Lag0022191 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022191
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr7: 20674500 .. 20677150 (-)
RNA-Seq ExpressionLag0022191
SyntenyLag0022191
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTTCCAACGGAAAGGAGAAGAGATCAAAGAATTCCCTACCACCAACAAGAAAATGATTTCAAGATGAAAATCGATATCCCAACTTATAATGGGAAAATGGAAATTGAAGCATTCTTGGAATGGGTGAAACATGTGGAGAATTTTTTTACCTATATGAATACACCAGACACCAAGAAAGTTAAGTTGGTAGCTCTTAAATTGAAAGGTGGGGCGCAAGCTTGGTGGGATCAACTTGAGTTAAATCGGCAAAGATTTGGAAAGAGACCAATTCGACGGTGGGAAAGAATGAAAAAGATGATGAAAGAACGGTTCCTACCGACCAATTTCGAGCAAATTCTATACAACCAATATCAAAATTGTTGCCAGGGCACACGTACGGTAATGGAGTATACTGAAGAATTCCATAGATTGGGAGCCCGAACAAATCTTGGGAAAATCAACAGTATTTAGTGGCAAGATACAAAGGAGGGTTACGAGCGGACATCCAAGAACGCATAACTTTACAACCAATAGCATATTTAAATGAAGCTATAACGGCGACTGCCACGGTGGAAGAACAATTAGCTAACCGGTTCAAGTGGCAATATTCAAGAAGAAACTTGGGCGACCAAAGCAATCCATATCAAGAACCATTCTTCCTGAGAGAAATACTTCACAAAATCCCTCTGCAACAGTCAAAGGCAAACAAATTGATCTGGGAACAACAAAAGAACCGACACCTAAGAAAAATGCAAACGCATACCTGAGACCTACCTTGGGTAAATGCTTTCGTTGTAATCAGACCGGCCATTTGTCAAACGAATGCCCACAAAGAAAGACACTAGCTATTGCTGATAATGTAGAATATCAAGAAGACAGCGACTACTCGGACAATGAAGAACAGGTTGATTTTCTTGAACCATATGAGGGAGAACCATTGTCATTGGTGATTCAAAGGCTCCTTTTGGCCCCAAAGACAGACCCAACATACCAAGACATGCCTTGTTTAAGACACGTTGCACGATTAATGGGAAAATCTGCACTGTTATTATTGATAGTGGTATTACCGAAAATGTGGTTGCTAGCAAACTAGTTTCAGCCCTCAATTTGCCATTAACTACACATCCAACCCCTATAAAGTTTGTTGGATTAAGAAAGGTGGTGAAGCCCAAGTAACACACACAAGTACCATCCCATTATCCATTGGAGGAAGCTACAAAGATCAAATTATTTGTGACGTGCTAGATATGGACGCATGCCATATTCTTTTAGGGCGACCATGGCAATATGATGTCCAAGCTATTCATAAGGGAAGAGACAATACTTACGAGTTCTTATGGATGGGGAAGAAAATAGTCCTTTTGCCTCCAATCATTTGAAACAAACGGTAACAAGCAACAACTCCAACAAGAAAGGTCAACTCTTTACTTTATCTTCTGGAAAAACTTTTCTTCATGACAAAAATTTTCCCATACTTGGTTTAGTAATTAAAAACTTTGATAATGCTAACCCCTGCACTACTATGCCAAGTGAAGTTCAGAATCTTTTGAAAGAATTTAATCAAATTGTAGCACTACAAGAATTAAAAGATTTCCTGACGGTTTTTCTCCCGACGTGAAAAAAATCGTGGGCAAATATAGGCAATTCCAACGATAATTTGACCGTTGGGATATATATAGGCAATGCCAACGGTTTTATAAAACCGTTGGCATATGTATACGAAAACCGTTGGCATATGTATACGAAATCCCAACGGTATTTTTATTTGTTGGCAAATACATACAAAATCCCCATGGTTCTACGGTAGCCGTGGGAAAATACATACGAAATCCCAAAGGGTTGAAATCATAATTTATTTGGTTCGTTAGTATAGCCAACGGTTTGTATTAACCGTTGGTATATGTATAGAAAATCCCAACGGTTTATAGAAACCGTTGGATATCTATAAACAATCCCAACGGTTTAAAAACCGTAGGCATATATTTAGAAAATCCCAAAGGTTTGGATCGCTGGTATAGCCAACGGTTTATTTAATCCGTTGGCATATATATAGGAAATGCCAACAACTGTTGAATCCGTAGGGAAATATATACGATAACCAACGGTTTAGTAAAACCGTAGGGATATATTTAGGAATTTTTTTGGTTCATTTGTATAGCCATCGGTTTAGTTAAACCGTGGGTGGTTCTTCGTCCTATGGCAACGGTTTGGTGGGACCGTCGGTGGTTCATGTACTTGTCGACGGTTCATTTAAGCCGTAGGGAGTTGTTGGAATTCCAGCAGACCGTGGTTGATTAATTTACCAACGATTTAATAGAACCGTCGATTTATCATTATTATTCCCAACGGTTGAGTTAAACCGTGGGTAGATTTTATTAAAATTCCCCTTTTCACGATTGCTTTCCCTCATTTTCTCCCATTACGCGCTTTCTTCCCTCCCTTTCTCCCATTTTCGTTCCATTTTCATCCACATCCTCTCCATTCTCCATTTTCGCCCATTTGAGTTTCAGTCTTTGCCTCCGCCGTTTGAGTTTCAGTCTTCCCCACTGTCGTCTCCGTTCATCTTCCCGATTTCTGGCTTCGTTTCAGATTCAGGTATGTTTCGTTCATTTGTTCTTCTTGTTCTTCGTGATTTGAATGCCTTTTCTGCATTCTCCAAACCCTAG

mRNA sequence

ATGAATCTTCCAACGGAAAGGAGAAGAGATCAAAGAATTCCCTACCACCAACAAGAAAATGATTTCAAGATGAAAATCGATATCCCAACTTATAATGGGAAAATGGAAATTGAAGCATTCTTGGAATGGGTGAAACATGTGGAGAATTTTTTTACCTATATGAATACACCAGACACCAAGAAAGTTAAGTTGGTAGCTCTTAAATTGAAAGGTGGGGCGCAAGCTTGGTGGGATCAACTTGAGTTAAATCGGCAAAGATTTGGAAAGAGACCAATTCGACGGTGGGAAAGAATGAAAAAGATGATGAAAGAACGGTTCCTACCGACCAATTTCGAGCAAATTCTATACAACCAATATCAAAATTGTTGCCAGGGCACACGTACGAAGAAACTTGGGCGACCAAAGCAATCCATATCAAGAACCATTCTTCCTGAGAGAAATACTTCACAAAATCCCTCTGCAACAGTCAAAGGCAAACAAATTGATCTGGGAACAACAAAAGAACCGACACCTAAGAAAAATGCAAACGCATACCTGAGACCTACCTTGGGTAAATGCTTTCGTTGTAATCAGACCGGCCATTTGTCAAACGAATGCCCACAAAGAAAGACACTAGCTATTGCTGATAATGTAGAATATCAAGAAGACAGCGACTACTCGGACAATGAAGAACAGGTTGATTTTCTTGAACCATATGAGGGAGAACCATTGTCATTGGTGATTCAAAGGCTCCTTTTGGCCCCAAAGACAGACCCAACATACCAAGACATGCCTTGTTTAAGACACGTTGCACGATTAATGGGAAAATCTGCACTGTTATTATTGATAGTGTCTTTGCCTCCGCCGTTTGAGTTTCAGTCTTCCCCACTGTCGTCTCCGTTCATCTTCCCGATTTCTGGCTTCGTTTCAGATTCAGGTATGTTTCGTTCATTTGTTCTTCTTGTTCTTCGTGATTTGAATGCCTTTTCTGCATTCTCCAAACCCTAG

Coding sequence (CDS)

ATGAATCTTCCAACGGAAAGGAGAAGAGATCAAAGAATTCCCTACCACCAACAAGAAAATGATTTCAAGATGAAAATCGATATCCCAACTTATAATGGGAAAATGGAAATTGAAGCATTCTTGGAATGGGTGAAACATGTGGAGAATTTTTTTACCTATATGAATACACCAGACACCAAGAAAGTTAAGTTGGTAGCTCTTAAATTGAAAGGTGGGGCGCAAGCTTGGTGGGATCAACTTGAGTTAAATCGGCAAAGATTTGGAAAGAGACCAATTCGACGGTGGGAAAGAATGAAAAAGATGATGAAAGAACGGTTCCTACCGACCAATTTCGAGCAAATTCTATACAACCAATATCAAAATTGTTGCCAGGGCACACGTACGAAGAAACTTGGGCGACCAAAGCAATCCATATCAAGAACCATTCTTCCTGAGAGAAATACTTCACAAAATCCCTCTGCAACAGTCAAAGGCAAACAAATTGATCTGGGAACAACAAAAGAACCGACACCTAAGAAAAATGCAAACGCATACCTGAGACCTACCTTGGGTAAATGCTTTCGTTGTAATCAGACCGGCCATTTGTCAAACGAATGCCCACAAAGAAAGACACTAGCTATTGCTGATAATGTAGAATATCAAGAAGACAGCGACTACTCGGACAATGAAGAACAGGTTGATTTTCTTGAACCATATGAGGGAGAACCATTGTCATTGGTGATTCAAAGGCTCCTTTTGGCCCCAAAGACAGACCCAACATACCAAGACATGCCTTGTTTAAGACACGTTGCACGATTAATGGGAAAATCTGCACTGTTATTATTGATAGTGTCTTTGCCTCCGCCGTTTGAGTTTCAGTCTTCCCCACTGTCGTCTCCGTTCATCTTCCCGATTTCTGGCTTCGTTTCAGATTCAGGTATGTTTCGTTCATTTGTTCTTCTTGTTCTTCGTGATTTGAATGCCTTTTCTGCATTCTCCAAACCCTAG

Protein sequence

MNLPTERRRDQRIPYHQQENDFKMKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVKLVALKLKGGAQAWWDQLELNRQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCCQGTRTKKLGRPKQSISRTILPERNTSQNPSATVKGKQIDLGTTKEPTPKKNANAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEYQEDSDYSDNEEQVDFLEPYEGEPLSLVIQRLLLAPKTDPTYQDMPCLRHVARLMGKSALLLLIVSLPPPFEFQSSPLSSPFIFPISGFVSDSGMFRSFVLLVLRDLNAFSAFSKP
Homology
BLAST of Lag0022191 vs. NCBI nr
Match: XP_031744062.1 (uncharacterized protein LOC116404773 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 3.9e-59
Identity = 137/298 (45.97%), Postives = 177/298 (59.40%), Query Frame = 0

Query: 8   RRDQRIPYHQQE-NDFKMKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVKLVA 67
           R ++RI   + E +D+KMKID+P Y+GK  IEAFL+W+K  ENFF YM+TP+ KKV LVA
Sbjct: 12  RNNRRIEVRRGEYHDYKMKIDLPMYDGKRNIEAFLDWIKSTENFFNYMDTPERKKVHLVA 71

Query: 68  LKLKGGAQAWWDQLELNRQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCCQGT 127
           LKL+ GA AWWDQLE+NRQR GK+PIR WE+MKK++K RFLP N+EQ LYNQYQNC QG 
Sbjct: 72  LKLRAGASAWWDQLEINRQRCGKQPIRSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGV 131

Query: 128 -----------------------------------------RTKKLGRPKQSISRTILPE 187
                                                    R+K L R  +S   T   +
Sbjct: 132 RSVADYIEEFHRLSARTNLSENEQHQVARFVGETVEEMIAIRSKNLNR--RSAWETTSTK 191

Query: 188 RNTSQNPSATVKGK-------QIDLGTTKEPTPKKNA-NAYLRPTLGKCFRCNQTGHLSN 247
             T+  PS + KGK       ++ +   KE T K +  N+Y RP+LGKCFRC QTGHLSN
Sbjct: 192 SKTNDQPSTSTKGKGKEVDNQEVAVERKKEQTFKPSGQNSYSRPSLGKCFRCGQTGHLSN 251

Query: 248 ECPQRKTLAIADNVEYQEDSDYSDNEEQVDFLEPYEGEPLSLVIQRLLLAPKTDPTYQ 256
            CPQRKT+AIA+    Q   D  + EE+ + +E  +GE +S  IQR+L+ PK +   Q
Sbjct: 252 NCPQRKTIAIAEE-GGQTSEDSIEAEEETELIEADDGERVSCFIQRVLIMPKEEKNLQ 306

BLAST of Lag0022191 vs. NCBI nr
Match: XP_031743026.1 (uncharacterized protein LOC116404533 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 2.8e-57
Identity = 139/321 (43.30%), Postives = 175/321 (54.52%), Query Frame = 0

Query: 8   RRDQRIPYHQQE-NDFKMKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVKLVA 67
           R ++RI   + E +D+KMKID+P Y GK  IEAFL+W+K  ENFFTYM+TP+ KKV LVA
Sbjct: 155 RNNRRIEARRGEYHDYKMKIDLPMYYGKRNIEAFLDWIKSTENFFTYMDTPERKKVHLVA 214

Query: 68  LKLKGGAQAWWDQLELNRQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCCQGT 127
           LKL+ GA AWWDQLE+NRQR GK+P+R WE+MKK++K RFLP N+EQ LYNQYQNC QG 
Sbjct: 215 LKLRAGASAWWDQLEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGV 274

Query: 128 RT---------------------------------------------------------- 187
           RT                                                          
Sbjct: 275 RTVAEYIEEFHRLSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFAETV 334

Query: 188 --------KKLGRPKQSISRTILPERNTSQNPSATVKGKQID-----LGTTKEPTPKKNA 247
                   K L R     + +   + N   + S   KGK+ID     +   KE T K + 
Sbjct: 335 EEMIAIRSKNLNRRSAWETNSTKSKTNDQPSTSTKAKGKEIDNQEVAVERKKEQTFKPSG 394

Query: 248 -NAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEYQEDSDYSDNEEQVDFLEPYEG 256
            N Y RP+LGKCFRC QTGHLSN CPQRKT+AIA+    Q   D  + EE+ + +E  +G
Sbjct: 395 QNNYSRPSLGKCFRCGQTGHLSNNCPQRKTIAIAEE-GGQTSEDSIEAEEETELIEADDG 454

BLAST of Lag0022191 vs. NCBI nr
Match: XP_031741035.1 (uncharacterized protein LOC116403692 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-56
Identity = 137/321 (42.68%), Postives = 176/321 (54.83%), Query Frame = 0

Query: 8   RRDQRIPYHQQE-NDFKMKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVKLVA 67
           R +QRI   + E +D+KMKID+P Y+GK  IEAFL+W+K  ENFF YM+TP+ KKV LVA
Sbjct: 155 RNNQRIEARRGEYHDYKMKIDLPMYDGKRNIEAFLDWIKSTENFFNYMDTPERKKVHLVA 214

Query: 68  LKLKGGAQAWWDQLELNRQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCCQGT 127
           LKL+ GA AWWDQLE+NRQR GK+P+R WE+MKK++K RFLP N+EQ LYNQYQNC QG 
Sbjct: 215 LKLRAGASAWWDQLEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGV 274

Query: 128 ------------------------------------------------------------ 187
                                                                       
Sbjct: 275 RSVAEYIEEFHRLSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFAETV 334

Query: 188 ------RTKKLGRPKQSISRTILPERNTSQNPSATVKGKQID-----LGTTKEPTPKKNA 247
                 R+K L R     + +   + N   + S   KGK+ID     +   KE T K + 
Sbjct: 335 EEMIAIRSKNLNRRSAWETNSTKSKTNDQPSTSTKAKGKEIDNQEVAVERKKEQTFKPSG 394

Query: 248 -NAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEYQEDSDYSDNEEQVDFLEPYEG 256
            N+Y RP+LGKCFRC QTGHLS+ CPQRKT+AIA+    Q   D  + EE+ + +E  +G
Sbjct: 395 QNSYSRPSLGKCFRCGQTGHLSDNCPQRKTIAIAEE-GGQISEDSIEAEEETELIEADDG 454

BLAST of Lag0022191 vs. NCBI nr
Match: KAA0059834.1 (uncharacterized protein E6C27_scaffold108G001170 [Cucumis melo var. makuwa])

HSP 1 Score: 229.6 bits (584), Expect = 4.0e-56
Identity = 130/282 (46.10%), Postives = 170/282 (60.28%), Query Frame = 0

Query: 24  MKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVKLVALKLKGGAQAWWDQLELN 83
           MKID+P YNGK + E+FL+WVK  +NFF YM+T D KKV LVAL+L+GGA AWWDQLE+N
Sbjct: 1   MKIDLPVYNGKRDTESFLDWVKSTKNFFNYMDTLDRKKVHLVALELQGGASAWWDQLEIN 60

Query: 84  RQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCCQGTRT--------------K 143
           RQR GK PI  WE+MKK++K RFLP N+EQ +YNQYQNC QG+R+               
Sbjct: 61  RQRCGKPPICSWEKMKKLLKARFLPPNYEQTIYNQYQNCHQGSRSIAEYIEEFHRLSART 120

Query: 144 KLGRPKQ-SISRTI-----------LPERN------------------TSQNPSATVKGK 203
            LG  +Q  I+R I           L   N                  T++ PS +V GK
Sbjct: 121 NLGENEQHQIARFIGETVEEMMVAPLKSSNRKTTWKVNFSKKQSYSSRTNEQPSTSVGGK 180

Query: 204 QIDLGT-----TKEPTPK-KNANAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEY 256
             D+ T      K+ T K K+ N Y RP+L KCFRC Q+GHLSN CPQR+T+++AD    
Sbjct: 181 SKDVDTQDAAKKKDNTDKGKSQNTYTRPSLEKCFRCGQSGHLSNNCPQRETISLADKESN 240

BLAST of Lag0022191 vs. NCBI nr
Match: XP_031745523.1 (uncharacterized protein LOC116405899 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 4.6e-52
Identity = 129/330 (39.09%), Postives = 172/330 (52.12%), Query Frame = 0

Query: 24  MKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVKLVALKLKGGAQAWWDQLELN 83
           MK+D+P+Y+GK +IE+FL+W+K  ENFF+YM+TP+ KKV+LVALKLKGGA AWW+QLE+N
Sbjct: 1   MKVDLPSYSGKRDIESFLDWLKSTENFFSYMDTPEQKKVRLVALKLKGGASAWWEQLEVN 60

Query: 84  RQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCCQGTR--TKKLGRPKQSISRT 143
           RQR  KRP+R WE+MKK++K RFLP N+EQ LYNQYQNC QGTR  T+ +    +  +RT
Sbjct: 61  RQRCNKRPVRSWEKMKKLLKGRFLPPNYEQTLYNQYQNCRQGTRTVTEYIEEFHRLSART 120

Query: 144 ILPERNTSQ----------------------------------NPSATVKGKQIDLGTTK 203
            L E    Q                                       +K K ++  TT 
Sbjct: 121 NLSENEQHQIARFVGGLRFDIKEKVKLQPLRFLSEAISLAETVEEMIALKAKTMNRRTTW 180

Query: 204 EPTP-----------------------------------------KKNANAYLRPTLGKC 263
           EPTP                                          KN N Y RP+LGKC
Sbjct: 181 EPTPTKKTSYTSKTNDQPMAPIHGKGKEADSQTATNEKKAEIINKSKNQNNYTRPSLGKC 240

Query: 264 FRCNQTGHLSNECPQRKTLAIADNVEYQEDSDYSDNEEQVDFLEPYEGEPLSLVIQRLLL 277
           FRC Q GHLSN CPQRKT+A+A+        D S+  E+ + +E  EG+   ++  +  L
Sbjct: 241 FRCGQPGHLSNSCPQRKTIALAEEEGNLPGEDESEPREETEEIEVDEGDKSPVLSIKYSL 300

BLAST of Lag0022191 vs. ExPASy TrEMBL
Match: A0A5A7UXS4 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G001170 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.9e-56
Identity = 130/282 (46.10%), Postives = 170/282 (60.28%), Query Frame = 0

Query: 24  MKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVKLVALKLKGGAQAWWDQLELN 83
           MKID+P YNGK + E+FL+WVK  +NFF YM+T D KKV LVAL+L+GGA AWWDQLE+N
Sbjct: 1   MKIDLPVYNGKRDTESFLDWVKSTKNFFNYMDTLDRKKVHLVALELQGGASAWWDQLEIN 60

Query: 84  RQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCCQGTRT--------------K 143
           RQR GK PI  WE+MKK++K RFLP N+EQ +YNQYQNC QG+R+               
Sbjct: 61  RQRCGKPPICSWEKMKKLLKARFLPPNYEQTIYNQYQNCHQGSRSIAEYIEEFHRLSART 120

Query: 144 KLGRPKQ-SISRTI-----------LPERN------------------TSQNPSATVKGK 203
            LG  +Q  I+R I           L   N                  T++ PS +V GK
Sbjct: 121 NLGENEQHQIARFIGETVEEMMVAPLKSSNRKTTWKVNFSKKQSYSSRTNEQPSTSVGGK 180

Query: 204 QIDLGT-----TKEPTPK-KNANAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEY 256
             D+ T      K+ T K K+ N Y RP+L KCFRC Q+GHLSN CPQR+T+++AD    
Sbjct: 181 SKDVDTQDAAKKKDNTDKGKSQNTYTRPSLEKCFRCGQSGHLSNNCPQRETISLADKESN 240

BLAST of Lag0022191 vs. ExPASy TrEMBL
Match: A0A5D3CJ99 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00470 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.1e-51
Identity = 113/243 (46.50%), Postives = 149/243 (61.32%), Query Frame = 0

Query: 20  NDFKMKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVKLVALKLKGGAQAWWDQ 79
           +D+KMKID+PTY GK ++E+FL+W+++ ENFF YM+T D KKV LVALKL+GGA AWWDQ
Sbjct: 168 HDYKMKIDLPTYKGKHDLESFLDWIENTENFFNYMDTFDRKKVHLVALKLRGGASAWWDQ 227

Query: 80  LELNRQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCCQGTR------------ 139
           +E+NRQR+GK PI  WE+MKK+MK RFLP N+EQ LYNQYQNC QG++            
Sbjct: 228 VEINRQRYGKPPICSWEKMKKLMKARFLPPNYEQTLYNQYQNCRQGSKSVAEYIKEFHKL 287

Query: 140 -------------------TKKLGRPKQSISRTILPERNTSQNPSATVKGKQIDLGTTKE 199
                              T +    +   S+       T++ PS +V  K  D+   + 
Sbjct: 288 SARTNLKTVEEMMAARLRNTNRKTTWETDFSKKQSYSNKTNEQPSTSVAEKSKDVEAQEA 347

Query: 200 PTPKKNA------NAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEYQEDSDYSDN 226
              K+NA      N Y RP+LGKCFRC+QT +LSN CPQRKT+A+A+  EY    D S  
Sbjct: 348 TKKKENAGKGKVQNNYNRPSLGKCFRCDQTSYLSNTCPQRKTIALAEE-EYDSARDDSKT 407

BLAST of Lag0022191 vs. ExPASy TrEMBL
Match: A0A6J1CCQ8 (uncharacterized protein LOC111009540 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009540 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 9.3e-51
Identity = 131/342 (38.30%), Postives = 172/342 (50.29%), Query Frame = 0

Query: 4   PTERRRDQRIPYHQQENDFKMKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVK 63
           P   R +  +       DFKMKID+PT+NGKM++E FL+ VK+VENFF Y NTP+ KKVK
Sbjct: 127 PRFAREEHYVERGGVRTDFKMKIDLPTFNGKMDVETFLDRVKNVENFFDYTNTPEDKKVK 186

Query: 64  LVALKLKGGAQAWWDQLELNRQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCC 123
           LVA K++ GA AWWDQLE+N +R GK+PIR W RM ++M+ERFLP NFEQ+LY  YQ C 
Sbjct: 187 LVAFKIQSGASAWWDQLEINCRRLGKQPIRSWPRMLRLMRERFLPPNFEQLLYQPYQRCR 246

Query: 124 QGTRT--------KKLG------------------------------RPKQSISRTIL-- 183
           QG +T         +LG                              +P   ++  I+  
Sbjct: 247 QGFKTIADYTEAFHRLGAKTNIAETEDYKIARFVDGLREDIQDQMDIQPIHLLTDAIVMA 306

Query: 184 -----------PERNTS------QNPSATVKGKQIDLGTTKEPT---------------- 243
                      P R T          + T  GK + +GTT   T                
Sbjct: 307 TKIEDKKRLRTPARRTPWDKPSISKTATTDTGKPLQIGTTSASTTKPPDDPAKSSPFKTP 366

Query: 244 ---PKKNANAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEYQEDSDYSDNEEQVD 270
               K+  N Y+RPTLGKCFRC Q  HLSNECPQR+ LA+ D  +  E       E+   
Sbjct: 367 DTSSKRGTNPYIRPTLGKCFRCGQVDHLSNECPQRRALALVDQDDLLETDIDLPTEDDPT 426

BLAST of Lag0022191 vs. ExPASy TrEMBL
Match: A0A6J1CAS9 (uncharacterized protein LOC111009540 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009540 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 9.3e-51
Identity = 131/342 (38.30%), Postives = 172/342 (50.29%), Query Frame = 0

Query: 4   PTERRRDQRIPYHQQENDFKMKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKVK 63
           P   R +  +       DFKMKID+PT+NGKM++E FL+ VK+VENFF Y NTP+ KKVK
Sbjct: 127 PRFAREEHYVERGGVRTDFKMKIDLPTFNGKMDVETFLDRVKNVENFFDYTNTPEDKKVK 186

Query: 64  LVALKLKGGAQAWWDQLELNRQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNCC 123
           LVA K++ GA AWWDQLE+N +R GK+PIR W RM ++M+ERFLP NFEQ+LY  YQ C 
Sbjct: 187 LVAFKIQSGASAWWDQLEINCRRLGKQPIRSWPRMLRLMRERFLPPNFEQLLYQPYQRCR 246

Query: 124 QGTRT--------KKLG------------------------------RPKQSISRTIL-- 183
           QG +T         +LG                              +P   ++  I+  
Sbjct: 247 QGFKTIADYTEAFHRLGAKTNIAETEDYKIARFVDGLREDIQDQMDIQPIHLLTDAIVMA 306

Query: 184 -----------PERNTS------QNPSATVKGKQIDLGTTKEPT---------------- 243
                      P R T          + T  GK + +GTT   T                
Sbjct: 307 TKIEDKKRLRTPARRTPWDKPSISKTATTDTGKPLQIGTTSASTTKPPDDPAKSSPFKTP 366

Query: 244 ---PKKNANAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEYQEDSDYSDNEEQVD 270
               K+  N Y+RPTLGKCFRC Q  HLSNECPQR+ LA+ D  +  E       E+   
Sbjct: 367 DTSSKRGTNPYIRPTLGKCFRCGQVDHLSNECPQRRALALVDQDDLLETDIDLPTEDDPT 426

BLAST of Lag0022191 vs. ExPASy TrEMBL
Match: A0A5D3DGR0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00870 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.0e-49
Identity = 125/337 (37.09%), Postives = 176/337 (52.23%), Query Frame = 0

Query: 6   ERRRDQRIPYHQQE---NDFKMKIDIPTYNGKMEIEAFLEWVKHVENFFTYMNTPDTKKV 65
           E RR + +   +Q+   +++KMKID+P+Y+GK  IE FL+W+K+ ENFF YM T   KKV
Sbjct: 136 EFRRHRYVQNERQQRENSEYKMKIDLPSYDGKRNIENFLDWLKNTENFFAYMGTTKNKKV 195

Query: 66  KLVALKLKGGAQAWWDQLELNRQRFGKRPIRRWERMKKMMKERFLPTNFEQILYNQYQNC 125
            LVALKLKGGA AWWDQ+ +NRQ+ GK PIR WE+MKK+MK+RF+P N+EQ LY QYQNC
Sbjct: 196 HLVALKLKGGASAWWDQITVNRQKQGKHPIRSWEKMKKLMKQRFVPPNYEQTLYTQYQNC 255

Query: 126 CQGTRT--------KKLG------------------------------RPKQSISRTIL- 185
            QG R          +LG                              +P Q +S  I  
Sbjct: 256 RQGMRKTAEYIEEFHRLGGRTNLMEGEKHLISWFVGGLRFDLKEKVKLQPFQHLSEAITY 315

Query: 186 -------------PERNTSQNPSATVK----GKQIDLGTTKEPT--------------PK 245
                          R     PSA+ K      ++   T+++P                K
Sbjct: 316 AETVEEMIENRAKSTRKRPWEPSASKKTTAGNSKLKNATSEKPVEQEESSGKKEVPEGEK 375

Query: 246 KNANAYLRPTLGKCFRCNQTGHLSNECPQRKTLAIADNVEYQEDSDYSDNEEQVDFLEPY 270
           K  N Y RP  G C+RC Q GH SN+CPQRKT+A+A + +   +    + +E+ + +E  
Sbjct: 376 KGKNPYQRPFSGNCYRCGQMGHPSNQCPQRKTIAVAKDNDDGSNRSLGEFDEETEVIEAD 435

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031744062.13.9e-5945.97uncharacterized protein LOC116404773 [Cucumis sativus][more]
XP_031743026.12.8e-5743.30uncharacterized protein LOC116404533 [Cucumis sativus][more]
XP_031741035.11.4e-5642.68uncharacterized protein LOC116403692 [Cucumis sativus][more]
KAA0059834.14.0e-5646.10uncharacterized protein E6C27_scaffold108G001170 [Cucumis melo var. makuwa][more]
XP_031745523.14.6e-5239.09uncharacterized protein LOC116405899 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UXS41.9e-5646.10CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5D3CJ997.1e-5146.50Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22... [more]
A0A6J1CCQ89.3e-5138.30uncharacterized protein LOC111009540 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CAS99.3e-5138.30uncharacterized protein LOC111009540 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A5D3DGR01.0e-4937.09Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 185..201
e-value: 5.2E-5
score: 32.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 184..201
e-value: 1.9E-6
score: 27.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 185..201
score: 10.410928
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 63..128
e-value: 9.2E-7
score: 29.1
NoneNo IPR availableGENE3D4.10.60.10coord: 180..205
e-value: 5.8E-8
score: 34.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..160
NoneNo IPR availablePANTHERPTHR35046:SF6ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 162..250
NoneNo IPR availablePANTHERPTHR35046:SF6ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 6..128
NoneNo IPR availablePANTHERPTHR35046ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 6..128
coord: 162..250
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 176..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022191.1Lag0022191.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding