Lag0022111 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0022111
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr7: 18592700 .. 18593656 (-)
RNA-Seq Expression	Lag0022111
Synteny	Lag0022111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCGAGGTCATCGAAGGGATATCGGCGGAGGCTGGTTGCCAGCCCCGCCGGACGCCATGAAAATCCTGTGCTGGAATGTCCGGGGATTGGGGAATCCTCGGGCATTCCGATCGCTTCGACACGTTGTCAGAAGCGAAAATCCCCTACTGATTTTTCTTTTAGAGACTAAAAGTGATTGTAGAATTGAGTCCAAGTTGAAGAGAGAGCTAAAGTTTGATAATTGTCTGGTGGTTCCAAGCGATGGGAGTTATGGGGGGCTTAGTTTGATCTGGAAGTCGTCCATTCAGGTGTGTGTGAACTCTTATTCGCTTGGTCATATTAATGTCACGGGGAAAGATAGCACAGATTGGTGGAGGTTTACGAGTTTCTATGGGAACCCCTCGGTTGAAAAAAGAAAGGACTCTTGGTCCCTTTTGAAGAGGTTGGTTGATATTGGTAGTGATAATTTGCCTTGGATGATCCTGGGAGGCGATTTTAATGAGTTCATTTTCAGTCATGAGAAATCAGGTGGAGGAGATAGAAGACAGGGGCAGATGGATGATTTTAGGGATGCGGTGAATTATTGCAGATTGTTGGACCCTGGCTTTAAAGACAACAAGTTCACATGGTTTTGAGGGAAGAAAAAAGAGAACAGAATTTGTGAAAGATTGGACAGGTTCTTTATAAATATCCCTTTTCAATCCAAATTCAACAACGTGGAGGTTACTCATCTGAATCGCCATAGCTCTGATCATAGACCAATTGTGGCTTCTCTTGGTTGCGGTGGCAACAGGCCGATCGCGAGGAAGTTGAGGAGCCTTTTGAGGTTTGAGGAATGTTGGACTAAGCACGAAGAGACTAAAAATCTGATTCAGAAAGCCTGGAGTTCAGTGTCTTCCTATAGCGCTGGCGATTGGGCTGCTAAGTCTGCGCTTTGCATCAAGGAATGTCTAGCGTGGAATAAACAGACTTAA

mRNA sequence

ATGCTTCGAGGTCATCGAAGGGATATCGGCGGAGGCTGGTTGCCAGCCCCGCCGGACGCCATGAAAATCCTGTGCTGGAATGTCCGGGGATTGGGGAATCCTCGGGCATTCCGATCGCTTCGACACGTTGTCAGAAGCGAAAATCCCCTACTGATTTTTCTTTTAGAGACTAAAAGTGATTGTAGAATTGAGTCCAAGTTGAAGAGAGAGCTAAAGTTTGATAATTGTCTGGTGGTTCCAAGCGATGGGAGTTATGGGGGGCTTAGTTTGATCTGGAAGTCGTCCATTCAGGTGTGTGTGAACTCTTATTCGCTTGGTCATATTAATGTCACGGGGAAAGATAGCACAGATTGGTGGAGGTTTACGAGTTTCTATGGGAACCCCTCGGTTGAAAAAAGAAAGGACTCTTGGTCCCTTTTGAAGAGGTTGGTTGATATTGGTAGTGATAATTTGCCTTGGATGATCCTGGGAGGCGATTTTAATGAGTTCATTTTCAGTCATGAGAAATCAGGTGGAGGAGATAGAAGACAGGGGCAGATGGATGATTTTAGGGATGCGGTGAATTATTGCAGATTGTTGGACCCTGGCTTTAAAGACAACAAACCAATTGTGGCTTCTCTTGGTTGCGGTGGCAACAGGCCGATCGCGAGGAAGTTGAGGAGCCTTTTGAGGTTTGAGGAATGTTGGACTAAGCACGAAGAGACTAAAAATCTGATTCAGAAAGCCTGGAGTTCAGTGTCTTCCTATAGCGCTGGCGATTGGGCTGCTAAGTCTGCGCTTTGCATCAAGGAATGTCTAGCGTGGAATAAACAGACTTAA

Coding sequence (CDS)

ATGCTTCGAGGTCATCGAAGGGATATCGGCGGAGGCTGGTTGCCAGCCCCGCCGGACGCCATGAAAATCCTGTGCTGGAATGTCCGGGGATTGGGGAATCCTCGGGCATTCCGATCGCTTCGACACGTTGTCAGAAGCGAAAATCCCCTACTGATTTTTCTTTTAGAGACTAAAAGTGATTGTAGAATTGAGTCCAAGTTGAAGAGAGAGCTAAAGTTTGATAATTGTCTGGTGGTTCCAAGCGATGGGAGTTATGGGGGGCTTAGTTTGATCTGGAAGTCGTCCATTCAGGTGTGTGTGAACTCTTATTCGCTTGGTCATATTAATGTCACGGGGAAAGATAGCACAGATTGGTGGAGGTTTACGAGTTTCTATGGGAACCCCTCGGTTGAAAAAAGAAAGGACTCTTGGTCCCTTTTGAAGAGGTTGGTTGATATTGGTAGTGATAATTTGCCTTGGATGATCCTGGGAGGCGATTTTAATGAGTTCATTTTCAGTCATGAGAAATCAGGTGGAGGAGATAGAAGACAGGGGCAGATGGATGATTTTAGGGATGCGGTGAATTATTGCAGATTGTTGGACCCTGGCTTTAAAGACAACAAACCAATTGTGGCTTCTCTTGGTTGCGGTGGCAACAGGCCGATCGCGAGGAAGTTGAGGAGCCTTTTGAGGTTTGAGGAATGTTGGACTAAGCACGAAGAGACTAAAAATCTGATTCAGAAAGCCTGGAGTTCAGTGTCTTCCTATAGCGCTGGCGATTGGGCTGCTAAGTCTGCGCTTTGCATCAAGGAATGTCTAGCGTGGAATAAACAGACTTAA

Protein sequence

MLRGHRRDIGGGWLPAPPDAMKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLKRELKFDNCLVVPSDGSYGGLSLIWKSSIQVCVNSYSLGHINVTGKDSTDWWRFTSFYGNPSVEKRKDSWSLLKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRDAVNYCRLLDPGFKDNKPIVASLGCGGNRPIARKLRSLLRFEECWTKHEETKNLIQKAWSSVSSYSAGDWAAKSALCIKECLAWNKQT

Homology

[Close]

BLAST of Lag0022111 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia])

HSP 1 Score: 183.0 bits (463), Expect = 3.6e-42
Identity = 108/267 (40.45%), Postives = 140/267 (52.43%), Query Frame = 0


Query: 21  MKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLKRELKFDNCLVVP 80
           MK LCWNV GLGNP  FR+LR++VR   P L+FL ETK +  +E + KREL FD C+ V 
Sbjct: 1   MKSLCWNVPGLGNPDTFRTLRNLVRRSQPQLVFLSETKGNPTLEGRAKRELSFDCCVSVA 60

Query: 81  SDGSYGGLSLIWKSSIQVCVNSYSLGHINVTGKDSTDWWRFTSFYGNPSVEKRKDSWSLL 140
           S G  GGL L+W S   V + S S GHI+    D    WRFT FYGNP   KR  SW LL
Sbjct: 61  STGKSGGLMLLWNSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFYGNPCTYKRSASWKLL 120

Query: 141 KRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQM---------DDF---RDAVN 200
           +RL  +   +LPW I+GGDFNE +   EK GG  R + QM         D F      +N
Sbjct: 121 ERLARM--MDLPW-IIGGDFNEIVSMTEKMGGVCRNESQMRGCPIWERLDRFLINESMLN 180

Query: 201 YC-----RLLDPGFKDNKPIVASLGCGGNRPIARKLRSLLRFEECWTKHEETKNLIQKAW 260
            C       L+    D++PI+AS      R      +  +RFEE W + +  +++I   W
Sbjct: 181 KCLNLKVTHLELLSSDHRPILASWDFELPRAWTCHKQRKIRFEESWLQIDGCRDIITGTW 240

Query: 261 SSVSSYSAGDWAAKSALCIKECLAWNK 271
            S+       + AK   C+     WNK
Sbjct: 241 GSLPGIGIEAFQAKICSCLSRLNEWNK 264

[Close]

BLAST of Lag0022111 vs. NCBI nr
Match: XP_030929385.1 (uncharacterized protein LOC115955407 [Quercus lobata])

HSP 1 Score: 179.1 bits (453), Expect = 5.1e-41
Identity = 106/293 (36.18%), Postives = 149/293 (50.85%), Query Frame = 0


Query: 21  MKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLKRELKFDNCLVVP 80
           M+ L WN RGLGNPR+ R LR++V+  +P  +FL ETK   +   + K  + F N LV+P
Sbjct: 1   MRALGWNYRGLGNPRSVRVLRNIVQQWDPDFVFLSETKLRMQSMERKKMSIGFTNGLVIP 60

Query: 81  SDGSYGGLSLIWKSSIQVCVNSYSLGHIN-VTGKDSTDWWRFTSFYGNPSVEKRKDSWSL 140
           S G  GGL+L+W+  I V V S+S  HI+ +  +D    WR T FYGNP V +RK+SW L
Sbjct: 61  SHGRSGGLALLWRKEINVDVQSFSDRHIDAIVTEDRGFKWRITGFYGNPKVHRRKESWEL 120

Query: 141 LKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRDAVNYCRLLDPGFKD 200
           LK L       LPW+   G+FNE + + EK GG  R Q QMDDFR+A+NYCR +D GF  
Sbjct: 121 LKVL--SRKFQLPWLCF-GEFNEIVSTSEKMGGARRSQRQMDDFREAINYCRFMDLGFYG 180

Query: 201 NKPIVASLGCGGNRPIARKLRSLL------------------------------------ 260
            +    ++  G +R   R  R+L+                                    
Sbjct: 181 PEFTWYNMQEGRHRMYLRLDRALVTQDWADHYKDVRVHHLVESMSDHCALLITDSIVLQS 240

Query: 261 ------RFEECWTKHEETKNLIQKAWS-SVSSYSAGDWAAKSALCIKECLAWN 270
                 +FE  WT+ +E +++I+  W+ SV+ YS     A    C  +   WN
Sbjct: 241 PWKRRFQFEAMWTRRDECRDIIRTVWNDSVNLYSPNGMVAGLKQCADDLSRWN 290

[Close]

BLAST of Lag0022111 vs. NCBI nr
Match: XP_030925054.1 (uncharacterized protein LOC115952115 [Quercus lobata])

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-40
Identity = 109/315 (34.60%), Postives = 153/315 (48.57%), Query Frame = 0


Query: 7   RDIGGGWLPAPPDAMKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESK 66
           R+ GGGW PAPP  M  L WN RGLGNP+    L  +VR+++P LIFL+ETK +  +  +
Sbjct: 114 REPGGGWFPAPPGPMSCLSWNCRGLGNPQTKDELVTLVRNKDPKLIFLMETKVEKSVLVR 173

Query: 67  LKRELKFDNCLVVPSDGSYGGLSLIWKSSIQVCVNSYSLGHIN-VTGKDSTDWWRFTSFY 126
           + R++ + N   VP   + GGL+L W +   V V S+S  HI+ +      D WRFT FY
Sbjct: 174 IGRKIHYANLFEVPRHNTGGGLALFWTADSNVDVQSFSENHIDAIIDHGVDDAWRFTGFY 233

Query: 127 GNPSVEKRKDSWSLLKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRD 186
           G+P    R++SWS+L+ L       LPW+ + GDFNE +++ EK G  DR + QM  FRD
Sbjct: 234 GDPETTSRENSWSMLRTLST--RFTLPWLCI-GDFNEILYADEKQGWLDRPERQMQGFRD 293

Query: 187 AVNYCRLLDPGF----------------------------------------------KD 246
           A+++CRL D GF                                               D
Sbjct: 294 ALDFCRLKDLGFNGFPFTWCNRRPGNQNVWIRLDRGVATVDWILKFPTSRIHHLDAFHSD 353

Query: 247 NKPIVASLGCGGNRPIARKLRSLLRFEECWTKHEETKNLIQKAWSSVSSYSAGDWA--AK 273
           +KPI+ S     NR   +K R    FE  W K    + +I+ +W  V    A  W   +K
Sbjct: 354 HKPILLSPDLEQNR-FYKKGRPFW-FEAMWLKDRSCEEVIRDSW-GVGMVQATAWGFNSK 413

[Close]

BLAST of Lag0022111 vs. NCBI nr
Match: XP_030958760.1 (uncharacterized protein LOC115980671 [Quercus lobata])

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-40
Identity = 106/293 (36.18%), Postives = 148/293 (50.51%), Query Frame = 0


Query: 21  MKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLKRELKFDNCLVVP 80
           M+ L WN RGLGNP++ R LR++V+  +P  +FL ETK   R   + K  + F N LV+P
Sbjct: 1   MRALGWNCRGLGNPQSVRVLRNIVQQWDPDFVFLSETKLRVRSMERKKMSIGFTNGLVIP 60

Query: 81  SDGSYGGLSLIWKSSIQVCVNSYSLGHIN-VTGKDSTDWWRFTSFYGNPSVEKRKDSWSL 140
           S G  GGL+L+W+  I V V S+S  HI+ +  +D    WR T FYGNP V +RK+SW L
Sbjct: 61  SHGRSGGLALLWRKEINVDVQSFSDRHIDAIVTEDRGFKWRITGFYGNPEVHRRKESWEL 120

Query: 141 LKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRDAVNYCRLLDPGFKD 200
           LK L       LPW+   GDFNE + + EK GG  R Q QMDDFR+A++ CR +D GF  
Sbjct: 121 LKVL--SRKFQLPWLCF-GDFNEIVSTSEKMGGARRSQRQMDDFREAIDCCRFMDLGFCG 180

Query: 201 NKPIVASLGCGGNRPIARKLRSLL------------------------------------ 260
            +    ++  G +R   R  R+L+                                    
Sbjct: 181 PEFTWCNMQEGRHRMYLRLDRALVTQDWADHYKDVRVHHLVESVSDHCALLITDSIVLQS 240

Query: 261 ------RFEECWTKHEETKNLIQKAWS-SVSSYSAGDWAAKSALCIKECLAWN 270
                  FE  WT+ +E +++I+ AW+ SV+ YS     A    C  +   WN
Sbjct: 241 PRKRRFHFEAMWTRRDECRDIIRTAWNDSVNLYSPNGMVAGLKQCADDLSRWN 290

[Close]

BLAST of Lag0022111 vs. NCBI nr
Match: XP_030970961.1 (uncharacterized protein LOC115991405 [Quercus lobata])

HSP 1 Score: 176.4 bits (446), Expect = 3.3e-40
Identity = 106/293 (36.18%), Postives = 148/293 (50.51%), Query Frame = 0


Query: 21  MKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLKRELKFDNCLVVP 80
           M+ L WN RGLGNP++ R LR++V+  +P  +FL ETK   R   + K  + F N LV+P
Sbjct: 1   MRALGWNCRGLGNPQSVRVLRNIVQQWDPDFVFLSETKLRVRSMERKKMSIGFTNGLVIP 60

Query: 81  SDGSYGGLSLIWKSSIQVCVNSYSLGHIN-VTGKDSTDWWRFTSFYGNPSVEKRKDSWSL 140
           S G  GGL+L+W+  I V V S+S  HI+ +  +D    WR T FYGNP V +RK+SW L
Sbjct: 61  SHGRSGGLALLWRKEINVDVQSFSDRHIDAIVTEDRGFKWRITGFYGNPEVHRRKESWEL 120

Query: 141 LKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRDAVNYCRLLDPGFKD 200
           LK L       LPW+   GDFNE + + EK GG  R Q QMDDFR+A++ CR +D GF  
Sbjct: 121 LKVL--SRKFQLPWLCF-GDFNEIVSTSEKMGGARRSQRQMDDFREAIDCCRFMDLGFCG 180

Query: 201 NKPIVASLGCGGNRPIARKLRSLL------------------------------------ 260
            +    ++  G +R   R  R+L+                                    
Sbjct: 181 LEFTWCNMQEGRHRMYLRLDRALVTQDWADHYKDVRVHHLVESVSDHCALLITDSIVLQS 240

Query: 261 ------RFEECWTKHEETKNLIQKAWS-SVSSYSAGDWAAKSALCIKECLAWN 270
                  FE  WT+ +E +++I+ AW+ SV+ YS     A    C  +   WN
Sbjct: 241 PRKRRFHFEAMWTRRDECRDIIRTAWNDSVNLYSPNGMVAGLKQCADDLSRWN 290

[Close]

BLAST of Lag0022111 vs. ExPASy TrEMBL
Match: A0A6J1DUG8 (uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024135 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.7e-42
Identity = 108/267 (40.45%), Postives = 140/267 (52.43%), Query Frame = 0


Query: 21  MKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLKRELKFDNCLVVP 80
           MK LCWNV GLGNP  FR+LR++VR   P L+FL ETK +  +E + KREL FD C+ V 
Sbjct: 1   MKSLCWNVPGLGNPDTFRTLRNLVRRSQPQLVFLSETKGNPTLEGRAKRELSFDCCVSVA 60

Query: 81  SDGSYGGLSLIWKSSIQVCVNSYSLGHINVTGKDSTDWWRFTSFYGNPSVEKRKDSWSLL 140
           S G  GGL L+W S   V + S S GHI+    D    WRFT FYGNP   KR  SW LL
Sbjct: 61  STGKSGGLMLLWNSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFYGNPCTYKRSASWKLL 120

Query: 141 KRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQM---------DDF---RDAVN 200
           +RL  +   +LPW I+GGDFNE +   EK GG  R + QM         D F      +N
Sbjct: 121 ERLARM--MDLPW-IIGGDFNEIVSMTEKMGGVCRNESQMRGCPIWERLDRFLINESMLN 180

Query: 201 YC-----RLLDPGFKDNKPIVASLGCGGNRPIARKLRSLLRFEECWTKHEETKNLIQKAW 260
            C       L+    D++PI+AS      R      +  +RFEE W + +  +++I   W
Sbjct: 181 KCLNLKVTHLELLSSDHRPILASWDFELPRAWTCHKQRKIRFEESWLQIDGCRDIITGTW 240

Query: 261 SSVSSYSAGDWAAKSALCIKECLAWNK 271
            S+       + AK   C+     WNK
Sbjct: 241 GSLPGIGIEAFQAKICSCLSRLNEWNK 264

[Close]

BLAST of Lag0022111 vs. ExPASy TrEMBL
Match: A0A2N9HDH5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37541 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-40
Identity = 103/311 (33.12%), Postives = 154/311 (49.52%), Query Frame = 0


Query: 9   IGGGWLPAPPDAMKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLK 68
           +GGG   APP  M I+ WN RGLGN RA  +L ++V+S+ P ++FL+ETK D R    ++
Sbjct: 451 LGGGCATAPPHPMNIISWNCRGLGNHRAVLALHNLVKSQGPKILFLMETKLDVRKMEFIR 510

Query: 69  RELKFDNCLVVPSDGSYGGLSLIWKSSIQVCVNSYSLGHINV-TGKDSTDWWRFTSFYGN 128
            +L+F  C  VPS G  GGL+L+W   +Q+ + ++S+ HI+          WRFT FYGN
Sbjct: 511 VKLRFKFCFTVPSLGRSGGLALLWNDDVQLTIQNFSINHIDAQVCLQGALLWRFTGFYGN 570

Query: 129 PSVEKRKDSWSLLKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRDAV 188
           P   +R+ SW+LL +L  + S  LPW+++ GDFNE + S E+SG     Q  M +F + +
Sbjct: 571 PIAHRRRGSWALLDKLDSMMS--LPWLLM-GDFNEILSSDERSGEAAGSQRSMFEFGEVI 630

Query: 189 NYCRLLDPGFK----------------------------------------------DNK 248
           N+C L+D G++                                              D+ 
Sbjct: 631 NHCGLVDLGYRGFPFTWENGREAEAFVQKRLDRALASNSWMSLFPLCTIFHLQSSYSDHV 690

Query: 249 PIVASLGCGGNRPIARKLRSLLRFEECWTKHEETKNLIQKAWSSVSSYSAGDWAA--KSA 271
           PI+     G  R  A + R   +FEE W+ H E + +IQK W  V+   +  +    K  
Sbjct: 691 PILLHTDLG--RDQACRKRRPRKFEEKWSLHPECEKIIQKVWDQVNVEGSPMFVVCEKIK 750

[Close]

BLAST of Lag0022111 vs. ExPASy TrEMBL
Match: A0A2N9G1F9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21082 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-40
Identity = 98/281 (34.88%), Postives = 152/281 (54.09%), Query Frame = 0


Query: 16  APPDAMKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLKRELKFDN 75
           APP+ M +L WN +GLGNP A R+L H+V+ + P ++FL+ETK D      ++ +L FDN
Sbjct: 481 APPETMILLSWNCQGLGNPEAVRALHHMVKKKGPEVLFLMETKLDAGRMEVIRVKLGFDN 540

Query: 76  CLVVPSDGSYGGLSLIWKSSIQVCVNSYSLGHINV-TGKDSTDWWRFTSFYGNPSVEKRK 135
              VPS G  GGL+L+WK+  +V + +YS  HI+          WR T FYG P   +R+
Sbjct: 541 TFTVPSLGRSGGLALLWKADAEVVIQNYSQHHIDAHVDSKKAKCWRLTGFYGRPEQHRRR 600

Query: 136 DSWSLLKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRDAVNYCRLLD 195
           +SW+LLK L  +  D LPW  L GDFNE +  +EK GG +R   Q+ +F++AVN C  +D
Sbjct: 601 ESWALLKHLSSL--DVLPWCCL-GDFNEILTVNEKYGGRERSLRQILEFQEAVNICNFVD 660

Query: 196 PGFK-------DNKPIVASLGCGGNRPI---------------ARKLRSLLRFEECWTKH 255
            GF+       +N+   A++    +R +               +R  + + RFEE W  +
Sbjct: 661 LGFQGASYTWTNNRDASANIQGRLDRALGHGSLAGSFSQVLATSRIKKFVRRFEEKWATN 720

Query: 256 EETKNLIQKAWSSVSSYSAG--DWAAKSALCIKECLAWNKQ 272
            + + LIQ++W    S  +       K + C    + W+++
Sbjct: 721 PDCEKLIQESWRQPVSVGSPMFQLCQKISRCRMALIDWSRE 758

[Close]

BLAST of Lag0022111 vs. ExPASy TrEMBL
Match: A0A2N9HWG1 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43955 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.6e-40
Identity = 102/311 (32.80%), Postives = 154/311 (49.52%), Query Frame = 0


Query: 9   IGGGWLPAPPDAMKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLK 68
           +GGG   APP  M I+ WN RGLGN RA  +L ++V+S+ P ++FL+ETK D R    ++
Sbjct: 318 LGGGCAAAPPHPMNIISWNCRGLGNHRAVLALHNLVKSQGPKILFLMETKLDVRKMEFIR 377

Query: 69  RELKFDNCLVVPSDGSYGGLSLIWKSSIQVCVNSYSLGHINV-TGKDSTDWWRFTSFYGN 128
            +L+F  C  VPS G  GGL+L+W   +Q+ + ++S+ HI+          WRFT FYGN
Sbjct: 378 VKLRFKFCFTVPSLGRSGGLALLWNDDVQLTIQNFSINHIDAQVCLQGALLWRFTGFYGN 437

Query: 129 PSVEKRKDSWSLLKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRDAV 188
           P V +R++SW+LL +L  + S  LPW+++ GDFNE + S E++G     Q  M +F + +
Sbjct: 438 PIVHRRRESWALLDKLDSMMS--LPWLLM-GDFNEILSSDERTGESSGSQRSMFEFGEVI 497

Query: 189 NYCRLLDPGFK----------------------------------------------DNK 248
           N C L+D G++                                              D+ 
Sbjct: 498 NRCGLVDLGYRGFPFTWENGREAEAFIQKRLDRALASNSWMSLFPLCTIYHLQSSYSDHV 557

Query: 249 PIVASLGCGGNRPIARKLRSLLRFEECWTKHEETKNLIQKAWSSVSSYSAGDWAA--KSA 271
           PI+     G  R  A + R   +FEE W+ H E + +IQK W   +   +  +    K  
Sbjct: 558 PILLHTDLG--RDQACRKRRPRKFEEKWSLHPECEKIIQKVWDQENPVGSPMFVVCEKIK 617

[Close]

BLAST of Lag0022111 vs. ExPASy TrEMBL
Match: A0A2N9HLP3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40513 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 6.8e-39
Identity = 103/303 (33.99%), Postives = 145/303 (47.85%), Query Frame = 0


Query: 15  PAPPDAMKILCWNVRGLGNPRAFRSLRHVVRSENPLLIFLLETKSDCRIESKLKRELKFD 74
           PAPP AM  L WN RGLGNPR  + L  +V +++P ++FL+E   D     +L+ +L+FD
Sbjct: 366 PAPPRAMNCLAWNCRGLGNPRTVQELARLVCAQDPTVVFLIEAWQDEGPLERLRCKLQFD 425

Query: 75  NCLVVPSDGSYGGLSLIWKSSIQVCVNSYSLGHINVTGKDST-DWWRFTSFYGNPSVEKR 134
           N  V  S    GGL L+WKSSI + +NS+S  HI+    D+T + WRFT FYG P   KR
Sbjct: 426 NKFVADSQNKGGGLCLLWKSSINIQINSFSPSHIDAVVDDNTPNAWRFTGFYGAPETSKR 485

Query: 135 KDSWSLLKRLVDIGSDNLPWMILGGDFNEFIFSHEKSGGGDRRQGQMDDFRDAVNYCRLL 194
           ++SW+LL+RL       LPW  + GDFNE +   EK G   R + QM  FRD ++ C  +
Sbjct: 486 EESWALLRRL--NSQSTLPWCCM-GDFNELVRIKEKQGRHSRSERQMQLFRDVLDDCGFV 545

Query: 195 DPGF---------------------------------------------KDNKPIVASLG 254
           D GF                                              D+KP+  S  
Sbjct: 546 DLGFNGPKFTWTNNRLGDMTWERLDRAVATPEWLLRFPSARVYHLDVRWSDHKPLWVS-- 605

Query: 255 CGGNRPIARKLRSLLRFEECWTKHEETKNLIQKAW-SSVSSYSAGDWAAKSALCIKECLA 271
                P+  ++R   RFEE WT  +  +  +  AW  SV+         K   C ++  +
Sbjct: 606 ---TNPMKCQIRKPFRFEEVWTSDQGCEETVANAWKQSVNGVPMFSVWEKIHKCRRDLRS 660

The following BLAST results are available for this feature:

BLAST of Lag0022111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157437.1	3.6e-42	40.45	uncharacterized protein LOC111024135 [Momordica charantia]	[more]
XP_030929385.1	5.1e-41	36.18	uncharacterized protein LOC115955407 [Quercus lobata]	[more]
XP_030925054.1	1.5e-40	34.60	uncharacterized protein LOC115952115 [Quercus lobata]	[more]
XP_030958760.1	2.5e-40	36.18	uncharacterized protein LOC115980671 [Quercus lobata]	[more]
XP_030970961.1	3.3e-40	36.18	uncharacterized protein LOC115991405 [Quercus lobata]	[more]

BLAST of Lag0022111 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0022111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUG8	1.7e-42	40.45	uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A2N9HDH5	1.6e-40	33.12	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37541 PE=3 SV=1	[more]
A0A2N9G1F9	2.1e-40	34.88	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21082 PE=4 SV=1	[more]
A0A2N9HWG1	3.6e-40	32.80	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9HLP3	6.8e-39	33.99	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40513 PE=4 SV=1	[more]

BLAST of Lag0022111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 18..204 e-value: 4.4E-19 score: 71.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 15..195
None	No IPR available	PANTHER	PTHR22748:SF11	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE CHLOROPLASTIC	coord: 18..168
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 18..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0022111.1	Lag0022111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
molecular_function	GO:0004518	nuclease activity