Lag0022115 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGTTTAAAAAGCTTACATTTGGGAAAAATTTTGCATGTCGTCGATCCTAAGCCAGAGATTCTTGTTGAGTCGGATGCAACCGAGGTGATTAATTTCTTAGTCGGGAAAGAAGAATATTTCACAGAGATCAAGAATTTGCTGGAGGAGATTCTCCAAATCTCTGTTTTGATCGATGAAGTGTCCTTTGCAAAGTGCACATGCTCGAGCAATGAACCAGCCCACCACCTAGCTCGTGCAACGATCTCTAGAAATGAATTATTTTGCCAAAATTCTTCCTCCATGGAGGAAGAAGAGTCGGGTTGTAGAATGGGTTTTTGGGAGGGAGAGGGAACTTTTCCCACGTGGGTCTCCTCTTTGATGGAGGAGGTCAGAGGACACTTTTTTTTTTTTTGAAAAAAGGTCAGAGGATACTTGTACCTAATGCTTTTCTTTTAATGAATTTTGCTATTCAAAAAAAAAAAAAGAAAAGTAACAAATCTGACAGACTAGCCATGGAATTTTGCTAGACGGTGCCCTCGGGAGAGATTTTCGGCCATTATGGTCGGATCATTATCGGATTTTACGTTTGCAATTCTTCCCTTGCCAGCCTCGCACTTGCAGATTGGATCGTTCATTCCCTCTTTAATTTTCAGGATTACGATGGCCATTTTCCGGGCTAATTTGGTTCTGCCGTTGCCAAATCTGACAGACTGACTATGGGATTGTTCAGCTTTACGGTTGCTATTTCAAGGGGTTTATGGACTTGTGTTTCATCATCGATTCCAGCTTCCAGTTGCAAGGATCTTCTGTCGTGTTTTTTTTCTGTTTACTTCTCTATTCCAGTTTTTCTGAACATGGATCCTTTAGCCCTTGTTGAGGACTGGTCTAAATTGAGCCTAACCTCTGCAGAAGAAGATGTGTCAGTTGATGTTGATCGCTCGGCTATTGATAGAACTAGCCAAATGTTGGGTTGCTGCCTCCTTGGTAAACTTTTGTCTCATCGTCATCTTACTCCAGAAGTTATGCGGAAAAATTATAAGGTGGCATGGAAGATAGATCATGGCTTGCAAGTTGAACTCTTAGGCAGAAATATCTTCCTATTTTGCTTTAATGAGGAAGATGATCGAGTTCGGGTGCTCAACCAAGGACCGTAG ATGGAAGGTTTAAAAAGCTTACATTTGGGAAAAATTTTGCATGTCGTCGATCCTAAGCCAGAGATTCTTGTTGAGTCGGATGCAACCGAGGTGATTAATTTCTTAGTCGGGAAAGAAGAATATTTCACAGAGATCAAGAATTTGCTGGAGGAGATTCTCCAAATCTCTGTTTTGATCGATGAAGTGTCCTTTGCAAAGTGCACATGCTCGAGCAATGAACCAGCCCACCACCTAGCTCGTGCAACGATCTCTAGAAATGAATTATTTTGCCAAAATTCTTCCTCCATGGAGGAAGAAGAGTCGGGTTGTAGAATGGGTTTTTGGGAGGGAGAGGGAACTTTTCCCACACTGACTATGGGATTGTTCAGCTTTACGGTTGCTATTTCAAGGGGTTTATGGACTTGTGTTTCATCATCGATTCCAGCTTCCAGTTGCAAGGATCTTCTGTCGTGTTTTTTTTCTGTTTACTTCTCTATTCCAGTTTTTCTGAACATGGATCCTTTAGCCCTTGTTGAGGACTGGTCTAAATTGAGCCTAACCTCTGCAGAAGAAGATGTGTCAGTTGATGTTGATCGCTCGGCTATTGATAGAACTAGCCAAATGTTGGGTTGCTGCCTCCTTGGTAAACTTTTGTCTCATCGTCATCTTACTCCAGAAGTTATGCGGAAAAATTATAAGGTGGCATGGAAGATAGATCATGGCTTGCAAGTTGAACTCTTAGGCAGAAATATCTTCCTATTTTGCTTTAATGAGGAAGATGATCGAGTTCGGGTGCTCAACCAAGGACCGTAG ATGGAAGGTTTAAAAAGCTTACATTTGGGAAAAATTTTGCATGTCGTCGATCCTAAGCCAGAGATTCTTGTTGAGTCGGATGCAACCGAGGTGATTAATTTCTTAGTCGGGAAAGAAGAATATTTCACAGAGATCAAGAATTTGCTGGAGGAGATTCTCCAAATCTCTGTTTTGATCGATGAAGTGTCCTTTGCAAAGTGCACATGCTCGAGCAATGAACCAGCCCACCACCTAGCTCGTGCAACGATCTCTAGAAATGAATTATTTTGCCAAAATTCTTCCTCCATGGAGGAAGAAGAGTCGGGTTGTAGAATGGGTTTTTGGGAGGGAGAGGGAACTTTTCCCACACTGACTATGGGATTGTTCAGCTTTACGGTTGCTATTTCAAGGGGTTTATGGACTTGTGTTTCATCATCGATTCCAGCTTCCAGTTGCAAGGATCTTCTGTCGTGTTTTTTTTCTGTTTACTTCTCTATTCCAGTTTTTCTGAACATGGATCCTTTAGCCCTTGTTGAGGACTGGTCTAAATTGAGCCTAACCTCTGCAGAAGAAGATGTGTCAGTTGATGTTGATCGCTCGGCTATTGATAGAACTAGCCAAATGTTGGGTTGCTGCCTCCTTGGTAAACTTTTGTCTCATCGTCATCTTACTCCAGAAGTTATGCGGAAAAATTATAAGGTGGCATGGAAGATAGATCATGGCTTGCAAGTTGAACTCTTAGGCAGAAATATCTTCCTATTTTGCTTTAATGAGGAAGATGATCGAGTTCGGGTGCTCAACCAAGGACCGTAG MEGLKSLHLGKILHVVDPKPEILVESDATEVINFLVGKEEYFTEIKNLLEEILQISVLIDEVSFAKCTCSSNEPAHHLARATISRNELFCQNSSSMEEEESGCRMGFWEGEGTFPTLTMGLFSFTVAISRGLWTCVSSSIPASSCKDLLSCFFSVYFSIPVFLNMDPLALVEDWSKLSLTSAEEDVSVDVDRSAIDRTSQMLGCCLLGKLLSHRHLTPEVMRKNYKVAWKIDHGLQVELLGRNIFLFCFNEEDDRVRVLNQGP Homology
BLAST of Lag0022115 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-13 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of Lag0022115 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-13 Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Lag0022115 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 75.9 bits (185), Expect = 5.9e-10 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of Lag0022115 vs. NCBI nr
Match: OMP10859.1 (hypothetical protein COLO4_04212 [Corchorus olitorius]) HSP 1 Score: 72.8 bits (177), Expect = 5.0e-09 Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of Lag0022115 vs. NCBI nr
Match: OMO61345.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 71.6 bits (174), Expect = 1.1e-08 Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of Lag0022115 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 5.6e-14 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of Lag0022115 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 5.6e-14 Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Lag0022115 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.9e-10 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of Lag0022115 vs. ExPASy TrEMBL
Match: A0A1R3KUZ6 (DUF4283 domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_04212 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.4e-09 Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of Lag0022115 vs. ExPASy TrEMBL
Match: A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.4e-09 Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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