Lag0022024 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022024
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionEG45-like domain containing protein
Locationchr7: 16073685 .. 16076687 (+)
RNA-Seq ExpressionLag0022024
SyntenyLag0022024
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCATGCAGTAGACGTCGCAAAAGCTTACGACTACACGACAACAGTGATGGATGCAGCAACGAAAATCATACGCGTAAGTAAAAGTTTCACTGACAGTTTTTGGCTTTCAACGACTTGTTTGGCATGCCACATGAAAGTGATTTTTCTTGTAGTGCGGTTCTCTTTTCGGTTGTTGAATGGTGTTTTATTGTAACCTGTAATTTGTTGTGACTATGAAAAAAGGGCTTAAAAAGCCCGTAAAAAGGAAAATTTCTCCCTTGATAGGGGTTAGAAAACAAATAGAAATTGGAGAAAAGAACCAAATTGTTATAAAATTGAAAGTATAAGGACTAAATCATCACAAATTATAATATAGAGACTAAGGGTGTGTTTGGTTTAACTTTTCAAGAGTTTAATTTTTTTAAAAAAAATCATTTTGAAAAAAATTCTAGCGTTTGACAACCACTAAAAATGACTTATTAAAAATGAGATTGAGAAATAAATCATTTTAAGAGAAACACTTAAAACCAAATTTTTTAAAAATAGTTTTTAAGTATATAATAACTTATGTATAAAAACATTTATGAGGAAATACAACCAAACATATGAGTGTTTAAATTCAAAACACTTTTTATACAAAATATTCAAAAGAAATCGTATTCTTGAAAAACACTTAAATTAAAAGCTATTCCAAACGGTCTCTACACCGTCTAATTTGAGCCAAAAGTGTTTTCTTAACCAATAAGTTTTCTCAATTTCTTAGTCCCTGTAGTTGAGGAAAAATTATTAGTTGTTCCCGGTGCAATGAGACCCTCTTTCTAAAACCGTCGAAGGTAAATCTTCAAATTTGTCTGTCCCTAATAATCGTTGGATACAAAATCGAGGTACTTTTGATATTTCTCTCTCCTTACATCCAACAGTGCAAAACTACGAATCTCATTGCACCGAGAGCACCTAAAAATTTCTTATGTTCGAGAGGATTCAAGCATAATTAGCTGACTAGACTTTCCGTAAACCCATTTTAATGTTGAATTTCAAACTAATTAATAACCACGTTTTCTTCAGTCTCCTTGATGTACGTCACACTAATTTAAAATTCTGACAGCGTGTTAGAATAAAACTTGCAATATGTGTTATGTTGAATAAGTCAAACTTGACTAGACTTGATTGTGGCTTCAATTACAATTTTGGTGGCTATAAATTGAAGAGCTGATATTGGGTTTAACTCCATAAGCAAATAGTTATACGTTGAAATATCAGATGGAAGCAGTAATGAAGTTTGTGGTGGTGGTGGTGAGTTTGGTGTTGACACTTTCTTATGTTCATGCAGACACTGGCACTGCAACTTTTTATACGCCCCCTTATGTTCGTGAGTACATAAACATAAACTCTCTTTCTCGATATCTAGGTTTATTCAAATCGTTTCTAGGTTTAACCAAATCGTTTGATATTGTGATATATTAAGGGTGTGTTTGGTTTAACTTTTGTTTAATTTTGAAAAAAATTTGTAGTGTTTGGCAACCACTAAAAATGAAATCTTAAAAAATGAGATTGAGAAATAAATCATTTTGAGAGAAACACTTGAAACCAACTTTTTTTTTTTTAAGAGTTTGTAAGTATACAATAACTTGTGTAAACATTTACGAGGAAATGTAACCAAACATATGAGTGTTTAAATTTTAAACAATTTTTATTCCAAATGTTTTTTAAAGAATGTATTCTTGAAAAACATTTAAATTAAAATGTATTCCAAACGGACTCTAATATAAGTGGCCATTTAGGGACAAGAAAACTATTCTAGTGCCACTGGAGTATGACCATATTTTTTAATCGAGACTCCGTAGCATACTTACAAATTTCGCTTTAGAGACAAAGTGCCATAAAGGAAATTGCTCTTCTTTTTCTTGGTTATAAATTTAAAAAAAAAAAAAAATTGTAGGATGTGTTAAAGTTTTCTCTAGAGTTTGTCTCTCCCTAAAATTTTCATAATCAAATGATTATGTGTCTAAAAAAAGTTAGAAAAAGCAAAAAGTTTTTGCGTCTTCTTATGAAAATTCGAAGCTAGACCCTGATGGCTATTAATATTTTTTGTTGTTAAATCATTGATAACAAAAATGGTTGAATTATACAAAATAGTTTAGGAAAGATTTTAATTGAGCCCCTAAATTTTGAAAATGTTTAATTTAAAACCCTAAATTTTGAAATTGTTCAAAAATAAGCATTTAAAGAGTTTTATTCCATCAAAAGGACAAATGAAAATTGACGTGGTAGCTATAATGTTAAAAAATTAATTAGAAGATTAAGATTAAAAATTAGCATTATTTCAACTTTACAAAATTATTGACAATATCAATATTTACCCATTAGTTGTCTTGCGAATTTCCATCCAATTACTGAATAAAAAACAAAAAATCCATCCAATTACTTAAATAGAGAATTTTTCCAAAATTTGAGTTTTTTTAAACAATTTACTTTTTCAAAGTCTATCTAGAAGCATAATTAAAACCTACCTCAGAAATCCAAATAAGGTATTGTGTATGATTTAACCAAACAAAAACCTTATATCATATACTTCATCACGGATCCCCGTCTCATTTGTAGGTAAGAAATGACGTTACACAAATTAAATTAAAACACGCAGAAGAGTTTCGACGATAATATCATATTAAATCATTACTAGATCCGAAAATTTAATCGGACGCATGCATTTAACAAGGGCCTATCGAAATATACAGCTTCTGCATGCTTTGGTTTCGAAGAGCAAGGGACTATGATAGCAGCAGCCAGCGATGGAATATATAACAATGGCGCAGCCTGTGGGAGAATGTATAGGGTGACATGCACTGGGCGAACAAACTTAGGTGTTCTAGAGCCATGCACAGGCAACAGCGTCACTGTCAAGGTCGTTGATCGCTGCCCATCTCCTGGTTGCCAAGCCACCATTGATCTCTCTCAGGAAGCTTTTGTCATGATTGCCAACCCCGACGCTGGAAAAATCAACATCGACTTTACTCAGTAA

mRNA sequence

ATGACGCATGCAGTAGACGTCGCAAAAGCTTACGACTACACGACAACAGTGATGGATGCAGCAACGAAAATCATACGCATGGAAGCAGTAATGAAGTTTGTGGTGGTGGTGGTGAGTTTGGTGTTGACACTTTCTTATGTTCATGCAGACACTGGCACTGCAACTTTTTATACGCCCCCTTATGTTCCTTCTGCATGCTTTGGTTTCGAAGAGCAAGGGACTATGATAGCAGCAGCCAGCGATGGAATATATAACAATGGCGCAGCCTGTGGGAGAATGTATAGGGTGACATGCACTGGGCGAACAAACTTAGGTGTTCTAGAGCCATGCACAGGCAACAGCGTCACTGTCAAGGTCGTTGATCGCTGCCCATCTCCTGGTTGCCAAGCCACCATTGATCTCTCTCAGGAAGCTTTTGTCATGATTGCCAACCCCGACGCTGGAAAAATCAACATCGACTTTACTCAGTAA

Coding sequence (CDS)

ATGACGCATGCAGTAGACGTCGCAAAAGCTTACGACTACACGACAACAGTGATGGATGCAGCAACGAAAATCATACGCATGGAAGCAGTAATGAAGTTTGTGGTGGTGGTGGTGAGTTTGGTGTTGACACTTTCTTATGTTCATGCAGACACTGGCACTGCAACTTTTTATACGCCCCCTTATGTTCCTTCTGCATGCTTTGGTTTCGAAGAGCAAGGGACTATGATAGCAGCAGCCAGCGATGGAATATATAACAATGGCGCAGCCTGTGGGAGAATGTATAGGGTGACATGCACTGGGCGAACAAACTTAGGTGTTCTAGAGCCATGCACAGGCAACAGCGTCACTGTCAAGGTCGTTGATCGCTGCCCATCTCCTGGTTGCCAAGCCACCATTGATCTCTCTCAGGAAGCTTTTGTCATGATTGCCAACCCCGACGCTGGAAAAATCAACATCGACTTTACTCAGTAA

Protein sequence

MTHAVDVAKAYDYTTTVMDAATKIIRMEAVMKFVVVVVSLVLTLSYVHADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYNNGAACGRMYRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANPDAGKINIDFTQ
Homology
[Close]
BLAST of Lag0022024 vs. NCBI nr
Match: XP_031740680.1 (EG45-like domain containing protein [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-57
Identity = 112/130 (86.15%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 27  MEAVMKFVVVVVSLVLTLSYVHADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYNN 86
           MEA+MK VVVVVSL L LSY HA+TGTAT+YTPPYVPSAC+GFE+QGTMIAAASDG+YNN
Sbjct: 1   MEALMKVVVVVVSLALALSYAHAETGTATYYTPPYVPSACYGFEDQGTMIAAASDGLYNN 60

Query: 87  GAACGRMYRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANPD 146
           G ACGRMY VTCTG TNLGV +PCTGNSVTVKVVDRCPSPGCQ TIDLSQEAF MIANPD
Sbjct: 61  GEACGRMYTVTCTGPTNLGVQQPCTGNSVTVKVVDRCPSPGCQGTIDLSQEAFSMIANPD 120

Query: 147 AGKINIDFTQ 157
           AGK+NIDFTQ
Sbjct: 121 AGKVNIDFTQ 130

[Close]
BLAST of Lag0022024 vs. NCBI nr
Match: KAE8649073.1 (hypothetical protein Csa_015240 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-57
Identity = 112/130 (86.15%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 27  MEAVMKFVVVVVSLVLTLSYVHADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYNN 86
           MEA+MK VVVVVSL L LSY HA+TGTAT+YTPPYVPSAC+GFE+QGTMIAAASDG+YNN
Sbjct: 1   MEALMKVVVVVVSLALALSYAHAETGTATYYTPPYVPSACYGFEDQGTMIAAASDGLYNN 60

Query: 87  GAACGRMYRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANPD 146
           G ACGRMY VTCTG TNLGV +PCTGNSVTVKVVDRCPSPGCQ TIDLSQEAF MIANPD
Sbjct: 61  GEACGRMYTVTCTGPTNLGVQQPCTGNSVTVKVVDRCPSPGCQGTIDLSQEAFSMIANPD 120

Query: 147 AGKINIDFTQ 157
           AGK+NIDFTQ
Sbjct: 121 AGKVNIDFTQ 130

[Close]
BLAST of Lag0022024 vs. NCBI nr
Match: KAA0044495.1 (EG45-like domain containing protein [Cucumis melo var. makuwa] >TYK29623.1 EG45-like domain containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.8e-57
Identity = 112/130 (86.15%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 27  MEAVMKFVVVVVSLVLTLSYVHADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYNN 86
           MEA+MK VVVVVSL L LSY HA++GTATFYTPPYVPSAC+GFEEQGTMIAAA DG+YNN
Sbjct: 1   MEALMKVVVVVVSLALALSYAHAESGTATFYTPPYVPSACYGFEEQGTMIAAAGDGLYNN 60

Query: 87  GAACGRMYRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANPD 146
           G ACGRMY VTCTGRTNLGV +PCTGNSVTVKVVDRCPSPGCQATIDLSQEAF +IANPD
Sbjct: 61  GEACGRMYTVTCTGRTNLGVEQPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFSIIANPD 120

Query: 147 AGKINIDFTQ 157
           AGK+ IDFTQ
Sbjct: 121 AGKVIIDFTQ 130

[Close]
BLAST of Lag0022024 vs. NCBI nr
Match: XP_038876066.1 (EG45-like domain containing protein [Benincasa hispida])

HSP 1 Score: 231.9 bits (590), Expect = 3.8e-57
Identity = 111/127 (87.40%), Postives = 121/127 (95.28%), Query Frame = 0 

Query: 30  VMKFVVVVVSLVLTLSYVHADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYNNGAA 89
           +MKF+VVVVSLVLTLSYVHA+TGTATFYTPPYVPSACFGF+++GTMIAAASDGIYNNG  
Sbjct: 1   MMKFMVVVVSLVLTLSYVHAETGTATFYTPPYVPSACFGFDDEGTMIAAASDGIYNNGEV 60

Query: 90  CGRMYRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANPDAGK 149
           CGRMY VTCTG TNLGV +PCTGNSVTVKVVDRCPSPGCQATIDLSQEAF +IA+PDAGK
Sbjct: 61  CGRMYSVTCTGPTNLGVPQPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFAIIADPDAGK 120

Query: 150 INIDFTQ 157
           INI+FTQ
Sbjct: 121 INIEFTQ 127

[Close]
BLAST of Lag0022024 vs. NCBI nr
Match: XP_008454153.1 (PREDICTED: EG45-like domain containing protein [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 3.8e-57
Identity = 112/130 (86.15%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 27  MEAVMKFVVVVVSLVLTLSYVHADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYNN 86
           MEA+MK VVVVVSL L LSY HA++GTATFYTPPYVPSAC+GFEEQGTMIAAA DG+YNN
Sbjct: 1   MEALMKVVVVVVSLALALSYAHAESGTATFYTPPYVPSACYGFEEQGTMIAAAGDGLYNN 60

Query: 87  GAACGRMYRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANPD 146
           G ACGRMY VTCTGRTNLGV +PCTGNSVTVKVVDRCPSPGCQATIDLSQEAF +IANPD
Sbjct: 61  GEACGRMYTVTCTGRTNLGVEQPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFSIIANPD 120

Query: 147 AGKINIDFTQ 157
           AGK+ IDFTQ
Sbjct: 121 AGKVIIDFTQ 130

[Close]
BLAST of Lag0022024 vs. ExPASy Swiss-Prot
Match: Q9ZP41 (EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-37
Identity = 77/123 (62.60%), Postives = 90/123 (73.17%), Query Frame = 0 

Query: 34  VVVVVSLVLTLSYVHADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYNNGAACGRM 93
           V+  +++ L  S  +A  GTATFYTPPYVPSAC G++  G MIAAAS  I+NNGA C + 
Sbjct: 9   VITTMAICLISSAAYASEGTATFYTPPYVPSACNGYKNDGVMIAAASYAIWNNGAVCNKS 68

Query: 94  YRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANPDAGKINID 153
           +RV CTG TN G   PC G SV VK+VD CP+ GCQATIDLSQEAF  IANPDAGKI I+
Sbjct: 69  FRVKCTGATNQGTPHPCRGGSVLVKIVDLCPA-GCQATIDLSQEAFSQIANPDAGKIKIE 128

Query: 154 FTQ 157
           F Q
Sbjct: 129 FNQ 130

[Close]
BLAST of Lag0022024 vs. ExPASy Swiss-Prot
Match: Q9M0C2 (Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=EGC1 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-25
Identity = 63/115 (54.78%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 40  LVLTLSYVHADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYNNGAACGRMYRVTCT 99
           LV   S+ +A  G ATFYT  Y P  C+   ++G MIAAASD +++NG  CG+M+ V C+
Sbjct: 12  LVFLFSFSYATPGIATFYT-SYTP--CYRGTQEGVMIAAASDTLWDNGRVCGKMFTVKCS 71

Query: 100 GRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANPDAGKINIDF 155
           G  N  V  PCTG SV VK+VD CPS GC +T+DLS+EAF  IANP AG INID+
Sbjct: 72  GPRN-AVPHPCTGKSVKVKIVDHCPS-GCASTLDLSREAFAQIANPVAGIINIDY 121

[Close]
BLAST of Lag0022024 vs. ExPASy Swiss-Prot
Match: Q9ZV52 (EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 0 

Query: 27  MEAVMKFVVVVVSLVLTLSYV-HADTGTATFYTPPYVPSACFGFEEQGTMIAAASDGIYN 86
           ++  +KFVVV++     L+ +  A  G A +Y PPY  SAC+G + + T++    + ++ 
Sbjct: 2   IKMAVKFVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYGTQRE-TLVVGVKNNLWQ 61

Query: 87  NGAACGRMYRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFVMIANP 146
           NG ACGR YRV C G T       CTG +V VKVVD C  P C   ++LS++AF +IAN 
Sbjct: 62  NGRACGRRYRVRCIGAT-YNFDRACTGRTVDVKVVDFCREP-CNGDLNLSRDAFRVIANT 121

Query: 147 DAGKINIDFT 156
           DAG I + +T
Sbjct: 122 DAGNIRVVYT 128

[Close]
BLAST of Lag0022024 vs. ExPASy Swiss-Prot
Match: Q6H677 (Putative expansin-B14 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB14 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.4e-07
Identity = 33/93 (35.48%), Postives = 46/93 (49.46%), Query Frame = 0 

Query: 74  TMIAAASDGIYNNGAACGRMYRVTCTGRTNLGVLEPCTGNSVTVKVVDRCPSPGC---QA 133
           +MIAA S  IY +G  CG  Y+V C+G  +      C+G  VTV + D CP   C     
Sbjct: 72  SMIAAGSPSIYESGKGCGSCYQVKCSGNPS------CSGKPVTVVLTDLCPGGACLEEPV 131

Query: 134 TIDLSQEAFVMIANP-------DAGKINIDFTQ 157
             DLS  AF  +A P       +AGK+ + + +
Sbjct: 132 HFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYAR 158

The following BLAST results are available for this feature:
BLAST of Lag0022024 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031740680.11.0e-5786.15EG45-like domain containing protein [Cucumis sativus][more]
KAE8649073.11.0e-5786.15hypothetical protein Csa_015240 [Cucumis sativus][more]
KAA0044495.13.8e-5786.15EG45-like domain containing protein [Cucumis melo var. makuwa] >TYK29623.1 EG45-... [more]
XP_038876066.13.8e-5787.40EG45-like domain containing protein [Benincasa hispida][more]
XP_008454153.13.8e-5786.15PREDICTED: EG45-like domain containing protein [Cucumis melo][more]
BLAST of Lag0022024 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZP413.5e-3762.60EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 ... [more]
Q9M0C21.4e-2554.78Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana OX=3702 G... [more]
Q9ZV521.5e-1941.54EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE... [more]
Q6H6776.4e-0735.48Putative expansin-B14 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB14 PE=3 SV... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 76..154
e-value: 0.0024
score: 24.1
IPR007112Expansin/pollen allergen, DPBB domainPROSITEPS50842EXPANSIN_EG45coord: 52..156
score: 13.217292
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 42..156
e-value: 2.6E-24
score: 87.8
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 37..156
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 77..153
e-value: 2.8E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR47295:SF10EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2coord: 28..156
IPR044206EG45-like domain containing protein, plantPANTHERPTHR47295EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATEDcoord: 28..156

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022024.1Lag0022024.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009627 systemic acquired resistance
cellular_component GO:0048046 apoplast