Lag0022175 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0022175
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ty3/gypsy retrotransposon protein
Location	chr7: 20396983 .. 20399967 (-)
RNA-Seq Expression	Lag0022175
Synteny	Lag0022175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGGGTTTGCTGAACGAAAGAGAGAAAACAAGAGAGAGGAAAAGATATTACCATGCGTTAAACAGAGAAAACTTGAGCTTTGGGTTTCCCTCGCAGCTAATCGACAACACGAAGAGAGGGAGAAAAAGAAGGGTGGCGACGGAGGAAGAAGGAACAGAGGCAGTGGCGGCGGTGGCTGTGCGTGGCGGCTGGCAGCATGCGGCAGCAGGCGACGGCGGCGTGGAGAAAACGAGGGGGAGGCGGCGTGGCTGAGCGGTGTGGTCACACGAGGGAGAGAGAGAGACTTGCGAGAGAGAGAGATTGTCGGAGGAGAAGAAATTTCAGGGGGGGTTGGACGCACGAGGGAGAGAGGAAGGGAGAATGAAGGTTAGGGCTTGTTGAGGTCTTTCTTTTTCTTTTCTTTTTTTTAATCCCTTAACTCCAATAAATGCCCACTAAGCAGAAAAAGCGCACGATACATTCCCCACTAGTCTTGCGAAAACTAACTAACACCAACCACTCAGCATCAACACACGAGAAGGAGGGGAAAATAAAATATCCCATTTGGATTTAAAATATCAATTAAAGGTTAAACTTAAATTCCAATTGAATTTAAACCTGATTAATCCAAAATGACATAGTTTTTAAACGCGGGGCGTTACAAACTCCCAACCTTTAAAAACTTTCGTCCTCGAAAGTTGCCTGCCTAGTTTCTTTGAATGATTGACGTTGATCTCAACTTTTTCTTTTCCAAGGCAGTTCTTTCAAGCAACTTTCTGTTAGACCCCCAATAGTGCACACGTATGCAAGGAGGGGTAGGGGAGGAAATTCACCCTCGATCTAGGCGGTTAATAGAGGATAAATAGAAAGTTTAGTGTAATATAAATAGCTGGTGGTCAATCGGTGTAATCGGTGGGGTTATCTAAATTTTGGGCAGTATATATTGTATTTTGTTGGGAGGATTAGGGGACATGAAAATCCTTAGTTTGTATACTCTTATCTAAGATGATAAGAGAGTGGGAGACCTCACCATCTCAAACTGGTGTTTGTATTTGACCCTTGTTGATAAATAAAAGCTTTCCTACTAGCTTCCTCACTACCTGTAAATCGGAATCCTAACATTCTGGTATCAGAGCATGTCATCCTGGGTAAGACACGGGGTATGGCGCACAAACAACTGGAGGAGCGGGTAGCAGAATCTGAGAAACATGTCGAAGGTATGAAAGAAAAATTTCCTGAATTAGAAAATTCTGTAGCAGAATTGAATAAAAGTATGGAAAAGTTGTTTAATAGTATGGAAGATCAACGACAAATAACAATAGAAAATCAAAAGGCGTTAGCAAATTTGCTACAAGGAGGGTTTAAAGTCAGCCCTAGCGGGGAAAAAGAGTTCGGACAAAAGCGGAAAATTGAGGAAGATGTAAGCGCTTCCTCTAGTCGAAAGGAACCCAGGGGAGAAGAAAATTTCCATGATCGACAGAAATTCAAGAAGGTAGAAATGCCTACCTTCGAAGGAGACTACCCAGACGATTGGCTTTTTCAAGCAGAACGCTATTTCGACATACACCAATTATCAGATCCGGAGAAGGTCGTGGTATCCGCAGTAAGCTTCGCCGAAGTAGCTTTAAGGTGGTACCGGTGGGCTGAGAGCCGAAGTCCGTTCACAAGCTGGAGAAATCTGAAATACCGAGTACTGGAGCGATTCAGGCCAACGCAAGAAGGGACCCTCTGTGCTCGATTCCTTTCCATTAGGCAAGAGAAGACAGTGGTCGAATATCGGGAGAAATTTGAAGCCCTCGCAACCCCCCTTCCACAGCTATCTGAGGAAGTCCTTGAAAACACGTTCCTTAACGGATGGTTACCGGCTATAAGATCTGAAGTCCTGTGTTTTGAACCCATGGGCCTGGAAGCCATCATGAAGGCGGTCCAAAGAATAGAAGACAAGAATCGGGCCATTGAATCTAAGACTAGTTTCGGCCCAGGAAGATTGTGGAAAAATCCCATCACCAGCCATGCAAATCCACCGAAGTTAATTGAACAAAACCCCATTAAAACCATCACTTTACCCAATAACCCGTCCCATCCACCGAAAGAAACACCACTTAGACGCCTATCAGACTCTGAAATGCAATTAAGAAGAGAAAAGGGTCTGTGTTACAGGTGTGATGAGAAGTTCCACATGGGACACAAATGTAAAGGAAAAGAGTTAAAGGTACTTCTGGTAGCAGACGAGGAACCAGAACAACCATTTTCCAAAGAAAAAGAAACTACAGAGTGTCGGGTAGAAGAAGTCGAAGATCCTACTGTGGAAGTCGACATGGTCGAACTCTCCATTAACACCGTAGTTGGATTTTCTTCTCCTGGAACGATGAAAGTAAAAGGGAGAATCGAAGACAAAGAGATGGTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGTGGATTGTGGAGCAACACACAATTTCATTTCGCAAAAGCTAATCGAAGATATGAAGTTACCAGTGACAGAGACGATGAACTATGGCATTATCATGGGAACAAGAACCGCAGTGAAAGGAAAAGGTATTTGTAAAAAGATTGTGATCGCATTGGATGGAATCACCGTTGCTGAAGATTTTTTACCCATAGAGTTGAGTGGGGTTGATGTAATATTAGGAATGCAGTGGCTGAGAACTCTAGGAGTAACGACTATTGACTGGAAAACTCTAACGATGGAGATCAAAGTAGGAGATTCCAAGATTACCCTCAAGGGAGATCCCTCCTTGACCAAGACAGAAGTATCGCTTAAACAACTTAAGCGAACATGGGGCAAACACGATCAAGGCTTCTTAGTTGAATTAAGAGCAATTACAGCAGCAGTGGGTGACCCGGCTGTTTTTACGCGATTCCGCCATCACCGAACCCACCCATCGTGGACCAATTATTAG

mRNA sequence

ATGCACGGGTTTGCTGAACGAAAGAGAGAAAACAAGAGAGAGGAAAAGATATTACCATGCGTTAAACAGAGAAAACTTGAGCTTTGGGTTTCCCTCGCAGCTAATCGACAACACGAAGAGAGGGAGAAAAAGAAGGGTGGCGACGGAGGAAGAAGGAACAGAGGCAGTGGCGGCGGTGGCTGTGCGTGGCGGCTGGCAGCATGCGGCAGCAGGCGACGGCGGCGTGGAGAAAACGAGGGGGAGGCGGCGTGGCTGAGCGGTGTGGTCACACGAGGGAGAGAGAGAGACTTGCGAGAGAGAGAGATTGTCGGAGGAGAAGAAATTTCAGGGGGGGTTGGACGCACGAGGGAGAGAGGAAGGGAGAATGAAGAGCATGTCATCCTGGGTAAGACACGGGGTATGGCGCACAAACAACTGGAGGAGCGGGTAGCAGAATCTGAGAAACATGTCGAAGGTATGAAAGAAAAATTTCCTGAATTAGAAAATTCTGTAGCAGAATTGAATAAAAGTATGGAAAAGTTGTTTAATAGTATGGAAGATCAACGACAAATAACAATAGAAAATCAAAAGGCGTTAGCAAATTTGCTACAAGGAGGGTTTAAAGTCAGCCCTAGCGGGGAAAAAGAGTTCGGACAAAAGCGGAAAATTGAGGAAGATGTAAGCGCTTCCTCTAGTCGAAAGGAACCCAGGGGAGAAGAAAATTTCCATGATCGACAGAAATTCAAGAAGGTAGAAATGCCTACCTTCGAAGGAGACTACCCAGACGATTGGCTTTTTCAAGCAGAACGCTATTTCGACATACACCAATTATCAGATCCGGAGAAGGTCGTGGTATCCGCAGTAAGCTTCGCCGAAGTAGCTTTAAGGTGGTACCGGTGGGCTGAGAGCCGAAGTCCGTTCACAAGCTGGAGAAATCTGAAATACCGAGTACTGGAGCGATTCAGGCCAACGCAAGAAGGGACCCTCTGTGCTCGATTCCTTTCCATTAGGCAAGAGAAGACAGTGGTCGAATATCGGGAGAAATTTGAAGCCCTCGCAACCCCCCTTCCACAGCTATCTGAGGAAGTCCTTGAAAACACGTTCCTTAACGGATGGTTACCGGCTATAAGATCTGAAGTCCTGTGTTTTGAACCCATGGGCCTGGAAGCCATCATGAAGGCGGTCCAAAGAATAGAAGACAAGAATCGGGCCATTGAATCTAAGACTAGTTTCGGCCCAGGAAGATTGTGGAAAAATCCCATCACCAGCCATGCAAATCCACCGAAGTTAATTGAACAAAACCCCATTAAAACCATCACTTTACCCAATAACCCGTCCCATCCACCGAAAGAAACACCACTTAGACGCCTATCAGACTCTGAAATGCAATTAAGAAGAGAAAAGGGTCTGTGTTACAGGTGTGATGAGAAGTTCCACATGGGACACAAATGTAAAGGAAAAGAGTTAAAGGTACTTCTGGTAGCAGACGAGGAACCAGAACAACCATTTTCCAAAGAAAAAGAAACTACAGAGTGTCGGGTAGAAGAAGTCGAAGATCCTACTGTGGAAGTCGACATGGTCGAACTCTCCATTAACACCGTAGTTGGATTTTCTTCTCCTGGAACGATGAAAGTAAAAGGGAGAATCGAAGACAAAGAGATGCTAATCGAAGATATGAAGTTACCAGTGACAGAGACGATGAACTATGGCATTATCATGGGAACAAGAACCGCAGTGAAAGGAAAAGGTATTTGTAAAAAGATTGTGATCGCATTGGATGGAATCACCGTTGCTGAAGATTTTTTACCCATAGAGTTGAGTGGGGTTGATGTAATATTAGGAATGCAGTGGCTGAGAACTCTAGGAGTAACGACTATTGACTGGAAAACTCTAACGATGGAGATCAAAGTAGGAGATTCCAAGATTACCCTCAAGGGAGATCCCTCCTTGACCAAGACAGAAGTATCGCTTAAACAACTTAAGCGAACATGGGGCAAACACGATCAAGGCTTCTTAGTTGAATTAAGAGCAATTACAGCAGCAGTGGGTGACCCGGCTGTTTTTACGCGATTCCGCCATCACCGAACCCACCCATCGTGGACCAATTATTAG

Coding sequence (CDS)

ATGCACGGGTTTGCTGAACGAAAGAGAGAAAACAAGAGAGAGGAAAAGATATTACCATGCGTTAAACAGAGAAAACTTGAGCTTTGGGTTTCCCTCGCAGCTAATCGACAACACGAAGAGAGGGAGAAAAAGAAGGGTGGCGACGGAGGAAGAAGGAACAGAGGCAGTGGCGGCGGTGGCTGTGCGTGGCGGCTGGCAGCATGCGGCAGCAGGCGACGGCGGCGTGGAGAAAACGAGGGGGAGGCGGCGTGGCTGAGCGGTGTGGTCACACGAGGGAGAGAGAGAGACTTGCGAGAGAGAGAGATTGTCGGAGGAGAAGAAATTTCAGGGGGGGTTGGACGCACGAGGGAGAGAGGAAGGGAGAATGAAGAGCATGTCATCCTGGGTAAGACACGGGGTATGGCGCACAAACAACTGGAGGAGCGGGTAGCAGAATCTGAGAAACATGTCGAAGGTATGAAAGAAAAATTTCCTGAATTAGAAAATTCTGTAGCAGAATTGAATAAAAGTATGGAAAAGTTGTTTAATAGTATGGAAGATCAACGACAAATAACAATAGAAAATCAAAAGGCGTTAGCAAATTTGCTACAAGGAGGGTTTAAAGTCAGCCCTAGCGGGGAAAAAGAGTTCGGACAAAAGCGGAAAATTGAGGAAGATGTAAGCGCTTCCTCTAGTCGAAAGGAACCCAGGGGAGAAGAAAATTTCCATGATCGACAGAAATTCAAGAAGGTAGAAATGCCTACCTTCGAAGGAGACTACCCAGACGATTGGCTTTTTCAAGCAGAACGCTATTTCGACATACACCAATTATCAGATCCGGAGAAGGTCGTGGTATCCGCAGTAAGCTTCGCCGAAGTAGCTTTAAGGTGGTACCGGTGGGCTGAGAGCCGAAGTCCGTTCACAAGCTGGAGAAATCTGAAATACCGAGTACTGGAGCGATTCAGGCCAACGCAAGAAGGGACCCTCTGTGCTCGATTCCTTTCCATTAGGCAAGAGAAGACAGTGGTCGAATATCGGGAGAAATTTGAAGCCCTCGCAACCCCCCTTCCACAGCTATCTGAGGAAGTCCTTGAAAACACGTTCCTTAACGGATGGTTACCGGCTATAAGATCTGAAGTCCTGTGTTTTGAACCCATGGGCCTGGAAGCCATCATGAAGGCGGTCCAAAGAATAGAAGACAAGAATCGGGCCATTGAATCTAAGACTAGTTTCGGCCCAGGAAGATTGTGGAAAAATCCCATCACCAGCCATGCAAATCCACCGAAGTTAATTGAACAAAACCCCATTAAAACCATCACTTTACCCAATAACCCGTCCCATCCACCGAAAGAAACACCACTTAGACGCCTATCAGACTCTGAAATGCAATTAAGAAGAGAAAAGGGTCTGTGTTACAGGTGTGATGAGAAGTTCCACATGGGACACAAATGTAAAGGAAAAGAGTTAAAGGTACTTCTGGTAGCAGACGAGGAACCAGAACAACCATTTTCCAAAGAAAAAGAAACTACAGAGTGTCGGGTAGAAGAAGTCGAAGATCCTACTGTGGAAGTCGACATGGTCGAACTCTCCATTAACACCGTAGTTGGATTTTCTTCTCCTGGAACGATGAAAGTAAAAGGGAGAATCGAAGACAAAGAGATGCTAATCGAAGATATGAAGTTACCAGTGACAGAGACGATGAACTATGGCATTATCATGGGAACAAGAACCGCAGTGAAAGGAAAAGGTATTTGTAAAAAGATTGTGATCGCATTGGATGGAATCACCGTTGCTGAAGATTTTTTACCCATAGAGTTGAGTGGGGTTGATGTAATATTAGGAATGCAGTGGCTGAGAACTCTAGGAGTAACGACTATTGACTGGAAAACTCTAACGATGGAGATCAAAGTAGGAGATTCCAAGATTACCCTCAAGGGAGATCCCTCCTTGACCAAGACAGAAGTATCGCTTAAACAACTTAAGCGAACATGGGGCAAACACGATCAAGGCTTCTTAGTTGAATTAAGAGCAATTACAGCAGCAGTGGGTGACCCGGCTGTTTTTACGCGATTCCGCCATCACCGAACCCACCCATCGTGGACCAATTATTAG

Protein sequence

MHGFAERKRENKREEKILPCVKQRKLELWVSLAANRQHEEREKKKGGDGGRRNRGSGGGGCAWRLAACGSRRRRRGENEGEAAWLSGVVTRGRERDLREREIVGGEEISGGVGRTRERGRENEEHVILGKTRGMAHKQLEERVAESEKHVEGMKEKFPELENSVAELNKSMEKLFNSMEDQRQITIENQKALANLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFKKVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTSWRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFLNGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKNRAIESKTSFGPGRLWKNPITSHANPPKLIEQNPIKTITLPNNPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEKFHMGHKCKGKELKVLLVADEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSINTVVGFSSPGTMKVKGRIEDKEMLIEDMKLPVTETMNYGIIMGTRTAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIKVGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAAVGDPAVFTRFRHHRTHPSWTNY

Homology

[Close]

BLAST of Lag0022175 vs. NCBI nr
Match: KAA0052232.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 8.1e-115
Identity = 251/585 (42.91%), Postives = 357/585 (61.03%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ ++   +EN +DR KFK
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNG-KASSSHDIGETSAERKADSDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F E AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDEPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE T+ EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTMEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +  GL  +M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKSKGLAEMMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGMK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E TE RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNNNEELEIVEETEAENTELRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                +I  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIITSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. NCBI nr
Match: KAA0065392.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 424.5 bits (1090), Expect = 1.8e-114
Identity = 251/585 (42.91%), Postives = 355/585 (60.68%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ K+   +EN +DR KFK
Sbjct: 61  ANAKERTMTGERINESDIQNSPTTKSKNG-KASSSHDIGETSAEKKTDPDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F   AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE TV EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +P GL   M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKPKGLAEKMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGTK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E  E RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNDNEELEIVEEAEAENAEMRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                ++  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIVTSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. NCBI nr
Match: KAA0048423.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 4.0e-114
Identity = 250/585 (42.74%), Postives = 355/585 (60.68%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ ++   +EN +DR KFK
Sbjct: 61  ANAKERAMTGERINESDIQNSPATKSKNG-KASSSHDIGETSAERKTDSDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F   AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE TV EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +P GL   M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKPKGLAEKMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGMK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E  E RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNDNEELEIVEETEAENAEMRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                ++  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIVTSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. NCBI nr
Match: TYK30083.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 4.0e-114
Identity = 250/585 (42.74%), Postives = 355/585 (60.68%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ ++   +EN +DR KFK
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNG-KASSSHDIGETSAERKTDSDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F   AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE TV EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +P GL   M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKPKGLAEKMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGMK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E  E RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNDNEELEIVEETEAENAEMRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                ++  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIVTSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. NCBI nr
Match: KAA0032454.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99900.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 4.0e-114
Identity = 250/585 (42.74%), Postives = 355/585 (60.68%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ ++   +EN +DR KFK
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNG-KASSSHDIGETSAERKTDSDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F   AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE TV EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +P GL   M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKPKGLAEKMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGMK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E  E RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNDNEELEIVEETEAENAEMRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                ++  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIVTSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. ExPASy TrEMBL
Match: A0A5A7U908 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00450 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 3.9e-115
Identity = 251/585 (42.91%), Postives = 357/585 (61.03%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ ++   +EN +DR KFK
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNG-KASSSHDIGETSAERKADSDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F E AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDEPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE T+ EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTMEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +  GL  +M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKSKGLAEMMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGMK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E TE RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNNNEELEIVEETEAENTELRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                +I  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIITSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. ExPASy TrEMBL
Match: A0A5A7VAR4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00620 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 8.7e-115
Identity = 251/585 (42.91%), Postives = 355/585 (60.68%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ K+   +EN +DR KFK
Sbjct: 61  ANAKERTMTGERINESDIQNSPTTKSKNG-KASSSHDIGETSAEKKTDPDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F   AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE TV EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +P GL   M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKPKGLAEKMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGTK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E  E RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNDNEELEIVEEAEAENAEMRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                ++  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIVTSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. ExPASy TrEMBL
Match: A0A5A7SMQ7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00120 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.9e-114
Identity = 250/585 (42.74%), Postives = 355/585 (60.68%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ ++   +EN +DR KFK
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNG-KASSSHDIGETSAERKTDSDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F   AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE TV EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +P GL   M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKPKGLAEKMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGMK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E  E RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNDNEELEIVEETEAENAEMRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                ++  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIVTSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. ExPASy TrEMBL
Match: A0A5D3DYS4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00230 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.9e-114
Identity = 250/585 (42.74%), Postives = 355/585 (60.68%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ ++   +EN +DR KFK
Sbjct: 61  ANAKERAMTGERINESDIQNSPATKSKNG-KASSSHDIGETSAERKTDSDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F   AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE TV EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +P GL   M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKPKGLAEKMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGMK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E  E RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNDNEELEIVEETEAENAEMRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                ++  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIVTSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. ExPASy TrEMBL
Match: A0A5A7TXP9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001500 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.9e-114
Identity = 250/585 (42.74%), Postives = 355/585 (60.68%), Query Frame = 0


Query: 134 MAHKQLEERVAESEKHVEGMKE---KFPELENSVAELNKSMEKLFNSMEDQRQITIENQK 193
           M   ++EER+   E+ + G+K+   K P +E+++ E+ K+ME +    E Q+Q  +   +
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 194 ALA--------NLLQGGFKVSPSGEKEFGQKRKIEEDVSASSSRKEPRGEENFHDRQKFK 253
           A A         + +   + SP+ + + G K     D+  +S+ ++   +EN +DR KFK
Sbjct: 61  ANAKERAMTGERINESDIQNSPATKSKNG-KASSSHDIGETSAERKTDSDENTNDRSKFK 120

Query: 254 KVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTS 313
           KVEMP F G+ P+ WLF+AERYF IH+L++ EK++VS + F   AL WYR  E R  F S
Sbjct: 121 KVEMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRSQEEREKFAS 180

Query: 314 WRNLKYRVLERFRPTQEGTLCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFL 373
           W NLK R+L RF+ T+EGT+C RFL I+QE TV EYR +F+ L  PL  L + V+E TF+
Sbjct: 181 WTNLKERLLVRFQSTREGTVCGRFLRIQQETTVEEYRNRFDKLVAPLSDLEDRVVEETFM 240

Query: 374 NGWLPAIRSEVLCFEPMGLEAIMKAVQRIEDKN--RAIESKTSFGPGRLWKNPITSHANP 433
            G  P IR+EV+  +P GL   M   Q +ED+   R   +  S+  G+  ++ ITS    
Sbjct: 241 TGLFPWIRAEVILCKPKGLAEKMLTAQLVEDREILRNAANLNSYIGGK--QSAITSTGMK 300

Query: 434 PKLIEQN---------PIKTITLPN-NPSHPPKETPLRRLSDSEMQLRREKGLCYRCDEK 493
               +QN         PI+TITL + NP    KE   +RL D+E QLR+EKGLC++C+EK
Sbjct: 301 HSYYQQNKESKTNASFPIRTITLKSPNPGEIRKEGTSKRLPDAEFQLRKEKGLCFKCNEK 360

Query: 494 FHMGHKCKGK---ELKVLLVA--DEEPEQPFSKEKETTECRVEEVEDPTVEVDMVELSIN 553
           +   HKCK K   EL++ +V   +EE E     E E  E RV EV+  T     VELSIN
Sbjct: 361 YSADHKCKMKEQRELRMFVVKNDNEELEIVEETEAENAEMRVAEVQPHT--TTYVELSIN 420

Query: 554 TVVGFSSPGTMKVKGRIEDKEM----------------LIEDMKLPVTETMNYGIIMGTR 613
           +VVG + PGTMKVKG ++ KE+                ++  ++LP+ ET +YG+I+G+ 
Sbjct: 421 SVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFVSEKIVTSLQLPIKETAHYGVILGSG 480

Query: 614 TAVKGKGICKKIVIALDGITVAEDFLPIELSGVDVILGMQWLRTLGVTTIDWKTLTMEIK 673
           TA++GKGIC+ + I +   TV EDFLP+EL GVDVILGMQWL +LGVT  DWK LT+   
Sbjct: 481 TAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFY 540

Query: 674 VGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRAITAA 675
             + +I +KGDPSLTK  VSLK L +TW +HD G+L+E R++  A
Sbjct: 541 DNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSVEVA 580

[Close]

BLAST of Lag0022175 vs. TAIR 10
Match: AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding )

HSP 1 Score: 61.6 bits (148), Expect = 2.8e-09
Identity = 90/413 (21.79%), Postives = 152/413 (36.80%), Query Frame = 0


Query: 262 ERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFTSWRNLKYRVLERFRPTQEGT 321
           E YF  + + + E++ +   +      +W +    ++  TSW+  K  +    + T +  
Sbjct: 279 ENYFGENNIPEQERLQIVYSNLEGDIGQWIKHLWKKNSPTSWKEFKCMMARETKTTMKVN 338

Query: 322 LCARFLSIRQEKTVVEYREKFEALATPLPQLSEEVLENTFLNGWLPAIRSEVLCFEPMGL 381
               +  I+QE +V EYRE+FEAL      L  + LE  FL G  P++++ V   +P G+
Sbjct: 339 HQPHYSGIQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKPNGI 398

Query: 382 EAIMKAVQRIEDKNRAIESKTSFGPGRLWKNPITSHANPPKL--IEQNPIKTITLPNNPS 441
             +M   Q +E+ N    S   +G G        S    PK+    Q  ++++ L     
Sbjct: 399 VQMMDTAQWLEESN----SLMVYGSG-------LSVQTEPKVYPTTQAELRSMVLMGYMR 458

Query: 442 HPPKETPLRRLSDSEMQLRREKGLCYRCDEKFHMGHKCKGKELKVLLVADEEPEQPFSKE 501
              K+TP R  ++    L++E              H+  G E+                 
Sbjct: 459 EDLKDTP-RPANEDTGTLKQE--------------HELPGTEV----------------- 518

Query: 502 KETTECRVEEVEDPTVEVDMVELSINTVVGFSSPGTMKVKGRIEDKEMLIEDMKLPVTET 561
                CR                             M+  G I  +E             
Sbjct: 519 ---ATCR----------------------------GMRFYGYILQQE------------- 578

Query: 562 MNYGIIMGTRTAVKGKGICKKIVIALDGITVAEDFLPIELSG--VDVILGMQWLRTLGVT 621
               +    R A   K  C++I + ++ I + ED+   +L    VDVILG +WL  LG T
Sbjct: 579 ----VSFSYRLASDVKRSCQEISLRINDIDIVEDYCVWDLKRDVVDVILGYEWLSKLGET 598

Query: 622 TIDWKTLTMEIKVGDSKITLKGDPSLTKTEVSLKQLKRTWGKHDQGFLVELRA 671
            ++W+  +         +TL   P     E   K++K    K   G   EL +
Sbjct: 639 EVNWQNQSFSFIHNQDWVTL--CPKNKDLEQGTKRVKMRSEKEQGGMRNELES 598

[Close]

BLAST of Lag0022175 vs. TAIR 10
Match: AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 5.4e-08
Identity = 25/77 (32.47%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 242 KKVEMPTFEGDYPDDWLFQAERYFDIHQLSDPEKVVVSAVSFAEVALRWYRWAESRSPFT 301
           +++EMP F+G    +W  + ER+F + +  D +K+ + A+S   VAL+W+    S   F 
Sbjct: 108 RRIEMPVFDGSGVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKWFLREMSTLEFR 167

Query: 302 SWRNLKYRVLERFRPTQ 319
            W + + R+L RF P +
Sbjct: 168 DWNSFEQRLLARFDPVK 184

[Close]

BLAST of Lag0022175 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 53.9 bits (128), Expect = 5.9e-07
Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 0


Query: 544 DKEMLIE---DMKLPVTETMNYGIIMGTRTAVKGKGICKKIVIALDGITVAEDFLPIEL- 603
           D  +L+E    +KLP + T    +++G R  ++  G C  I + +  + + E+FL ++L 
Sbjct: 145 DNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLA 204

Query: 604 -SGVDVILGMQWLRTLGVTTIDWKTLTMEIKVGDSKITL 638
            + VDVILG +WL  LG T ++W+            ITL
Sbjct: 205 KTDVDVILGYEWLSKLGETMVNWQNQDFSFSHNQQWITL 243

The following BLAST results are available for this feature:

BLAST of Lag0022175 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052232.1	8.1e-115	42.91	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0065392.1	1.8e-114	42.91	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048423.1	4.0e-114	42.74	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK30083.1	4.0e-114	42.74	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032454.1	4.0e-114	42.74	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99900.1 Ty3/gyp...	[more]

BLAST of Lag0022175 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0022175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U908	3.9e-115	42.91	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7VAR4	8.7e-115	42.91	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7SMQ7	1.9e-114	42.74	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DYS4	1.9e-114	42.74	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TXP9	1.9e-114	42.74	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Lag0022175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42723.1	2.8e-09	21.79	aminoacyl-tRNA ligases;ATP binding;nucleotide binding	[more]
AT1G67020.1	5.4e-08	32.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G29750.1	5.9e-07	31.31	Eukaryotic aspartyl protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 381..401
None	No IPR available	COILS	Coil	Coil	coord: 136..184
None	No IPR available	PFAM	PF08284	RVP_2	coord: 552..613 e-value: 1.6E-6 score: 27.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..453
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..51
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 226..670
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 226..670
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 545..612 e-value: 8.80451E-6 score: 42.7088
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 280..364 e-value: 1.4E-12 score: 47.7
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 544..639 e-value: 1.4E-7 score: 33.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0022175.1	Lag0022175.1	mRNA