Lag0022865 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022865
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptioncell wall / vacuolar inhibitor of fructosidase 2-like
Locationchr7: 39689818 .. 39690351 (+)
RNA-Seq ExpressionLag0022865
SyntenyLag0022865
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGTGGAAAGTTTATCTGGTTTCTCTCTTTTCCTTCTTTTCAGCAGTTTGTGTCTCATTGCTCAAGCTGCCGTTGCAAATGATTTTGTCAAGGACACTTGTAATAAATACAAAGACTTGAGCAAAATATGCATCGATGTGATAGATTCAGATCCTCGCCAAGATCTAAAATCAAACTTATCCGGATTCTTAGCCATTTTTATAAACCATTCTATCGCGAACACCAACAACAATCGTTTCTACCTTTTGGACCAGATCAAGAGGCCGGAGTTAGACAACAAGACACGACAAGTCTTCAACAAATGTTTAGGTCATTACGAGATTTGCAGAAATATTCTTACTTCGTCGTTAGAAGTATTGTTAAGGGACCATGATGTAAAGTTGGATCGGAATATGGCAGATGCATATGCCCTAATCACAGAGTGTGAAAATGAATTTACAGGTACACCCGAGCCACCATCTTGGTCGTCTCGTTGTCTCGAATTATTTCGACTTTTAAAGCTTTCAATGATGACTGCAAATCTCTTATAA

mRNA sequence

ATGAGGGTGGAAAGTTTATCTGGTTTCTCTCTTTTCCTTCTTTTCAGCAGTTTGTGTCTCATTGCTCAAGCTGCCGTTGCAAATGATTTTGTCAAGGACACTTGTAATAAATACAAAGACTTGAGCAAAATATGCATCGATGTGATAGATTCAGATCCTCGCCAAGATCTAAAATCAAACTTATCCGGATTCTTAGCCATTTTTATAAACCATTCTATCGCGAACACCAACAACAATCGTTTCTACCTTTTGGACCAGATCAAGAGGCCGGAGTTAGACAACAAGACACGACAAGTCTTCAACAAATGTTTAGGTCATTACGAGATTTGCAGAAATATTCTTACTTCGTCGTTAGAAGTATTGTTAAGGGACCATGATGTAAAGTTGGATCGGAATATGGCAGATGCATATGCCCTAATCACAGAGTGTGAAAATGAATTTACAGGTACACCCGAGCCACCATCTTGGTCGTCTCGTTGTCTCGAATTATTTCGACTTTTAAAGCTTTCAATGATGACTGCAAATCTCTTATAA

Coding sequence (CDS)

ATGAGGGTGGAAAGTTTATCTGGTTTCTCTCTTTTCCTTCTTTTCAGCAGTTTGTGTCTCATTGCTCAAGCTGCCGTTGCAAATGATTTTGTCAAGGACACTTGTAATAAATACAAAGACTTGAGCAAAATATGCATCGATGTGATAGATTCAGATCCTCGCCAAGATCTAAAATCAAACTTATCCGGATTCTTAGCCATTTTTATAAACCATTCTATCGCGAACACCAACAACAATCGTTTCTACCTTTTGGACCAGATCAAGAGGCCGGAGTTAGACAACAAGACACGACAAGTCTTCAACAAATGTTTAGGTCATTACGAGATTTGCAGAAATATTCTTACTTCGTCGTTAGAAGTATTGTTAAGGGACCATGATGTAAAGTTGGATCGGAATATGGCAGATGCATATGCCCTAATCACAGAGTGTGAAAATGAATTTACAGGTACACCCGAGCCACCATCTTGGTCGTCTCGTTGTCTCGAATTATTTCGACTTTTAAAGCTTTCAATGATGACTGCAAATCTCTTATAA

Protein sequence

MRVESLSGFSLFLLFSSLCLIAQAAVANDFVKDTCNKYKDLSKICIDVIDSDPRQDLKSNLSGFLAIFINHSIANTNNNRFYLLDQIKRPELDNKTRQVFNKCLGHYEICRNILTSSLEVLLRDHDVKLDRNMADAYALITECENEFTGTPEPPSWSSRCLELFRLLKLSMMTANLL
Homology
BLAST of Lag0022865 vs. NCBI nr
Match: XP_022137307.1 (uncharacterized protein LOC111008804 [Momordica charantia])

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-36
Identity = 84/158 (53.16%), Postives = 109/158 (68.99%), Query Frame = 0

Query: 21  IAQAAVANDFVKDTCNKY-KDLSKICIDVIDSDPRQDLKSNLSGFLAIFINHSIANTNNN 80
           + + +VAN FV +TCNK+ ++  K+CIDVIDSDP QDLK NLSG LAIFINHSI N  +N
Sbjct: 4   VEKLSVANSFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDN 63

Query: 81  RFYLLDQIKRPELDNKTRQVFNKCLGHYEICRNILTSSLEVLLRDHDVKLDRNMADAYAL 140
             YL++Q+KR +LD   R  FN C+  YE   +IL SSLE LL++    L   ++DA+  
Sbjct: 64  HLYLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSLEALLKNDKDDLGLILSDAFDK 123

Query: 141 ITECENEFTGTPEPPSWSSRCLELFRLLKLSMMTANLL 178
           I  CE++F  TPEPPSW +  L L +LL LSM TANL+
Sbjct: 124 IVACEDDFESTPEPPSWLAHYLPLRKLLALSMGTANLI 161

BLAST of Lag0022865 vs. NCBI nr
Match: KAG6572152.1 (Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118.2 bits (295), Expect = 7.0e-23
Identity = 62/153 (40.52%), Postives = 98/153 (64.05%), Query Frame = 0

Query: 28  NDFVKDTCNK--YKDLSKICIDVIDSDPRQDLKSNLSGFLAIFINHSIANTNNNRFYLLD 87
           N+F  DTCN+  ++ L K+CI  +DS+PR+DLKSNL+G L IF+NH+I+N  +N  +L  
Sbjct: 153 NNFAHDTCNRFQFEQLYKLCIPEVDSEPREDLKSNLTGILIIFVNHTISNFKDNVMFLQR 212

Query: 88  QIKRPELDNKTRQVFNKCLGHYEICRNILTSSLEVLLRDHDVKLDRNMADAYA-LITECE 147
           +IK  +L+ KT+++++ CL ++E     L  S+ VLL +    +    A + A  +TEC 
Sbjct: 213 EIKSGKLNGKTKEMYDTCLENFERGTTDLQQSMHVLLTETGKDIYGLPALSVASYVTECV 272

Query: 148 NEFTGTPEPPSWSSRCLELFRLLKLSMMTANLL 178
           ++F G P+PP W SR     +LL+L + T NL+
Sbjct: 273 DDFEGVPKPPEWQSRYNTSNKLLELILGTCNLM 305

BLAST of Lag0022865 vs. NCBI nr
Match: KAG6599036.1 (hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-22
Identity = 62/152 (40.79%), Postives = 91/152 (59.87%), Query Frame = 0

Query: 28  NDFVKDTCNKYKDLSKICIDVIDSDPRQDLKSNLSGFLAIFINHSIANTNNNRFYLLDQI 87
           NDF++DTCN+ +D   +CI VIDSDPR+DLK N   FL IFIN ++    ++  YLL+Q 
Sbjct: 5   NDFIQDTCNRTEDFKDLCISVIDSDPREDLKLNSMDFLVIFINRTLQVIIDDHSYLLNQT 64

Query: 88  KRPELDNKTRQVFNKCLGHYEICRNILTSSL-EVLLRDHDVKLDRNMADAYALITECENE 147
              ELDN+TR +F  C+  Y++ ++ L   L E LL+  +  L+  +      +  C+N+
Sbjct: 65  LNEELDNRTRHIFMGCMTLYQMSKDSLRVLLNEELLKQPNADLNMKLQQIEGYLDLCQND 124

Query: 148 FTG-TPEPPSWSSRCLELFRLLKLSMMTANLL 178
           F G TP P +W+SR   +  LL LS    NL+
Sbjct: 125 FEGFTPTPSTWTSRYDYVISLLILSFRMMNLI 156

BLAST of Lag0022865 vs. NCBI nr
Match: KAG6572380.1 (ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-22
Identity = 62/152 (40.79%), Postives = 95/152 (62.50%), Query Frame = 0

Query: 29  DFVKDTCNK--YKDLSKICIDVIDSDPRQDLKSNLSGFLAIFINHSIANTNNNRFYLLDQ 88
           +FV DTCNK  Y +L K+CI  IDSDPR+DLKSNL+GFL IF+NH+I+N N+N  +L  +
Sbjct: 14  NFVHDTCNKFQYDELYKVCIPEIDSDPREDLKSNLTGFLIIFVNHTISNFNDNIVFLQRE 73

Query: 89  IKRPELDNKTRQVFNKCLGHYEICRNILTSSLEVLLRDHDVKL-DRNMADAYALITECEN 148
           I+  +L+ +T+ ++N CL  + +  + L  S+ +LL      + +    D    I+ C +
Sbjct: 74  IQSGKLNAETKLMYNTCLKAFGMGYSNLQESMHILLTQPGTNVYELPTMDVDKRISTCVD 133

Query: 149 EFTGTPEPPSWSSRCLELFRLLKLSMMTANLL 178
           +F G P PP W SR    + L+ L + T+NL+
Sbjct: 134 DFDGEPIPPEWQSRYNTSWNLVALMVETSNLI 165

BLAST of Lag0022865 vs. NCBI nr
Match: KAA0055284.1 (putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative invertase inhibitor [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 5.9e-22
Identity = 64/173 (36.99%), Postives = 97/173 (56.07%), Query Frame = 0

Query: 9   FSLFLLFSSLCLIAQA---AVANDFVKDTCNKYKDLSKICIDVIDSDPRQDLKSNLSGFL 68
           F + L   SLC++ +A      NDFV+ TCN+  +L  +C+  I S+PR DLKSNL+G L
Sbjct: 7   FLVLLCILSLCMLTKADQNTTINDFVRHTCNRTHELKNLCLSQISSEPRNDLKSNLTGLL 66

Query: 69  AIFINHSIANTNNNRFYLLDQIKRPELDNKTRQVFNKCLGHYEICRNILTSSLEVLLRDH 128
            IF+N SI+N  N+  +L  +I   ++   T+ +   CL +++I    L  ++E+L    
Sbjct: 67  MIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT 126

Query: 129 DVKLDR-NMADAYALITECENEFTGTPEPPSWSSRCLELFRLLKLSMMTANLL 178
               ++  + +   L  EC ++F GTP PP W SR    F LLKLSM   NL+
Sbjct: 127 GYDAEQLPVGNVGNLAVECFDDFEGTPVPPEWQSRYNASFALLKLSMAMINLI 179

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022137307.11.9e-3653.16uncharacterized protein LOC111008804 [Momordica charantia][more]
KAG6572152.17.0e-2340.52Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6599036.14.5e-2240.79hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6572380.14.5e-2240.79ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita arg... [more]
KAA0055284.15.9e-2236.99putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative inv... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainSMARTSM00856PMEI_2coord: 26..173
e-value: 0.0082
score: 18.3
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 29..153
e-value: 7.5E-9
score: 36.1
IPR006501Pectinesterase inhibitor domainTIGRFAMTIGR01614TIGR01614coord: 9..173
e-value: 7.2E-20
score: 69.0
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40Invertase/pectin methylesterase inhibitor family proteincoord: 26..177
e-value: 8.5E-14
score: 53.7
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 28..177

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022865.1Lag0022865.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004857 enzyme inhibitor activity