Lag0022042 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022042
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr7: 16831695 .. 16832683 (-)
RNA-Seq ExpressionLag0022042
SyntenyLag0022042
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTGCAGGTGGACTCTGTTGTCCAAGACCGTGGAAAACGCTCGCACATTCTGGAGGATATGGCCACCAACAGCTATCAGTGGCCATCTGAGCGGTCTACACCAAAAAGATTGCTGCTGGAGTGTTTGAGGTTGATAAAGTAAGTGCATCCAGGCCAGATGATTCCCTTGCTAATGCTTTTATGAAATTTCAGGTACAGTGAGTGCACAGTCAATTGAATCAGCTGCTGCTTTAGCATCCAGACCTCAGGAGGAGACCATCGAACAGGTTCAGTATGTATCAAATTCTAATTTTAGGGATATAATAATAATGTTACACCTACACATTATCACCTAACATAGGAATCATGAAATTTCTCTTATGCAATACTAAGAATGTTCTTAATCCTCCTGGTTTTCCCTCAAACTCAAGAAAATTAAAGTTAGAAGATCTTGTTGGAGCTTTCATTGCAGAGTCAAGTAACAGGACAACCAAATTAGAGGAGGCAGTCATTGCATCAACACCACAGTGAATGGCCACAGTGCAGCCATAAAGAACATTGAGACTCAGCTGGGACAGTTGGTAAGTGTTGTAAGCACTATGAATAAAGGTAAGGCCCAGCTGAGCAGGAGAAAACCAGATGGAATACTGTAAGGCAATCACTGTGCACCAGAAGGAAGCTAAGAGGAGCCTGAATCTGAGGACTATGAAATGCTACAGGGAAGCTGAGGAGGATACATCAGCAGATGAGGCTAAAAACCTAACCTTGAGCTCCTATTCCTTCTCCACACTGATGGTTCTAAGGAAAAGAAAAAGAAAAAGAAGAAAAAGAACAATCAGGTTCAGTTTGATAAATTTATGAATGCTTTTATGAATCTGAACATTAATATTCTTTTGCAGAGGCATTAGAGATGCACAGTACAACAGGTTCATGAAGGAGTGGTTTGAAGGATTGGAATTTCCAATTCCGTTACAGCGGAAGCAATTGGACCGATTCGCAATTTAA

mRNA sequence

ATGCAGCTGCAGGTGGACTCTGTTGTCCAAGACCGTGGAAAACGCTCGCACATTCTGGAGGATATGGCCACCAACAGCTATCAGTGGCCATCTGAGCGGTCTACACCAAAAAGATTGCTGCTGGAGTGTACAGTGAGTGCACAGTCAATTGAATCAGCTGCTGCTTTAGCATCCAGACCTCAGGAGGAGACCATCGAACAGGACAACCAAATTAGAGGAGGCAGTCATTGCATCAACACCACAGTGAATGGCCACAGTGCAGCCATAAAGAACATTGAGACTCAGCTGGGACAGTTGGTAAGTGTTGTAAGCACTATGAATAAAGGTAAGGCCCAGCTGAGCAGGAGAAAACCAGATGGAATACTGGAAGCTGAGGAGGATACATCAGCAGATGAGGCTAAAAACCTAACCTTGAGCTCCTATTCCTTCTCCACACTGATGGTTCTAAGGAAAAGAAAAAGAAAAAGAAGAAAAAGAACAATCAGAGGCATTAGAGATGCACAGTACAACAGGTTCATGAAGGAGTGGTTTGAAGGATTGGAATTTCCAATTCCGTTACAGCGGAAGCAATTGGACCGATTCGCAATTTAA

Coding sequence (CDS)

ATGCAGCTGCAGGTGGACTCTGTTGTCCAAGACCGTGGAAAACGCTCGCACATTCTGGAGGATATGGCCACCAACAGCTATCAGTGGCCATCTGAGCGGTCTACACCAAAAAGATTGCTGCTGGAGTGTACAGTGAGTGCACAGTCAATTGAATCAGCTGCTGCTTTAGCATCCAGACCTCAGGAGGAGACCATCGAACAGGACAACCAAATTAGAGGAGGCAGTCATTGCATCAACACCACAGTGAATGGCCACAGTGCAGCCATAAAGAACATTGAGACTCAGCTGGGACAGTTGGTAAGTGTTGTAAGCACTATGAATAAAGGTAAGGCCCAGCTGAGCAGGAGAAAACCAGATGGAATACTGGAAGCTGAGGAGGATACATCAGCAGATGAGGCTAAAAACCTAACCTTGAGCTCCTATTCCTTCTCCACACTGATGGTTCTAAGGAAAAGAAAAAGAAAAAGAAGAAAAAGAACAATCAGAGGCATTAGAGATGCACAGTACAACAGGTTCATGAAGGAGTGGTTTGAAGGATTGGAATTTCCAATTCCGTTACAGCGGAAGCAATTGGACCGATTCGCAATTTAA

Protein sequence

MQLQVDSVVQDRGKRSHILEDMATNSYQWPSERSTPKRLLLECTVSAQSIESAAALASRPQEETIEQDNQIRGGSHCINTTVNGHSAAIKNIETQLGQLVSVVSTMNKGKAQLSRRKPDGILEAEEDTSADEAKNLTLSSYSFSTLMVLRKRKRKRRKRTIRGIRDAQYNRFMKEWFEGLEFPIPLQRKQLDRFAI
Homology
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BLAST of Lag0022042 vs. NCBI nr
Match: XP_024025398.1 (uncharacterized protein LOC112092750 [Morus notabilis])

HSP 1 Score: 55.8 bits (133), Expect = 4.7e-04
Identity = 40/123 (32.52%), Postives = 62/123 (50.41%), Query Frame = 0 

Query: 18  ILEDMATNSYQWPSERSTPKRL---------------------LLECTVSAQ---SIESA 77
           +LEDMATN+YQWPSERS PK++                     L E ++ +Q   +I S+
Sbjct: 220 LLEDMATNNYQWPSERSIPKKIAGLHEVEAITNLTAQIASLSKLTEYSIDSQCHPNILSS 279

Query: 78  AALASRPQEETIEQDNQIR--GGSHC-----INTTVNGHSAAIKNIETQLGQLVSVVSTM 110
              ++ PQEE +  ++ I     SH        T     SA I+++E Q+GQL S+++  
Sbjct: 280 PEQSNPPQEERVNLEDAIAQLATSHMQFMNETRTNFQNQSAQIRSLEVQIGQLASMLNDR 339

The following BLAST results are available for this feature:
BLAST of Lag0022042 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_024025398.14.7e-0432.52uncharacterized protein LOC112092750 [Morus notabilis][more]
BLAST of Lag0022042 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0022042 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022042.1Lag0022042.1mRNA