Lag0022757 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTCTCTTCTTCAAAGATCAGTACTTCTGCAGATATTACGCAACACTCCAAGATTATCAACCCGGGAAACAAGATCAATACCGTCAAGCTTGACGAAGAAAATTTCCTTCTATGGAAATTACAAGTTCTCACTGTATTATGCGAGCACAGGTTGACGAAATACATCGAGGAAGACGCTGAAATTCCGGACAACTTTCTTCCCTCAAATGATACTTCTTCTTCTGTGAAATTACCAAATCCAGCATATGATCTTTGGGTTCGTCAAGATAGCTTGATCACAGCTTGGCTTTTTGGCTCTATGTCGAATTCCCTTATCTCCGAAATGCTTGACTGTGACAAAGAGTGTGAGGTCTGGAAGATTCTTAACAATCATTTCTCCTCAAGGAATATGGCAAGGATGATGGATTTAAAGTCCAAATTGGAGACGTGCAAGAAAGGAAATCTCAAATTGGAGGAGTATTTTCAGAGAGTCAAGAATCTTGTTGATTCCATGGCAGTCGCCGAATAA ATGGATCTCTCTTCTTCAAAGATCAGTACTTCTGCAGATATTACGCAACACTCCAAGATTATCAACCCGGGAAACAAGATCAATACCGTCAAGCTTGACGAAGAAAATTTCCTTCTATGGAAATTACAAGTTCTCACTGTATTATGCGAGCACAGGTTGACGAAATACATCGAGGAAGACGCTGAAATTCCGGACAACTTTCTTCCCTCAAATGATACTTCTTCTTCTGTGAAATTACCAAATCCAGCATATGATCTTTGGGTTCGTCAAGATAGCTTGATCACAGCTTGGCTTTTTGGCTCTATGTCGAATTCCCTTATCTCCGAAATGCTTGACTGTGACAAAGAGTGTGAGGTCTGGAAGATTCTTAACAATCATTTCTCCTCAAGGAATATGGCAAGGATGATGGATTTAAAGTCCAAATTGGAGACGTGCAAGAAAGGAAATCTCAAATTGGAGGAGTATTTTCAGAGAGTCAAGAATCTTGTTGATTCCATGGCAGTCGCCGAATAA ATGGATCTCTCTTCTTCAAAGATCAGTACTTCTGCAGATATTACGCAACACTCCAAGATTATCAACCCGGGAAACAAGATCAATACCGTCAAGCTTGACGAAGAAAATTTCCTTCTATGGAAATTACAAGTTCTCACTGTATTATGCGAGCACAGGTTGACGAAATACATCGAGGAAGACGCTGAAATTCCGGACAACTTTCTTCCCTCAAATGATACTTCTTCTTCTGTGAAATTACCAAATCCAGCATATGATCTTTGGGTTCGTCAAGATAGCTTGATCACAGCTTGGCTTTTTGGCTCTATGTCGAATTCCCTTATCTCCGAAATGCTTGACTGTGACAAAGAGTGTGAGGTCTGGAAGATTCTTAACAATCATTTCTCCTCAAGGAATATGGCAAGGATGATGGATTTAAAGTCCAAATTGGAGACGTGCAAGAAAGGAAATCTCAAATTGGAGGAGTATTTTCAGAGAGTCAAGAATCTTGTTGATTCCATGGCAGTCGCCGAATAA MDLSSSKISTSADITQHSKIINPGNKINTVKLDEENFLLWKLQVLTVLCEHRLTKYIEEDAEIPDNFLPSNDTSSSVKLPNPAYDLWVRQDSLITAWLFGSMSNSLISEMLDCDKECEVWKILNNHFSSRNMARMMDLKSKLETCKKGNLKLEEYFQRVKNLVDSMAVAE Homology
BLAST of Lag0022757 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia]) HSP 1 Score: 164.1 bits (414), Expect = 1.1e-36 Identity = 82/169 (48.52%), Postives = 119/169 (70.41%), Query Frame = 0
BLAST of Lag0022757 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 141.4 bits (355), Expect = 7.4e-30 Identity = 67/152 (44.08%), Postives = 102/152 (67.11%), Query Frame = 0
BLAST of Lag0022757 vs. NCBI nr
Match: TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 141.4 bits (355), Expect = 7.4e-30 Identity = 67/152 (44.08%), Postives = 102/152 (67.11%), Query Frame = 0
BLAST of Lag0022757 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia]) HSP 1 Score: 139.0 bits (349), Expect = 3.7e-29 Identity = 67/131 (51.15%), Postives = 91/131 (69.47%), Query Frame = 0
BLAST of Lag0022757 vs. NCBI nr
Match: KAA0067213.1 (keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 136.3 bits (342), Expect = 2.4e-28 Identity = 65/152 (42.76%), Postives = 100/152 (65.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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