Lag0022060 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022060
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr7: 17201378 .. 17202115 (-)
RNA-Seq ExpressionLag0022060
SyntenyLag0022060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTTTTGGGTGTGTCCATTTGTGAAATATCAGTGGCGTTGCTCCAAGTTCGAGTTCCTGTATCAGTCCTTAACTCCCATGAATTTTGAATCAATTTTGTGGGCTGTTAAGGAGAGGCTGGCTATGTTGGACTTCGAGCTTGTGGTAGTATTTTGGTGGGCAGTGTGGAACCTGCGTAATTCATTGGTCCGGGGAGGGAATGTGGTTGAAAAGGACTTAACGCAAAGGTCCTCTGATTATTTAGCCTCTTTTCAACGTGTTGTAGCGTTTCGAGGGGTGGTGTCTTCATGTATCTCCCTGTCTTCTTCTAATCGGCCGACCTGCACTTGGAAGCCGTCGTTAGAGCTAGATTTAAAACTGAATGTAGATGCCTCGGTTAACCTGGAAACTGGGAATGCAGGAGGAGGTTGCGTTCTGGGTAATGCTAGGGGTGAAGTCTTACTGGCAACATGTATTTTTCTTCCTCGATGTTGGTGTGTGGATGTGGCTGAAGATTGGGCTCTGCTCACTGGAGTCCAAATTGCACGTCAATCTGGGTTTTCGCAATTTCATGTGGAGACGAACTCTTTGAGGCTAGTCAAGATTTTAAATGGGGAGTCTGATGATGTCTCTGAGGTTGGCTTGCTCATGGATGAGGCTCGGGTTTTGCTGCTACAGGACCTCGTTATGCAAAGTCTCGTTCACGCCACGGTCTGGGAAAATGGCAACCCATATTATGGCTTCTCTAGCTTTTAG

mRNA sequence

ATGTTTTTTTGGGTGTGTCCATTTGTGAAATATCAGTGGCGTTGCTCCAAGTTCGAGTTCCTGTATCAGTCCTTAACTCCCATGAATTTTGAATCAATTTTGTGGGCTGTTAAGGAGAGGCTGGCTATGTTGGACTTCGAGCTTGTGGTAGTATTTTGGTGGGCAGTGTGGAACCTGCGTAATTCATTGGTCCGGGGAGGGAATGTGGTTGAAAAGGACTTAACGCAAAGGTCCTCTGATTATTTAGCCTCTTTTCAACGTGTTGTAGCGTTTCGAGGGGTGGTGTCTTCATGTATCTCCCTGTCTTCTTCTAATCGGCCGACCTGCACTTGGAAGCCGTCGTTAGAGCTAGATTTAAAACTGAATGTAGATGCCTCGGTTAACCTGGAAACTGGGAATGCAGGAGGAGGTTGCGTTCTGGGTAATGCTAGGGGTGAAGTCTTACTGGCAACATGTATTTTTCTTCCTCGATGTTGGTGTGTGGATGTGGCTGAAGATTGGGCTCTGCTCACTGGAGTCCAAATTGCACGTCAATCTGGGTTTTCGCAATTTCATGTGGAGACGAACTCTTTGAGGCTAGTCAAGATTTTAAATGGGGAGTCTGATGATGTCTCTGAGGTTGGCTTGCTCATGGATGAGGCTCGGGTTTTGCTGCTACAGGACCTCGTTATGCAAAGTCTCGTTCACGCCACGGTCTGGGAAAATGGCAACCCATATTATGGCTTCTCTAGCTTTTAG

Coding sequence (CDS)

ATGTTTTTTTGGGTGTGTCCATTTGTGAAATATCAGTGGCGTTGCTCCAAGTTCGAGTTCCTGTATCAGTCCTTAACTCCCATGAATTTTGAATCAATTTTGTGGGCTGTTAAGGAGAGGCTGGCTATGTTGGACTTCGAGCTTGTGGTAGTATTTTGGTGGGCAGTGTGGAACCTGCGTAATTCATTGGTCCGGGGAGGGAATGTGGTTGAAAAGGACTTAACGCAAAGGTCCTCTGATTATTTAGCCTCTTTTCAACGTGTTGTAGCGTTTCGAGGGGTGGTGTCTTCATGTATCTCCCTGTCTTCTTCTAATCGGCCGACCTGCACTTGGAAGCCGTCGTTAGAGCTAGATTTAAAACTGAATGTAGATGCCTCGGTTAACCTGGAAACTGGGAATGCAGGAGGAGGTTGCGTTCTGGGTAATGCTAGGGGTGAAGTCTTACTGGCAACATGTATTTTTCTTCCTCGATGTTGGTGTGTGGATGTGGCTGAAGATTGGGCTCTGCTCACTGGAGTCCAAATTGCACGTCAATCTGGGTTTTCGCAATTTCATGTGGAGACGAACTCTTTGAGGCTAGTCAAGATTTTAAATGGGGAGTCTGATGATGTCTCTGAGGTTGGCTTGCTCATGGATGAGGCTCGGGTTTTGCTGCTACAGGACCTCGTTATGCAAAGTCTCGTTCACGCCACGGTCTGGGAAAATGGCAACCCATATTATGGCTTCTCTAGCTTTTAG

Protein sequence

MFFWVCPFVKYQWRCSKFEFLYQSLTPMNFESILWAVKERLAMLDFELVVVFWWAVWNLRNSLVRGGNVVEKDLTQRSSDYLASFQRVVAFRGVVSSCISLSSSNRPTCTWKPSLELDLKLNVDASVNLETGNAGGGCVLGNARGEVLLATCIFLPRCWCVDVAEDWALLTGVQIARQSGFSQFHVETNSLRLVKILNGESDDVSEVGLLMDEARVLLLQDLVMQSLVHATVWENGNPYYGFSSF
Homology
BLAST of Lag0022060 vs. NCBI nr
Match: XP_030941688.1 (uncharacterized protein LOC115966628 [Quercus lobata])

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-15
Identity = 64/236 (27.12%), Postives = 110/236 (46.61%), Query Frame = 0

Query: 4    WVCPFVKYQWRCSKFEFLYQSLTPMNFESILWAVKE---RLAMLDFELVVVFWWAVWNLR 63
            W CP  +  W  S      Q  T   ++ +L    E   RL+  +FEL +   W +WN R
Sbjct: 920  WECPVAQDVWSGSLVRL--QKCT-QGYDDVLQLFGELLNRLSREEFELFLTLSWVIWNQR 979

Query: 64   NSLVRGGNVVEK-DLTQRSSDYLASFQRVVAFRGVVSSCISLSSSNRPTCTWKPSLELDL 123
            N+++ GG + +   L +R+  YL  +++           +S+ S  +    W+P      
Sbjct: 980  NAVIHGGKIKDPGQLCKRAEVYLLEYRQ-------AQDQLSIPSRQQSVTQWQPPPIDRY 1039

Query: 124  KLNVDASVNLETGNAGGGCVLGNARGEVLLATCIFLPRCWCVDVAEDWALLTGVQIARQS 183
            KLN DA++  E G +G G ++ N RGEV+ A  +  P  W  + AE  A    V+ A  +
Sbjct: 1040 KLNFDAAIFTELGCSGFGAIVRNERGEVMAALSVKGPLVWNSEEAEALACRRAVEFAIHA 1099

Query: 184  GFSQFHVETNSLRLVKILNGESDDVSEVGLLMDEARVLLLQDLVMQSLVHATVWEN 236
            GF++  +E +++ ++K +   S D S +G +  +          +Q LVH   W +
Sbjct: 1100 GFAELMIEGDNVNVMKAVCSNSMDKSRLGHVFQD----------IQCLVHGLRWSS 1135

BLAST of Lag0022060 vs. NCBI nr
Match: XP_023884925.1 (uncharacterized protein LOC111997106 [Quercus suber])

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-15
Identity = 55/182 (30.22%), Postives = 96/182 (52.75%), Query Frame = 0

Query: 39  ERLAMLDFELVVVFWWAVWNLRNSLVRGGNV-VEKDLTQRSSDYLASFQRVVAFRGVVSS 98
           ERL+  + EL     W VWN RN L+ GG + V   L +R+ +Y++ F+          S
Sbjct: 6   ERLSQDELELFWTQAWIVWNQRNCLLHGGQLKVPSSLNKRAEEYISEFKE-------AQS 65

Query: 99  CISLSSSNRPT-CTWKPSLELDLKLNVDASVNLETGNAGGGCVLGNARGEVLLATCIFLP 158
            + +  + +P   TW+P    + K+N DA++  E G  G G ++ N  GEV+ A     P
Sbjct: 66  RLGVQRAQQPAGDTWQPPPPGEFKMNFDAAMFSELGKTGYGAIIRNENGEVMAAMSASGP 125

Query: 159 RCWCVDVAEDWALLTGVQIARQSGFSQFHVETNSLRLVKILNGESDDVSEVGLLMDEARV 218
                D AE  A    ++ A  +GFS+  VE +++ +V+ ++   +++S +G+++D+ R 
Sbjct: 126 MVRTSDEAEFLACRRAIEFAVDAGFSRMIVEGDNINVVQAISSSVENISPIGIVVDDIRH 180

BLAST of Lag0022060 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-14
Identity = 67/214 (31.31%), Postives = 106/214 (49.53%), Query Frame = 0

Query: 13  WRCSKF-EFLYQSLTPMNFE--SILWAVKERLAMLDFELVVVFWWAVWNLRNSLVR---- 72
           W+CSKF  FL+    P+  +    +    + ++      +VV  WA+WN RN   +    
Sbjct: 5   WQCSKFSHFLHLLWVPVGSDMGHFMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSL 64

Query: 73  GGNVVEKDLTQRSSDYLASFQRVVAFRGVVSSCISLSSSNRP-TCTWKPSLELDLKLNVD 132
           GG++   DL   S +YL  +Q         SS  +L     P    W+P     LK+NVD
Sbjct: 65  GGSL--SDLVSWSENYLQVYQAAQR-----SSXSALVVCRPPRVAIWRPPAAPLLKVNVD 124

Query: 133 ASVNLETGNAGGGCVLGNARGEVLLATCIFLPRCWCVDVAEDWALLTGVQIARQSGFSQF 192
           A+   E+  AG G ++ ++ G V L     L R   VD  E +A+  G+ +A ++GF +F
Sbjct: 125 AAFRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRF 184

Query: 193 HVETNSLRLVKILNGESDDVSEVGLLMDEARVLL 219
            +ET+SLR+  +L  +  D SEVG+L    ++ L
Sbjct: 185 QIETDSLRIFNLLTTDCVDDSEVGVLCSVIKLFL 211

BLAST of Lag0022060 vs. NCBI nr
Match: XP_023904177.1 (uncharacterized protein LOC112015942 [Quercus suber])

HSP 1 Score: 89.7 bits (221), Expect = 3.7e-14
Identity = 58/216 (26.85%), Postives = 104/216 (48.15%), Query Frame = 0

Query: 4   WVCPFVKYQWRCSKFEFLYQSLTPMNFESILWAVKERLAMLDFELVVVFWWAVWNLRNSL 63
           W CP  +  W  S+ +     L   +   +   +  RL   D  L +V  W +W+ RNS+
Sbjct: 248 WECPVAQDVWAGSRIKLQKCPLGQPDMVQLFLYLLHRLEPEDMALFLVQAWMLWSQRNSV 307

Query: 64  VRGGNVVEKD-LTQRSSDYLASFQRVVAFRGVVSSCISLSSSNRPTCTWKPSLELDLKLN 123
           + GG + E   L +R  ++L  F +V     V+    ++ +       W+P      K+N
Sbjct: 308 LHGGKLKEPGWLNKRDVEWLEEFAQVQDQLDVLQPRATVGN------VWRPPAHPFFKMN 367

Query: 124 VDASVNLETGNAGGGCVLGNARGEVLLATCIFLPRCWCVDVAEDWALLTGVQIARQSGFS 183
            DA++  ++G +G G V+ N  GEV+ A     P     D AE  A    ++ A  +GF+
Sbjct: 368 FDAAIFNDSGRSGFGAVIRNELGEVMAALSAIGPSVSSSDEAETLACRKAMEFAVDAGFN 427

Query: 184 QFHVETNSLRLVKILNGESDDVSEVGLLMDEARVLL 219
           +  +E +S+ ++K L+  S D+S VG ++ + + L+
Sbjct: 428 ELIIEGDSINVIKALSSSSPDLSVVGNVVADIKCLI 457

BLAST of Lag0022060 vs. NCBI nr
Match: TXG68182.1 (hypothetical protein EZV62_003117 [Acer yangbiense])

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-12
Identity = 61/212 (28.77%), Postives = 113/212 (53.30%), Query Frame = 0

Query: 23  QSLTPMNFESILWAVK------ERLAMLDFELVVVFWWAVWNLRNSLVRGGNVVEKDLTQ 82
           QSL+ + F   LW +K        L   +  L+ +FWW +W LRN+   G   +  D   
Sbjct: 277 QSLS-LRFTLFLWILKLFRFCLSSLRDDELALLCIFWWRIWFLRNNNCHGKKGIGDDSLL 336

Query: 83  RSSDYLASFQRVVAFRGVVSSCIS-LSSSNRPTCTWKPSLELDLKLNVDASVNLETGNAG 142
               +  SF  +VAF      C++ +S++N     WKP +E  +K+N DA++++  G  G
Sbjct: 337 A---WCESF--LVAFWDANQVCLNGVSAANPSIVVWKPPVEGTIKINCDAALDMNRGVVG 396

Query: 143 GGCVLGNARGEVLLATCI-FLPRCWCVDVAEDWALLTGVQIARQSGFSQFHVETNSLRLV 202
            G V+ +  G V+LA+C+  +   +   +AE   +L G+ +A  S    F ++T++L +V
Sbjct: 397 FGLVVRDF-GGVVLASCVQHIQVNFSPLIAEAMTILRGINLAFDSNLIPFVIKTDALAVV 456

Query: 203 KILNGESDDVSEVGLLMDEARVLLLQDLVMQS 227
           K++  +S  ++++GL++ E  ++   D++ QS
Sbjct: 457 KLIEAKSPSLADIGLVIGE--IVSKLDMISQS 479

BLAST of Lag0022060 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-14
Identity = 67/214 (31.31%), Postives = 106/214 (49.53%), Query Frame = 0

Query: 13  WRCSKF-EFLYQSLTPMNFE--SILWAVKERLAMLDFELVVVFWWAVWNLRNSLVR---- 72
           W+CSKF  FL+    P+  +    +    + ++      +VV  WA+WN RN   +    
Sbjct: 5   WQCSKFSHFLHLLWVPVGSDMGHFMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSL 64

Query: 73  GGNVVEKDLTQRSSDYLASFQRVVAFRGVVSSCISLSSSNRP-TCTWKPSLELDLKLNVD 132
           GG++   DL   S +YL  +Q         SS  +L     P    W+P     LK+NVD
Sbjct: 65  GGSL--SDLVSWSENYLQVYQAAQR-----SSXSALVVCRPPRVAIWRPPAAPLLKVNVD 124

Query: 133 ASVNLETGNAGGGCVLGNARGEVLLATCIFLPRCWCVDVAEDWALLTGVQIARQSGFSQF 192
           A+   E+  AG G ++ ++ G V L     L R   VD  E +A+  G+ +A ++GF +F
Sbjct: 125 AAFRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRF 184

Query: 193 HVETNSLRLVKILNGESDDVSEVGLLMDEARVLL 219
            +ET+SLR+  +L  +  D SEVG+L    ++ L
Sbjct: 185 QIETDSLRIFNLLTTDCVDDSEVGVLCSVIKLFL 211

BLAST of Lag0022060 vs. ExPASy TrEMBL
Match: A0A803QHW9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-13
Identity = 61/211 (28.91%), Postives = 94/211 (44.55%), Query Frame = 0

Query: 4   WVCPFVKYQWRCSKFEFLYQSLTPMNFESILWAVKERLAMLDFELVVVFWWAVWNLRNSL 63
           + CP  K  W+ S F   ++    M+    ++ +    +  DFEL V   WA+W+ RN +
Sbjct: 286 FTCPHAKSTWKHSDFTMDFRKAQAMHDGDFIFHLSNVHSQPDFELNVCTMWAIWSHRNKV 345

Query: 64  VRGGNVVE-KDLTQRSSDYLASFQRVVAFRGVVSSCISLSSSNRPT--------CTWKPS 123
           + GG + E K  T  + DYL  +           +  S+S +   T         +W+P 
Sbjct: 346 LHGGVLKEGKITTSFAQDYLGKYHASTRQTHTAPAVTSVSPTGAHTSKKQASKDISWQPP 405

Query: 124 LELDLKLNVDASVNLETGNAGGGCVLGNARGEVLLATCIFLPRCWCVDVAEDWALLTGVQ 183
               LKLNVDA+VN  +   G G ++ +  G V+ A       C+  D  E  AL   + 
Sbjct: 406 TAAGLKLNVDAAVNATSQTLGVGAIVRDHNGLVVAAISKPAQGCFHSDEMEAKALFHSLN 465

Query: 184 IARQSGFSQFHVETNSLRLVKILNGESDDVS 206
            A Q      H+ET+SLR+   L   S D+S
Sbjct: 466 WALQQQLQITHIETDSLRVFNALIHTSIDLS 496

BLAST of Lag0022060 vs. ExPASy TrEMBL
Match: A0A5C7IHD9 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003117 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.7e-13
Identity = 61/212 (28.77%), Postives = 113/212 (53.30%), Query Frame = 0

Query: 23  QSLTPMNFESILWAVK------ERLAMLDFELVVVFWWAVWNLRNSLVRGGNVVEKDLTQ 82
           QSL+ + F   LW +K        L   +  L+ +FWW +W LRN+   G   +  D   
Sbjct: 277 QSLS-LRFTLFLWILKLFRFCLSSLRDDELALLCIFWWRIWFLRNNNCHGKKGIGDDSLL 336

Query: 83  RSSDYLASFQRVVAFRGVVSSCIS-LSSSNRPTCTWKPSLELDLKLNVDASVNLETGNAG 142
               +  SF  +VAF      C++ +S++N     WKP +E  +K+N DA++++  G  G
Sbjct: 337 A---WCESF--LVAFWDANQVCLNGVSAANPSIVVWKPPVEGTIKINCDAALDMNRGVVG 396

Query: 143 GGCVLGNARGEVLLATCI-FLPRCWCVDVAEDWALLTGVQIARQSGFSQFHVETNSLRLV 202
            G V+ +  G V+LA+C+  +   +   +AE   +L G+ +A  S    F ++T++L +V
Sbjct: 397 FGLVVRDF-GGVVLASCVQHIQVNFSPLIAEAMTILRGINLAFDSNLIPFVIKTDALAVV 456

Query: 203 KILNGESDDVSEVGLLMDEARVLLLQDLVMQS 227
           K++  +S  ++++GL++ E  ++   D++ QS
Sbjct: 457 KLIEAKSPSLADIGLVIGE--IVSKLDMISQS 479

BLAST of Lag0022060 vs. ExPASy TrEMBL
Match: A0A803Q185 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 55/222 (24.77%), Postives = 100/222 (45.05%), Query Frame = 0

Query: 4   WVCPFVKYQWRCSKFEFLYQSLTPMNFESILWAVKERLAMLDFELVVVFWWAVWNLRNSL 63
           W C   K  W+   F+   +     +  + L  +   ++   FE+ +V  W++WN RN+ 
Sbjct: 321 WECKKSKVCWKLCDFQLEIKRHGQEDELAFLMRLSTVMSKDQFEMFLVITWSLWNTRNAC 380

Query: 64  VRGGNVVE-KDLTQRSSDYLASFQRVVAFRGVVSSCISLSSSNRPTCTWKPSLELDLKLN 123
              G V +  ++ +     L  FQ                   R    WK     ++K+N
Sbjct: 381 THDGFVPQPAEMVEWCYKLLEDFQG--------GRSRPQEVMRREEGVWKVPRHGEVKIN 440

Query: 124 VDASVNLETGNAGGGCVLGNARGEVLLATCIFLPRCWCVDVAEDWALLTGVQIARQSGFS 183
           VDASV    G +G GCV+   +G+VL A+   + R +     E  A+L G+Q+  Q    
Sbjct: 441 VDASVKTGAGYSGLGCVIRGEQGDVLFASSTAIQREYSPLQLELMAILKGIQVGLQRHIR 500

Query: 184 QFHVETNSLRLVKILNGESDDVSEVGLLMDEARVLLLQDLVM 225
            F +E + L  +++++ + D   +V  L+++ R+LL  + V+
Sbjct: 501 HFSIELDCLEAIQLIHKKEDGCRDVDCLLEQIRLLLSHESVI 534

BLAST of Lag0022060 vs. ExPASy TrEMBL
Match: A0A6J1CDQ4 (uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010533 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-11
Identity = 59/196 (30.10%), Postives = 98/196 (50.00%), Query Frame = 0

Query: 32  SILWAVKERLAMLDFELVVVFWWAVWNLRNSLVRGGNVVE-KDLTQRSSDYLASFQRVVA 91
           +IL   ++ L   DFE +VVF W++WN RN+ V     VE  DL    S Y+A+F+    
Sbjct: 3   NILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNT 62

Query: 92  FRGVVSSCISLSSSN-------RPTCTWKPSLELDLKLNVDASVNLETGNAG-GGCVLGN 151
                +  +S S          +    W P+ E   KL  DAS +    NAG G  ++ +
Sbjct: 63  NHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRD 122

Query: 152 ARGEVLLATCIFLPRCWCVDVAEDWALLTGVQIARQSGFSQFHVETNSLRLVKILNGESD 211
            RG+VL +   +L     VD AE  A + G+++A ++G S   +ET+SLR+  +   + +
Sbjct: 123 HRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKE 182

Query: 212 DVSEVGLLMDEARVLL 219
            +S+ G +++  +  L
Sbjct: 183 GLSKTGSIIEYVKTHL 198

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030941688.13.3e-1527.12uncharacterized protein LOC115966628 [Quercus lobata][more]
XP_023884925.15.7e-1530.22uncharacterized protein LOC111997106 [Quercus suber][more]
XP_022150944.12.2e-1431.31uncharacterized protein LOC111018973 [Momordica charantia][more]
XP_023904177.13.7e-1426.85uncharacterized protein LOC112015942 [Quercus suber][more]
TXG68182.11.2e-1228.77hypothetical protein EZV62_003117 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DBJ71.0e-1431.31uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A803QHW94.4e-1328.91Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A5C7IHD95.7e-1328.77RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_003117 ... [more]
A0A803Q1851.1e-1124.77Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1CDQ41.4e-1130.10uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 118..237
e-value: 2.7E-6
score: 29.5
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 122..219
e-value: 1.1E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR47074BNAC02G40300D PROTEINcoord: 49..217
NoneNo IPR availablePANTHERPTHR47074:SF3OS07G0513450 PROTEINcoord: 49..217
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 121..221
e-value: 6.25675E-12
score: 58.8648
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 119..199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022060.1Lag0022060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity