Lag0022176 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0022176
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr7: 20408933 .. 20409737 (+)
RNA-Seq Expression	Lag0022176
Synteny	Lag0022176

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCCCTAATTAAATTTGGAAAGCTCGCAGCGTCGAGACATTGTGGAGGTAGTGTCTCGACGCTGCCTCGAATTCAGGTGCGCTCTAACTTATGCTTAGCGTTGAGACGCTCCAAGGGCTAGCGTCTCAACGCTAGGCCTTTAATTGATCTTCCTTTTCTGTTTTCTTGGCTCGAACTTATTCTTTAGCTCATAAATCATCGGTAATGCTCAAAAATGTCGAATTCCATTGAAATGCTCGATTCCTACAAAACAAAACCAAATAGACATAAAATTGGCCAAAAATTACCCGAGACTAACGATAAAAGCATATGAAATATAGCACAATAAATTGCGCTATCAGCGCCGTCGCGAAGGAGTACGTCATGGCAGTGAAGAAGCTAAGCTGCGAAGTGGCGGAATTGATAGCAGAGGGATTGAAAATCGAGCCAAGAAACGCAATAAGCAAGCTCCTAAACGACGAGAAAAGCGACTGTTGTTTCAGAGTGAACCACTACCCGCCATGTCCGGACCTCCAAGCTGTAGGCGGAAGTGGAAGGAACATGATCGGATTCGGGGAACACACAGACTCACAAATCATATCACTACTAAGATCAAACAATTCGACCGACCTACAAATCTGCCTCAGAGACATCGCGTGGGTGTCAGTGCCGCTGGACGCGGCGACGATCTTCGTGAACGTCGGCGACGCGCTGTAGGTGATGAGCAACGACATATTCAAAAGCGTGAAGCACAAAGTGGTGGCGGATTCCAACAGAGAGAGGGTTTTGATGATTTACTTCAGAGGGCCACCATTGAGTGA

mRNA sequence

ATGTACGCCCTAATTAAATTTGGAAAGCTCGCAGCGTCGAGACATTGTGGAGGTAGTGTCTCGACGCTGCCTCGAATTCAGCGCCGTCGCGAAGGAGTACGTCATGGCAGTGAAGAAGCTAAGCTGCGAAGTGGCGGAATTGATAGCAGAGGGATTGAAAATCGAGCCAAGAAACGCAATAAGCAAGCTCCTAAACGACGAGAAAAGCGACTGTTGTTTCAGAGTGAACCACTACCCGCCATGTCCGGACCTCCAAGCTGTAGGCGGAAGTGGAAGGAACATGATCGGATTCGGGGAACACACAGACTCACAAATCATATCACTACTAAGATCAAACAATTCGACCGACCTACAAATCTGCCTCAGAGACATCGCGTGGGTGTCAGTGCCGCTGGACGCGGCGACGATCTTCGTGAACGTCGGCGACGCGCTGTAGGTGATGAGCAACGACATATTCAAAAGCGTGAAGCACAAAGTGGTGGCGGATTCCAACAGAGAGAGGGTTTTGATGATTTACTTCAGAGGGCCACCATTGAGTGA

Coding sequence (CDS)

ATGTACGCCCTAATTAAATTTGGAAAGCTCGCAGCGTCGAGACATTGTGGAGGTAGTGTCTCGACGCTGCCTCGAATTCAGCGCCGTCGCGAAGGAGTACGTCATGGCAGTGAAGAAGCTAAGCTGCGAAGTGGCGGAATTGATAGCAGAGGGATTGAAAATCGAGCCAAGAAACGCAATAAGCAAGCTCCTAAACGACGAGAAAAGCGACTGTTGTTTCAGAGTGAACCACTACCCGCCATGTCCGGACCTCCAAGCTGTAGGCGGAAGTGGAAGGAACATGATCGGATTCGGGGAACACACAGACTCACAAATCATATCACTACTAAGATCAAACAATTCGACCGACCTACAAATCTGCCTCAGAGACATCGCGTGGGTGTCAGTGCCGCTGGACGCGGCGACGATCTTCGTGAACGTCGGCGACGCGCTGTAGGTGATGAGCAACGACATATTCAAAAGCGTGAAGCACAAAGTGGTGGCGGATTCCAACAGAGAGAGGGTTTTGATGATTTACTTCAGAGGGCCACCATTGAGTGA

Protein sequence

MYALIKFGKLAASRHCGGSVSTLPRIQRRREGVRHGSEEAKLRSGGIDSRGIENRAKKRNKQAPKRREKRLLFQSEPLPAMSGPPSCRRKWKEHDRIRGTHRLTNHITTKIKQFDRPTNLPQRHRVGVSAAGRGDDLRERRRRAVGDEQRHIQKREAQSGGGFQQREGFDDLLQRATIE

Homology

The following BLAST results are available for this feature:

BLAST of Lag0022176 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0022176 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0022176.1	Lag0022176.1	mRNA