Lag0022281 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022281
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr7: 22852555 .. 22853533 (+)
RNA-Seq ExpressionLag0022281
SyntenyLag0022281
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAAGACAAGAGCAAGAAAAGAAAGAGGTAATGAGGAAGAGGAGGTATCTGTTGCCCCTGAAGTACCACGAACAAAGGCGAAGAAGAAGAAGACGCTAGAAGAAAAAAAAGCTAAGAGAAGACGACGTCAACAGCGGATGGAGGACCAAGAAGATGTTCAAAATGGTATGGAAGTTGTTGCTGCCACGGTAGTTGAAGAGAACCTGAAAGAACCAGAAGAACAAAATCCAGAGCAGATTGAACAGAGAGTTGCGGATACAGAGGAAGCTCAAGAAGAGGTTCAAGAAAAAAAAACAAAATGAAGATGTGCGAGGAGAACCGGCAGAGGTTGCGCTTGAAGGAGATAATGAGCCAGTACAGGAGGCTCGAGTGGAGGTGATCATGTCGGAGGCACCCAAACGTCGCTGCATTAAGCGAAAAACAGGTCGCATTAAGGTAGTCCGAACTGACACCCCATTACCTCCATCTACTGACTCTGAAAGAGAAAATGCAGAGAAAGAAGAGCGAGAGAAAAAAGAAGCTGAGGAAAAAGTGAGAGAAGACGTAAAGAAGAAAGCTGAGGAAGCGCGGTTGCTCAAGCGAAGGGCGGAAAAGGAGAAAAGTGTTGCTGAAGCATCAGAAGAACACGATGAAATAGAAGAACAATAGTTACCATTTGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGTATTTTCTAAGGATCGGTATTGCAGACCACGGCTGGGAGTTGTTTTGTGCGAAGCCTGGATTTGTAAACGCACAGGTGGTGTGTGAATTTTATGCTAACATAGTCAAGGAGGATGGTTTCCAGGTAATTGTCCGAGGAGTCGAGGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTTTAACCTTCAGAATTTCCCCCATGTAGCATATAATGAATGGTTATAG

mRNA sequence

ATGCCTAAGACAAGAGCAAGAAAAGAAAGAGGTAATGAGGAAGAGGAGGTATCTGTTGCCCCTGAAGTACCACGAACAAAGGCGAAGAAGAAGAAGACGCTAGAAGAAAAAAAAGCTAAGAGAAGACGACGTCAACAGCGGATGGAGGACCAAGAAGATGTTCAAAATGGTATGGAAGTTGTTGCTGCCACGGTAGTTGAAGAGAACCTGAAAGAACCAGAAGAACAAAATCCAGAGCAGATTGAACAGAGAGTTGCGGATACAGAGGAAGCTCAAGAAGAGGAGGCTCGAGTGGAGGTGATCATGTCGGAGGCACCCAAACGTCGCTGCATTAAGCGAAAAACAGGTCGCATTAAGGTAGTCCGAACTGACACCCCATTACCTCCATCTACTGACTCTGAAAGAGAAAATGCAGAGAAAGAAGAGCGAGAGAAAAAAGAAGCTGAGGAAAAAGTGAGAGAAGACGTAAAGAAGAAAGCTGAGGAAGCGCGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGTATTTTCTAAGGATCGGTATTGCAGACCACGGCTGGGAGTTGTTTTGTGCGAAGCCTGGATTTGTAAACGCACAGGTGGTGTGTGAATTTTATGCTAACATAGTCAAGGAGGATGGTTTCCAGGTAATTGTCCGAGGAGTCGAGGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTTTAACCTTCAGAATTTCCCCCATGTAGCATATAATGAATGGTTATAG

Coding sequence (CDS)

ATGCCTAAGACAAGAGCAAGAAAAGAAAGAGGTAATGAGGAAGAGGAGGTATCTGTTGCCCCTGAAGTACCACGAACAAAGGCGAAGAAGAAGAAGACGCTAGAAGAAAAAAAAGCTAAGAGAAGACGACGTCAACAGCGGATGGAGGACCAAGAAGATGTTCAAAATGGTATGGAAGTTGTTGCTGCCACGGTAGTTGAAGAGAACCTGAAAGAACCAGAAGAACAAAATCCAGAGCAGATTGAACAGAGAGTTGCGGATACAGAGGAAGCTCAAGAAGAGGAGGCTCGAGTGGAGGTGATCATGTCGGAGGCACCCAAACGTCGCTGCATTAAGCGAAAAACAGGTCGCATTAAGGTAGTCCGAACTGACACCCCATTACCTCCATCTACTGACTCTGAAAGAGAAAATGCAGAGAAAGAAGAGCGAGAGAAAAAAGAAGCTGAGGAAAAAGTGAGAGAAGACGTAAAGAAGAAAGCTGAGGAAGCGCGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGTATTTTCTAAGGATCGGTATTGCAGACCACGGCTGGGAGTTGTTTTGTGCGAAGCCTGGATTTGTAAACGCACAGGTGGTGTGTGAATTTTATGCTAACATAGTCAAGGAGGATGGTTTCCAGGTAATTGTCCGAGGAGTCGAGGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTTTAACCTTCAGAATTTCCCCCATGTAGCATATAATGAATGGTTATAG

Protein sequence

MPKTRARKERGNEEEEVSVAPEVPRTKAKKKKTLEEKKAKRRRRQQRMEDQEDVQNGMEVVAATVVEENLKEPEEQNPEQIEQRVADTEEAQEEEARVEVIMSEAPKRRCIKRKTGRIKVVRTDTPLPPSTDSERENAEKEEREKKEAEEKVREDVKKKAEEARAKYAELLKRDFLFERGFSGDLPYFLRIGIADHGWELFCAKPGFVNAQVVCEFYANIVKEDGFQVIVRGVEVDWSPSAINALFNLQNFPHVAYNEWL
Homology
BLAST of Lag0022281 vs. NCBI nr
Match: PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii])

HSP 1 Score: 67.4 bits (163), Expect = 2.1e-07
Identity = 44/110 (40.00%), Postives = 57/110 (51.82%), Query Frame = 0

Query: 146 KEAEEKVREDVKKKAEEARAKYAE-LLKRDFLFERGFSGD------LPYFLRIGIADHGW 205
           K    K  + VK K+E A  +Y E +  R    E+GF GD       P F+   I  H W
Sbjct: 4   KRVAHKASKAVKLKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIEDVITQHNW 63

Query: 206 ELFCAKPGFVNAQVVCEFYANIVKEDGFQVIVRGVEVDWSPSAINALFNL 249
           +LFCA P  + A +V EFYAN+   D   V VRGV+V  S  AIN ++ L
Sbjct: 64  QLFCAHPEDLIAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGL 113

BLAST of Lag0022281 vs. NCBI nr
Match: PON90635.1 (hypothetical protein TorRG33x02_134920 [Trema orientale])

HSP 1 Score: 60.1 bits (144), Expect = 3.3e-05
Identity = 42/110 (38.18%), Postives = 56/110 (50.91%), Query Frame = 0

Query: 146 KEAEEKVREDVKKKAEEARAKYAELLKRDFL-FERGFSGD------LPYFLRIGIADHGW 205
           K    K  + VK  +E A A+Y E +K   L  E+GF+ +       P F+   I  H W
Sbjct: 4   KRVARKASKAVKFDSEAAEARYEEHIKNQPLGAEKGFAWNNNEPLGQPPFIADVIIQHNW 63

Query: 206 ELFCAKPGFVNAQVVCEFYANIVKEDGFQVIVRGVEVDWSPSAINALFNL 249
           +LFCA        +V EFYAN+   +   V V+GV+V WS  AIN LF L
Sbjct: 64  QLFCAHHEDPIVPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLFGL 113

BLAST of Lag0022281 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 59.7 bits (143), Expect = 4.3e-05
Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 0

Query: 146 KEAEEKVREDVKKKAEEARAKYA-ELLKRDFLFERGF-------SGDLPYFLRIGIADHG 205
           K    K  + VK + E A  +Y   +  R    E+GF        G LP+  ++ I  H 
Sbjct: 4   KRVARKAHKAVKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLPFIAQV-ITQHN 63

Query: 206 WELFCAKPGFVNAQVVCEFYANIVKEDGFQVIVRGVEVDWSPSAINALFNL 249
           W+ FCA P      +V EFYAN+       V VRGV+V WS  AINA+F L
Sbjct: 64  WKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGL 113

BLAST of Lag0022281 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-04
Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 0

Query: 134 ERENAEKEEREKKEAEEKVREDVKKKAEEARAKYA-ELLKRDFLFERGF-------SGDL 193
           ER +  +     K    K  + VK + E A  +Y   +  R    E+GF        G L
Sbjct: 1   ERSSTHRNRMGIKRVARKAHKAVKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQL 60

Query: 194 PYFLRIGIADHGWELFCAKPGFVNAQVVCEFYANIVKEDGFQVIVRGVEVDWSPSAINAL 249
           P+  ++ I  H W+ FCA P      +V EFYAN+   +   V VRGV+V WS  AINA+
Sbjct: 61  PFIAQV-ITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAV 120

BLAST of Lag0022281 vs. ExPASy TrEMBL
Match: A0A2P5B0K0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.0e-07
Identity = 44/110 (40.00%), Postives = 57/110 (51.82%), Query Frame = 0

Query: 146 KEAEEKVREDVKKKAEEARAKYAE-LLKRDFLFERGFSGD------LPYFLRIGIADHGW 205
           K    K  + VK K+E A  +Y E +  R    E+GF GD       P F+   I  H W
Sbjct: 4   KRVAHKASKAVKLKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIEDVITQHNW 63

Query: 206 ELFCAKPGFVNAQVVCEFYANIVKEDGFQVIVRGVEVDWSPSAINALFNL 249
           +LFCA P  + A +V EFYAN+   D   V VRGV+V  S  AIN ++ L
Sbjct: 64  QLFCAHPEDLIAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGL 113

BLAST of Lag0022281 vs. ExPASy TrEMBL
Match: A0A4Q3ENY7 (Uncharacterized protein OS=Sphingobacteriaceae bacterium OX=2021370 GN=EOP45_09925 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-05
Identity = 40/108 (37.04%), Postives = 55/108 (50.93%), Query Frame = 0

Query: 160 AEEARAKYAELLKRDFLFERGF--SGDLPYFLRIG--IADHGWELFCAKPGF-VNAQVVC 219
           ++ A  +Y  L++R  +FERG   S   P   +I   I    W  FCA P    N  ++ 
Sbjct: 10  SKAAEERYDILVQRSPIFERGLKVSSTTPIGSQINNTIEGFSWRKFCATPEHKANVTLMY 69

Query: 220 EFYANIVKEDGFQVIVRGVEVDWSPSAINALFNLQN--FPHVAYNEWL 261
           EFYAN+   +   V VRGV+VD S  AINAL    +  F +  Y +WL
Sbjct: 70  EFYANLPDHEDDVVTVRGVDVDCSVGAINALLGTPDIEFENEGYRQWL 117

BLAST of Lag0022281 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 6.1e-05
Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 0

Query: 134 ERENAEKEEREKKEAEEKVREDVKKKAEEARAKYA-ELLKRDFLFERGF-------SGDL 193
           ER +  +     K    K  + VK + E A  +Y   +  R    E+GF        G L
Sbjct: 1   ERSSTHRNRMGIKRVARKAHKAVKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQL 60

Query: 194 PYFLRIGIADHGWELFCAKPGFVNAQVVCEFYANIVKEDGFQVIVRGVEVDWSPSAINAL 249
           P+  ++ I  H W+ FCA P      +V EFYAN+   +   V VRGV+V WS  AINA+
Sbjct: 61  PFIAQV-ITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAV 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON42276.12.1e-0740.00hypothetical protein PanWU01x14_283280 [Parasponia andersonii][more]
PON90635.13.3e-0538.18hypothetical protein TorRG33x02_134920 [Trema orientale][more]
PON35554.14.3e-0536.94hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
PON46472.11.3e-0434.96hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5B0K01.0e-0740.00Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE... [more]
A0A4Q3ENY72.1e-0537.04Uncharacterized protein OS=Sphingobacteriaceae bacterium OX=2021370 GN=EOP45_099... [more]
A0A2P5BCG46.1e-0534.96Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..54
NoneNo IPR availableCOILSCoilCoilcoord: 131..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022281.1Lag0022281.1mRNA