTATAATTCCAATACGCAAGAAATAATGAATGATAGTGGAGCTTCTTCAACATCTAAATCAGCAAAAGCTGATGGAATGCATTACAGTAACAAGGAAATGGTTGATTGGAGCTATAATGCGATATCAGAGTTAATCGGGTGCTCGGAGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAACGTCGAGACGCTATGATAGGAAGCGTCCCGACGCTACCGTTTTCCTTATTCAGAACGCGCGTTTAAGAGGCAGCGTCGCGACGCTGTCTTGA

Coding sequence (CDS)

CATCGACGTGCAGTGCTCGTGTCCAACAGGGAGTACTAGAGAAATTGTCTGACCCAGGGAGTTTTACCATTCCTTGTAATTTTGGTACTTTTTCATGTAGAGCACTATGTGATCTGGGGGCTAGCATAAATATAATTCCTCTATCATTATGTAAAAAGCTTAACATAGGAGACATAAAATCTACTTCTGTTAGACTTCAGTTGGCTGACCAGTCTGTGGTTAGTCCATATGGGATTGTTGAGAATATTCTGATTAAAGTAGCACTACAACAAATTGGCGTGACTTCCTTCCTCTCACCGGTGGTGCGATTTTGTTCTCCTCACCGGTGCGATTTTGTTCTCCTCACCGGCGCAGTTGGTTCTTCTTTGGTGCGTTTTTCTTCTTCTGTGGCGCGATTTGCTACCTCTCTCACCGTCGACAGCCGATTTCTCTCACCATCACCATTCCTCCTTCTTCTTGTTCGTTGCATGTGGGTTTTCTCCATGGCTACTCATGGGTTCCACGTTAGCTACGGGTTAATTCCATTTTTCATTACCTCTAGTGTGCTTAATGCGGCTTATAATTCCAATACGCAAGAAATAATGAATGATAGTGGAGCTTCTTCAACATCTAAATCAGCAAAAGCTGATGGAATGCATTACAGTAACAAGGAAATGGTTGATTGGAGCTATAATGCGATATCAGAGTTAATCGGGTGCTCGGAGCGTGAAAAGATGCAAAGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATATCAGATTAGGCGCGTAAAGCTTACAACGTCGAGACGCTATGATAGGAAGCGTCCCGACGCTACCGTTTTCCTTATTCAGAACGCGCGTTTAAGAGGCAGCGTCGCGACGCTGTCTTGA

Protein sequence

STCSARVQQGVLEKLSDPGSFTIPCNFGTFSCRALCDLGASINIIPLSLCKKLNIGDIKSTSVRLQLADQSVVSPYGIVENILIKVALQQIGVTSFLSPVVRFCSPHRCDFVLLTGAVGSSLVRFSSSVARFATSLTVDSRFLSPSPFLLLLVRCMWVFSMATHGFHVSYGLIPFFITSSVLNAAYNSNTQEIMNDSGASSTSKSAKADGMHYSNKEMVDWSYNAISELIGCSEREKMQRNEKSKSGEKSNLGQQQASVETLALERLDAHIPYQIRRVKLTTSRRYDRKRPDATVFLIQNARLRGSVATLS
Homology
[Close]
BLAST of Lag0022899 vs. NCBI nr
Match: XP_010906452.1 (uncharacterized protein LOC105033389 [Elaeis guineensis])

HSP 1 Score: 106.7 bits (265), Expect = 3.7e-19
Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = 0 

Query: 3   CSARVQQGVLEKLSDPGSFTIPCNFGTFS-CRALCDLGASINIIPLSLCKKLNIGDIKST 62
           CSA +Q  +  KL DPGSFTIPCN G     +ALCDLGASIN++PLS+ +KL +GD+K T
Sbjct: 148 CSAIIQNKLPSKLKDPGSFTIPCNIGNIEFTKALCDLGASINLMPLSVFRKLGLGDVKPT 207

Query: 63  SVRLQLADQSVVSPYGIVENILIKV 87
           SV LQLAD+SV  P GIVE++L+K+
Sbjct: 208 SVSLQLADRSVTYPKGIVEDVLVKM 232

[Close]
BLAST of Lag0022899 vs. NCBI nr
Match: XP_014506502.2 (uncharacterized protein LOC106766276 [Vigna radiata var. radiata])

HSP 1 Score: 105.9 bits (263), Expect = 6.3e-19
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 3   CSARVQQGVLEKLSDPGSFTIPCNFGTFSC-RALCDLGASINIIPLSLCKKLNIGDIKST 62
           CSA +QQ +  KL DPGSF IPC  G     +ALCDLGASIN++PLS+ K+L IGD+K T
Sbjct: 75  CSAIIQQKLPPKLKDPGSFVIPCEIGNIMVGKALCDLGASINLMPLSIFKRLGIGDVKPT 134

Query: 63  SVRLQLADQSVVSPYGIVENILIKV 87
            + LQLAD+S+  PYGIVE++L+KV
Sbjct: 135 MITLQLADRSMTYPYGIVEDVLVKV 159

[Close]
BLAST of Lag0022899 vs. NCBI nr
Match: KAG9450476.1 (hypothetical protein H6P81_010441 [Aristolochia fimbriata])

HSP 1 Score: 105.9 bits (263), Expect = 6.3e-19
Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 0 

Query: 2   TCSARVQQGVLEKLSDPGSFTIPCNFGTFSC-RALCDLGASINIIPLSLCKKLNIGDIKS 61
           +CSA ++  +  KL DPGSFTIPC FG F   + LCDLGASIN++PLS+C+KLN+G++K 
Sbjct: 552 SCSAILKNQLPTKLKDPGSFTIPCEFGNFKFNKVLCDLGASINLMPLSICRKLNLGELKE 611

Query: 62  TSVRLQLADQSVVSPYGIVENILIKVALQQIGVTSFLSPVVRFCSPHRCDFVLL 115
           T++ LQ AD+S   P G++E++L+++         F+ P         CDFV+L
Sbjct: 612 TNIMLQFADRSTKKPNGLIEDVLVRIG-------KFIYP---------CDFVVL 649

[Close]
BLAST of Lag0022899 vs. NCBI nr
Match: KAG9442207.1 (hypothetical protein H6P81_018061 [Aristolochia fimbriata])

HSP 1 Score: 105.5 bits (262), Expect = 8.3e-19
Identity = 54/113 (47.79%), Postives = 74/113 (65.49%), Query Frame = 0 

Query: 3   CSARVQQGVLEKLSDPGSFTIPCNFGTFSC-RALCDLGASINIIPLSLCKKLNIGDIKST 62
           CSA ++  +  KL DPGSFTIPC FG F   + LCDLGASIN++PLS+CKKLN+G++K T
Sbjct: 173 CSAILKNQLPTKLKDPGSFTIPCEFGNFKFNKVLCDLGASINLMPLSICKKLNLGELKET 232

Query: 63  SVRLQLADQSVVSPYGIVENILIKVALQQIGVTSFLSPVVRFCSPHRCDFVLL 115
           ++ LQ AD S   P G++E++L++V         F+ P         CDFV+L
Sbjct: 233 NIMLQFADISTKKPNGLIEDVLVRVG-------KFIYP---------CDFVVL 269

[Close]
BLAST of Lag0022899 vs. NCBI nr
Match: KYP58627.1 (Retrovirus-related Pol polyprotein from transposon opus [Cajanus cajan])

HSP 1 Score: 105.5 bits (262), Expect = 8.3e-19
Identity = 50/85 (58.82%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 3  CSARVQQGVLEKLSDPGSFTIPCNFGTFS-CRALCDLGASINIIPLSLCKKLNIGDIKST 62
          CSA +QQ +  KL DPGSF IPC  G     +ALCDLGASIN++PLS+ K+L IG++K T
Sbjct: 6  CSAIIQQKLPPKLKDPGSFVIPCEIGNLMVSKALCDLGASINLMPLSIFKRLGIGEVKPT 65

Query: 63 SVRLQLADQSVVSPYGIVENILIKV 87
           + LQLAD+SV  PYG+VE++L+KV
Sbjct: 66 MITLQLADRSVTCPYGVVEDVLVKV 90

[Close]
BLAST of Lag0022899 vs. ExPASy TrEMBL
Match: A0A6I9QBH1 (uncharacterized protein LOC105033389 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105033389 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-19
Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = 0 

Query: 3   CSARVQQGVLEKLSDPGSFTIPCNFGTFS-CRALCDLGASINIIPLSLCKKLNIGDIKST 62
           CSA +Q  +  KL DPGSFTIPCN G     +ALCDLGASIN++PLS+ +KL +GD+K T
Sbjct: 148 CSAIIQNKLPSKLKDPGSFTIPCNIGNIEFTKALCDLGASINLMPLSVFRKLGLGDVKPT 207

Query: 63  SVRLQLADQSVVSPYGIVENILIKV 87
           SV LQLAD+SV  P GIVE++L+K+
Sbjct: 208 SVSLQLADRSVTYPKGIVEDVLVKM 232

[Close]
BLAST of Lag0022899 vs. ExPASy TrEMBL
Match: A0A1S3UKE1 (uncharacterized protein LOC106766276 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766276 PE=4 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-19
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 3   CSARVQQGVLEKLSDPGSFTIPCNFGTFSC-RALCDLGASINIIPLSLCKKLNIGDIKST 62
           CSA +QQ +  KL DPGSF IPC  G     +ALCDLGASIN++PLS+ K+L IGD+K T
Sbjct: 75  CSAIIQQKLPPKLKDPGSFVIPCEIGNIMVGKALCDLGASINLMPLSIFKRLGIGDVKPT 134

Query: 63  SVRLQLADQSVVSPYGIVENILIKV 87
            + LQLAD+S+  PYGIVE++L+KV
Sbjct: 135 MITLQLADRSMTYPYGIVEDVLVKV 159

[Close]
BLAST of Lag0022899 vs. ExPASy TrEMBL
Match: A0A151SV10 (Retrovirus-related Pol polyprotein from transposon opus OS=Cajanus cajan OX=3821 GN=KK1_014042 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-19
Identity = 50/85 (58.82%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 3  CSARVQQGVLEKLSDPGSFTIPCNFGTFS-CRALCDLGASINIIPLSLCKKLNIGDIKST 62
          CSA +QQ +  KL DPGSF IPC  G     +ALCDLGASIN++PLS+ K+L IG++K T
Sbjct: 6  CSAIIQQKLPPKLKDPGSFVIPCEIGNLMVSKALCDLGASINLMPLSIFKRLGIGEVKPT 65

Query: 63 SVRLQLADQSVVSPYGIVENILIKV 87
           + LQLAD+SV  PYG+VE++L+KV
Sbjct: 66 MITLQLADRSVTCPYGVVEDVLVKV 90

[Close]
BLAST of Lag0022899 vs. ExPASy TrEMBL
Match: A0A0S3QWS7 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G023800 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.2e-19
Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 0 

Query: 3   CSARVQQGVLEKLSDPGSFTIPCNFGTFSC-RALCDLGASINIIPLSLCKKLNIGDIKST 62
           CSA +QQ +  KL DPGSF IPC  G  +  +ALCDLGASIN++PLS+ K+L IG++K T
Sbjct: 115 CSAIIQQKLPPKLKDPGSFVIPCEIGNITVGKALCDLGASINLMPLSIFKRLGIGEVKPT 174

Query: 63  SVRLQLADQSVVSPYGIVENILIKV 87
            + LQLAD+S+  PYGIVE++L+KV
Sbjct: 175 MITLQLADRSMTYPYGIVEDVLVKV 199

[Close]
BLAST of Lag0022899 vs. ExPASy TrEMBL
Match: A0A6J1DTZ8 (uncharacterized protein LOC111023979 OS=Momordica charantia OX=3673 GN=LOC111023979 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.8e-19
Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 0 

Query: 4   SARVQQGVLEKLSDPGSFTIPCNFGTFSCRALCDLGASINIIPLSLCKKLNIGDIKSTSV 63
           + R+Q+ + +KL D   F+IPCN G++  R LCDLG +IN  PLSLC+KLNIG+IK TS+
Sbjct: 149 NVRIQRKLPQKLKDLEGFSIPCNLGSYGFRGLCDLGVNINSTPLSLCRKLNIGEIKRTSI 208

Query: 64  RLQLADQSVVSPYGIVENILIKV 87
            +QL D+S   PYG++EN+LIKV
Sbjct: 209 MIQLVDRSTAHPYGVIENVLIKV 231

The following BLAST results are available for this feature:
BLAST of Lag0022899 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_010906452.13.7e-1961.18uncharacterized protein LOC105033389 [Elaeis guineensis][more]
XP_014506502.26.3e-1960.00uncharacterized protein LOC106766276 [Vigna radiata var. radiata][more]
KAG9450476.16.3e-1945.61hypothetical protein H6P81_010441 [Aristolochia fimbriata][more]
KAG9442207.18.3e-1947.79hypothetical protein H6P81_018061 [Aristolochia fimbriata][more]
KYP58627.18.3e-1958.82Retrovirus-related Pol polyprotein from transposon opus [Cajanus cajan][more]
BLAST of Lag0022899 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0022899 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6I9QBH11.8e-1961.18uncharacterized protein LOC105033389 OS=Elaeis guineensis var. tenera OX=51953 G... [more]
A0A1S3UKE13.1e-1960.00uncharacterized protein LOC106766276 OS=Vigna radiata var. radiata OX=3916 GN=LO... [more]
A0A151SV104.0e-1958.82Retrovirus-related Pol polyprotein from transposon opus OS=Cajanus cajan OX=3821... [more]
A0A0S3QWS75.2e-1958.82Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G... [more]
A0A6J1DTZ86.8e-1955.42uncharacterized protein LOC111023979 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Lag0022899 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 4..113
e-value: 5.1E-13
score: 50.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..255
NoneNo IPR availablePANTHERPTHR33067FAMILY NOT NAMEDcoord: 3..87
NoneNo IPR availablePANTHERPTHR33067:SF13ASPARTYL PROTEASEcoord: 3..87
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 23..91
e-value: 3.18658E-9
score: 51.1832

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022899.1Lag0022899.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008233 peptidase activity