Lag0022278 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGTGGGCGTCGCCGGAGATGGAGGCAGCGACAGAAGCACTGGTGGAGCTTCTCGCCTTCCTCCTCAAGGAACATCATTATTAATCCACAATCTCATCTTTCTGCAATTTTTATCCTCTTTTCTTCCCAAATCGAATAGTGAGTTACAACAAAATTTTATCTTTCTTTTATGGATTGATTCAATTCTGACAAAAGAAACACAAAATTAAGAGGAAAATCGATTTGGTTATGCATGAATTTGAAGAGAAAAGACGAAAAAAAAACGACCAGTCTCATTTGACCGGTGGCTTGCTTCACAAACCAATTAGGGTACAACGACAAAATAGTCATTACCAAAAATTGTAAGGACAATAAGGGAATGTAAAAATTCACCCCTCTAAGCCCCTCTTAATATAGTAGAGATTAAAAGTCTTAGGCATATCAATAACTTCCCTAATAAGTCAAGGATTTAAATTCCAATCAAAATTTCCCCAAATATAGATAAGAATGGTCATAACTATATCATAACAAAAATCTAACTTTATAAGATACATTAATTAATAGCTAAATTTGACAAAATGTATTAAGAAAAATGGTATGTGTATAGTTGGATATTCTTTCCTTGTACAAACTTCATTTTGATTTTATATAAATGGTTCATGATAAAAAAAAAAAAAATGAAACATTAGAAATTCAAAATCAAGAAAAAAAAAATGAAGGGTCTAAATAGTTTCTTTGTAGTTTTGCTGTTTGCTTTTGCATTAACGATTAACGTTGTCAACTGTTTTGCAGCATCCAAGTATGTACGGCCATTGACGCCAATGAGACTGGTGATTATCAACCGTCAAACAAATGATAATCTGAGGGCTCATTGCCATTCCAAAGATGATGATTTAGGTGAATGATTTAGAAAATTTTATTTTTTCATTTTTGTCACATTTGATAATTATTTGGGTCTCATTTGATAACCATTTGGTTTTTAGTTTTTGAAAATTAAGTCTATAAATACTACTACCACCTACAAGTTTGTTCGTTTGGTTTTTGAAAATTTAGTCTATAAACACTACTACCACCCACAAGTTTGTTTATTTTGTCATCTACACTCTTCCCATGTTTTCAAAAATCAAGTCAAATTTTAAAAACTAAAAAAAAAATAGTTTTCAAAACTTGTTTTTGTTTTTGGAATTTGGCTAAGAATTTGAATGTGTGTTTAACAAATATGAAAACCATGGCAAGTAAATTAGGAGAAAATAAGCATAGTTTTCAAAAACAAAAAACAAAAAACTTCATATGGTTATCAACTAGAGTTTTTGGTTTTTAAAGATTAAGTTTATAAGCACTAGTTTCTTTGTTTTGTTATCTACTTCCTTTCCATGTTTTGGAAAACCAAGTAAAGTTTTGAAAACTAAAAAAAAAATGTTTTTTTTTTAAAAAACCTTATTTTTGTTTTGGAATTTAGCTAGGAATTCAAATATATCCTTAACGAAGACAAAACCATTGCAAGGAAAATTAGGAGAAAACAAACAAAATTTTCAATCATTTTTTTTTCAAAAACCAAGAGTTTTCTAACTTTCTATTGTTTATTCTTTAAATTGGGTTTTTCTTTTCTAGTGTTTGAATCTCATGTTCCTCCATCAACTTTCAAGTTTGTTTTTATTTCGGTCTTTGAACTTTCAAATGTCTATTTTAATAAGCTTCAAGTTATTTCTATTTTGATATTCAAACAGTCAAAATGTATTATTATAGTTCCTAAACTTTTAAAAAAGAACTATTTTTGGTACTCTAACATATGTTATCCAATCCTCATCTTTATCCTATGTGATTTGAAATTTTGCTCATATCAACATGCTAGTATACATACTCAAAACTACATTAATTTGTAGAATAAAAATAAAGATAAGAATTCCAACATAGTTTTTTTTTCTTTTAAGTTCAATGACTAAAATAAATATTTTAAAAATTCAAGACCAAAATGATCCATTTTAAAAGTCTGGTAAGGTACAATGGACACAAAACCGATCTACACAATGGTAACGATATAGTTCACGTTTTGGGCATAAGCCCTGTCCTCCCTTATAAACCTATGATCATTCCCTTATCTAGCTAATGTAGGATTTTGGTCGCATGCACTCCCAACAAGTCTAGAGACTCAAATAGAACAAACTTGAACGTTGATAAGGACCAAATGAGATTTAAATTATTTTTTAACTGAATTTGAGGGTCCAACGTGGTTTGATATAAAATTCTGGATCTGCCACCGATTCAGGTGAGCAAGTCATCGAAATCGGGAAGAACATCCAGTGGCCTTTCAAGGAGAACTTTTTGGGAACGACGTTGTATTGGTGCGACTTTCACAACAAAGTAGCACATGCTTCGTTTCAAATTTTTTGGCCAGAGAACTCATCTTGGCTTTCAGATCGATGCAACGTGGGCGTCGATTCAACCTGTGTTTGGGCTGCTGATGACAAGGGCTTTTCCATTTTAAATTCTCCCATAAAACAGTTCGAGTTCATTCATCCATGGGAACCTGGTAGTGCTTAG ATGGTCGTGGGCGTCGCCGGAGATGGAGGCAGCGACAGAAGCACTGGTGGAGCTTCTCGCCTTCCTCCTCAAGGAACATCATTATTAATCCACAATCTCATCTTTCTGCAATTTTTATCCTCTTTTCTTCCCAAATCGAATACATCCAAGTATGTACGGCCATTGACGCCAATGAGACTGGTGATTATCAACCGTCAAACAAATGATAATCTGAGGGCTCATTGCCATTCCAAAGATGATGATTTAGGTGAGCAAGTCATCGAAATCGGGAAGAACATCCAGTGGCCTTTCAAGGAGAACTTTTTGGGAACGACGTTGTATTGGTGCGACTTTCACAACAAAGTAGCACATGCTTCGTTTCAAATTTTTTGGCCAGAGAACTCATCTTGGCTTTCAGATCGATGCAACGTGGGCGTCGATTCAACCTGTGTTTGGGCTGCTGATGACAAGGGCTTTTCCATTTTAAATTCTCCCATAAAACAGTTCGAGTTCATTCATCCATGGGAACCTGGTAGTGCTTAG ATGGTCGTGGGCGTCGCCGGAGATGGAGGCAGCGACAGAAGCACTGGTGGAGCTTCTCGCCTTCCTCCTCAAGGAACATCATTATTAATCCACAATCTCATCTTTCTGCAATTTTTATCCTCTTTTCTTCCCAAATCGAATACATCCAAGTATGTACGGCCATTGACGCCAATGAGACTGGTGATTATCAACCGTCAAACAAATGATAATCTGAGGGCTCATTGCCATTCCAAAGATGATGATTTAGGTGAGCAAGTCATCGAAATCGGGAAGAACATCCAGTGGCCTTTCAAGGAGAACTTTTTGGGAACGACGTTGTATTGGTGCGACTTTCACAACAAAGTAGCACATGCTTCGTTTCAAATTTTTTGGCCAGAGAACTCATCTTGGCTTTCAGATCGATGCAACGTGGGCGTCGATTCAACCTGTGTTTGGGCTGCTGATGACAAGGGCTTTTCCATTTTAAATTCTCCCATAAAACAGTTCGAGTTCATTCATCCATGGGAACCTGGTAGTGCTTAG MVVGVAGDGGSDRSTGGASRLPPQGTSLLIHNLIFLQFLSSFLPKSNTSKYVRPLTPMRLVIINRQTNDNLRAHCHSKDDDLGEQVIEIGKNIQWPFKENFLGTTLYWCDFHNKVAHASFQIFWPENSSWLSDRCNVGVDSTCVWAADDKGFSILNSPIKQFEFIHPWEPGSA Homology
BLAST of Lag0022278 vs. NCBI nr
Match: XP_038907112.1 (S-protein homolog 74-like [Benincasa hispida]) HSP 1 Score: 157.9 bits (398), Expect = 7.8e-35 Identity = 70/121 (57.85%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of Lag0022278 vs. NCBI nr
Match: XP_011656368.1 (S-protein homolog 1 [Cucumis sativus] >KGN45709.1 hypothetical protein Csa_005711 [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 6.6e-34 Identity = 69/121 (57.02%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of Lag0022278 vs. NCBI nr
Match: XP_008458671.1 (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]) HSP 1 Score: 151.4 bits (381), Expect = 7.3e-33 Identity = 66/121 (54.55%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of Lag0022278 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 133.3 bits (334), Expect = 2.1e-27 Identity = 56/118 (47.46%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of Lag0022278 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus]) HSP 1 Score: 133.3 bits (334), Expect = 2.1e-27 Identity = 56/118 (47.46%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of Lag0022278 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.3e-12 Identity = 39/115 (33.91%), Postives = 52/115 (45.22%), Query Frame = 0
BLAST of Lag0022278 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11 Identity = 35/111 (31.53%), Postives = 49/111 (44.14%), Query Frame = 0
BLAST of Lag0022278 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.1e-11 Identity = 34/105 (32.38%), Postives = 51/105 (48.57%), Query Frame = 0
BLAST of Lag0022278 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.9e-07 Identity = 33/102 (32.35%), Postives = 49/102 (48.04%), Query Frame = 0
BLAST of Lag0022278 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 4.2e-07 Identity = 33/109 (30.28%), Postives = 48/109 (44.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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