Homology
BLAST of Lag0021948 vs. NCBI nr
Match:
XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia])
HSP 1 Score: 270.8 bits (691), Expect = 1.6e-68
Identity = 154/377 (40.85%), Postives = 220/377 (58.36%), Query Frame = 0
Query: 10 NSEIEISSQSPKIINPGNKITTMKLDEDNFLLWKLQILTTLRGHGLKHHLDEDAEVPSKY 69
NS+ Q+ K INPG+K++ ++L++DN LLWK QI T L+G+GL+ ++D + + P+++
Sbjct: 9 NSDAARIIQASKTINPGSKVSIVRLNDDNXLLWKFQIRTALQGNGLESYIDSNEDTPAQF 68
Query: 70 L-----TSADSSKIPNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQN 129
+ S+ SS NPAY W++QD LI AWLLGSM+ +LS+MLDC++ RE+W +L+
Sbjct: 69 VQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLGSMNEDILSQMLDCKSAREIWTVLEC 128
Query: 130 RFSSRNVARIMDLQSKLESLKKGNLKLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKG 189
F+SR +AR+M L+ KLE+ KKGNL L+DYFL+++NLVD L AG+K+S EDH+++IL G
Sbjct: 129 MFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKNLVDSLAIAGKKLSTEDHIMHILAG 188
Query: 190 LGTKYDSTVNVITEKDETPPLQKTVS----SDSNNHRN---------------------- 249
LG ++D+ ++VIT ++ LQ+ S + N RN
Sbjct: 189 LGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRNERNLINSDGSLPSVNLTLNDSSKKN 248
Query: 250 ----------------SNGKGNN----NRRSWNNNNKPQCQLCRRFGHTVQRCYYRFERW 309
G+G N NRR+W NNKPQCQ+C RFGHT RCY RFER
Sbjct: 249 NLHQSKCFNPHQSNYSQRGRGTNNRSSNRRNWTGNNKPQCQICGRFGHTALRCYMRFERN 308
Query: 310 FQGPNGN------------------SNNQQVSPGLGQQSSGSNN-QQAAMNAFVVQNDLN 317
F GPN N S+N SP + N+ + M A +V D N
Sbjct: 309 FLGPNMNPNTFSPAGFSSGFPLNTPSHNAFSSPATQNGNFSMNSASPSQMQALMVAQDFN 368
BLAST of Lag0021948 vs. NCBI nr
Match:
KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 240.4 bits (612), Expect = 2.3e-59
Identity = 141/376 (37.50%), Postives = 207/376 (55.05%), Query Frame = 0
Query: 1 MESPSIEKSNSEIEISSQSPKIINPGNKITTMKLDEDNFLLWKLQILTTLRGHGLKHHLD 60
M S S E SS +I GNKI+ +KL++D FLLWK QILT L + L++ L+
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60
Query: 61 EDAEVPSKYLTSADSSK-----IPNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETT 120
++E PSKYL S +SS PNPAY W RQD LI +WLLGSMS +L++ML C++
Sbjct: 61 SESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSA 120
Query: 121 REVWKILQNRFSSRNVARIMDLQSKLESLKKGNLKLEDYFLRVRNLVDLLNAAGRKISHE 180
+E+W+ LQ FSSR +A+ M ++KL ++KKG++ L++YFL++ VD L + + +S +
Sbjct: 121 KEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSD 180
Query: 181 DHVLYILKGLGTKYDSTVNVITEKDETPPLQKTVS------------------------- 240
DH+LYIL GLG+ Y S ++VI+ + ++P +Q+ +S
Sbjct: 181 DHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIV 240
Query: 241 ---------------------SDSNNHRNSNGKGNNNRRSWNNNNKPQCQLCRRFGHTVQ 300
+ S N R G G +NR N NKPQCQ+C + G++
Sbjct: 241 TQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSAD 300
Query: 301 RCYYRFERWFQGPNGNSNNQQVSPGLGQQSSGSNNQQAAMNAFVVQNDLNKDNHWYPDSG 322
RC++R+ SN+ SP S + N M+A V DLN D++WYPDSG
Sbjct: 301 RCFFRY-------TPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSG 360
BLAST of Lag0021948 vs. NCBI nr
Match:
TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 240.4 bits (612), Expect = 2.3e-59
Identity = 141/376 (37.50%), Postives = 207/376 (55.05%), Query Frame = 0
Query: 1 MESPSIEKSNSEIEISSQSPKIINPGNKITTMKLDEDNFLLWKLQILTTLRGHGLKHHLD 60
M S S E SS +I GNKI+ +KL++D FLLWK QILT L + L++ L+
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60
Query: 61 EDAEVPSKYLTSADSSK-----IPNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETT 120
++E PSKYL S +SS PNPAY W RQD LI +WLLGSMS +L++ML C++
Sbjct: 61 SESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSA 120
Query: 121 REVWKILQNRFSSRNVARIMDLQSKLESLKKGNLKLEDYFLRVRNLVDLLNAAGRKISHE 180
+E+W+ LQ FSSR +A+ M ++KL ++KKG++ L++YFL++ VD L + + +S +
Sbjct: 121 KEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSD 180
Query: 181 DHVLYILKGLGTKYDSTVNVITEKDETPPLQKTVS------------------------- 240
DH+LYIL GLG+ Y S ++VI+ + ++P +Q+ +S
Sbjct: 181 DHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIV 240
Query: 241 ---------------------SDSNNHRNSNGKGNNNRRSWNNNNKPQCQLCRRFGHTVQ 300
+ S N R G G +NR N NKPQCQ+C + G++
Sbjct: 241 TQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSAD 300
Query: 301 RCYYRFERWFQGPNGNSNNQQVSPGLGQQSSGSNNQQAAMNAFVVQNDLNKDNHWYPDSG 322
RC++R+ SN+ SP S + N M+A V DLN D++WYPDSG
Sbjct: 301 RCFFRY-------TPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSG 360
BLAST of Lag0021948 vs. NCBI nr
Match:
XP_022136882.1 (dr1-associated corepressor homolog isoform X1 [Momordica charantia])
HSP 1 Score: 212.6 bits (540), Expect = 5.1e-51
Identity = 124/289 (42.91%), Postives = 171/289 (59.17%), Query Frame = 0
Query: 87 VRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQNRFSSRNVARIMDLQSKLESLKK 146
++QD LI +WL SM +L EM+ C T REVW+IL+N ++SRN+AR+M L+SKLE++KK
Sbjct: 1 MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 60
Query: 147 GNLKLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKGLGTKYDSTVNVITEKDETPPLQ 206
GNL L+DYF +V+ LVD L AAG+K++ EDH+++IL GL ++++STV+VI+ + +T LQ
Sbjct: 61 GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 120
Query: 207 KTVS-----------------------------SDSN-------------NHRNSNGKGN 266
+ S +SN N+R+ N
Sbjct: 121 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 180
Query: 267 NNRRSWNNNNKPQCQLCRRFGHTVQRCYYRFERWFQGPNGNSNNQQVSPGLGQQSSGSN- 317
N RR+WN+NN+PQCQ+ +FGHT RCY RFE+ F GPNG S+ Q G S SN
Sbjct: 181 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 240
BLAST of Lag0021948 vs. NCBI nr
Match:
XP_022136883.1 (dr1-associated corepressor homolog isoform X2 [Momordica charantia])
HSP 1 Score: 212.6 bits (540), Expect = 5.1e-51
Identity = 124/289 (42.91%), Postives = 171/289 (59.17%), Query Frame = 0
Query: 87 VRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQNRFSSRNVARIMDLQSKLESLKK 146
++QD LI +WL SM +L EM+ C T REVW+IL+N ++SRN+AR+M L+SKLE++KK
Sbjct: 1 MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 60
Query: 147 GNLKLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKGLGTKYDSTVNVITEKDETPPLQ 206
GNL L+DYF +V+ LVD L AAG+K++ EDH+++IL GL ++++STV+VI+ + +T LQ
Sbjct: 61 GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 120
Query: 207 KTVS-----------------------------SDSN-------------NHRNSNGKGN 266
+ S +SN N+R+ N
Sbjct: 121 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 180
Query: 267 NNRRSWNNNNKPQCQLCRRFGHTVQRCYYRFERWFQGPNGNSNNQQVSPGLGQQSSGSN- 317
N RR+WN+NN+PQCQ+ +FGHT RCY RFE+ F GPNG S+ Q G S SN
Sbjct: 181 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 240
BLAST of Lag0021948 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 6.9e-19
Identity = 84/353 (23.80%), Postives = 146/353 (41.36%), Query Frame = 0
Query: 14 EISSQSPKIINPGNKITTMKLDEDNFLLWKLQILTTLRGHGLKHHLDEDAEVPSKYLTSA 73
E+ + I+N N KL N+L+W Q+ G+ L LD +P +
Sbjct: 7 ELVLNNTSILNV-NMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATI-GT 66
Query: 74 DSSKIPNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQNRFSSRNVAR 133
D++ NP Y W RQD LI + +LG++S S+ + T ++W+ L+ +++ +
Sbjct: 67 DAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGH 126
Query: 134 IMDLQSKLESLKKGNLKLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKGLGTKYDSTV 193
+ L+++L+ KG ++DY + D L G+ + H++ V +L+ L +Y +
Sbjct: 127 VTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVI 186
Query: 194 NVITEKDETPPL--------------------------------QKTVSSDSNNHRNSNG 253
+ I KD P L + T ++++NN+ N N
Sbjct: 187 DQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNN 246
Query: 254 K-----GNNNRRSW----------NNNNKP---QCQLCRRFGHTVQRCYYRFERWFQGPN 313
+ NNN + W NN +KP +CQ+C GH+ +RC
Sbjct: 247 RYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC------------ 306
Query: 314 GNSNNQQVSPGLGQQSSGSNNQQAAMNAFVVQNDLNKDNHWYPDSGASNHVTN 317
S Q + Q S A + N+W DSGA++H+T+
Sbjct: 307 --SQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITS 343
BLAST of Lag0021948 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 86/360 (23.89%), Postives = 140/360 (38.89%), Query Frame = 0
Query: 14 EISSQSPKIINPGNKITTMKLDEDNFLLWKLQILTTLRGHGLKHHLDEDAEVPSKYLTSA 73
EI + I+N N KL N+L+W Q+ G+ L LD +P +
Sbjct: 7 EIVLVNTNILNV-NMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI-GT 66
Query: 74 DSSKIPNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQNRFSSRNVAR 133
D+ NP Y W RQD LI + +LG++S S+ + T ++W+ L+ +++ +
Sbjct: 67 DAVPRVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGH 126
Query: 134 IMDLQSKLESLKKGNLKLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKGLGTKYDSTV 193
+ LR D L G+ + H++ V +L+ L Y +
Sbjct: 127 VTQ-------------------LRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVI 186
Query: 194 NVITEKDETPPL----QKTVSSDS-----------------------NNHRNSNGKGNNN 253
+ I KD P L ++ ++ +S N +RN N +G+N
Sbjct: 187 DQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDN- 246
Query: 254 RRSWNNNN--------------------KP---QCQLCRRFGHTVQRCYYRFERWFQGPN 313
R++NNNN KP +CQ+C GH+ +RC
Sbjct: 247 -RNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRC------------ 306
Query: 314 GNSNNQQVSPGLGQQSSGSNNQQAAM-------NAFVVQNDLNKDNHWYPDSGASNHVTN 317
P L Q S +N QQ+ A + N N+W DSGA++H+T+
Sbjct: 307 ---------PQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITS 322
BLAST of Lag0021948 vs. ExPASy TrEMBL
Match:
A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1)
HSP 1 Score: 270.8 bits (691), Expect = 7.6e-69
Identity = 154/377 (40.85%), Postives = 220/377 (58.36%), Query Frame = 0
Query: 10 NSEIEISSQSPKIINPGNKITTMKLDEDNFLLWKLQILTTLRGHGLKHHLDEDAEVPSKY 69
NS+ Q+ K INPG+K++ ++L++DN LLWK QI T L+G+GL+ ++D + + P+++
Sbjct: 9 NSDAARIIQASKTINPGSKVSIVRLNDDNXLLWKFQIRTALQGNGLESYIDSNEDTPAQF 68
Query: 70 L-----TSADSSKIPNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQN 129
+ S+ SS NPAY W++QD LI AWLLGSM+ +LS+MLDC++ RE+W +L+
Sbjct: 69 VQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLGSMNEDILSQMLDCKSAREIWTVLEC 128
Query: 130 RFSSRNVARIMDLQSKLESLKKGNLKLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKG 189
F+SR +AR+M L+ KLE+ KKGNL L+DYFL+++NLVD L AG+K+S EDH+++IL G
Sbjct: 129 MFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKNLVDSLAIAGKKLSTEDHIMHILAG 188
Query: 190 LGTKYDSTVNVITEKDETPPLQKTVS----SDSNNHRN---------------------- 249
LG ++D+ ++VIT ++ LQ+ S + N RN
Sbjct: 189 LGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRNERNLINSDGSLPSVNLTLNDSSKKN 248
Query: 250 ----------------SNGKGNN----NRRSWNNNNKPQCQLCRRFGHTVQRCYYRFERW 309
G+G N NRR+W NNKPQCQ+C RFGHT RCY RFER
Sbjct: 249 NLHQSKCFNPHQSNYSQRGRGTNNRSSNRRNWTGNNKPQCQICGRFGHTALRCYMRFERN 308
Query: 310 FQGPNGN------------------SNNQQVSPGLGQQSSGSNN-QQAAMNAFVVQNDLN 317
F GPN N S+N SP + N+ + M A +V D N
Sbjct: 309 FLGPNMNPNTFSPAGFSSGFPLNTPSHNAFSSPATQNGNFSMNSASPSQMQALMVAQDFN 368
BLAST of Lag0021948 vs. ExPASy TrEMBL
Match:
A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 141/376 (37.50%), Postives = 207/376 (55.05%), Query Frame = 0
Query: 1 MESPSIEKSNSEIEISSQSPKIINPGNKITTMKLDEDNFLLWKLQILTTLRGHGLKHHLD 60
M S S E SS +I GNKI+ +KL++D FLLWK QILT L + L++ L+
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60
Query: 61 EDAEVPSKYLTSADSSK-----IPNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETT 120
++E PSKYL S +SS PNPAY W RQD LI +WLLGSMS +L++ML C++
Sbjct: 61 SESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSA 120
Query: 121 REVWKILQNRFSSRNVARIMDLQSKLESLKKGNLKLEDYFLRVRNLVDLLNAAGRKISHE 180
+E+W+ LQ FSSR +A+ M ++KL ++KKG++ L++YFL++ VD L + + +S +
Sbjct: 121 KEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSD 180
Query: 181 DHVLYILKGLGTKYDSTVNVITEKDETPPLQKTVS------------------------- 240
DH+LYIL GLG+ Y S ++VI+ + ++P +Q+ +S
Sbjct: 181 DHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIV 240
Query: 241 ---------------------SDSNNHRNSNGKGNNNRRSWNNNNKPQCQLCRRFGHTVQ 300
+ S N R G G +NR N NKPQCQ+C + G++
Sbjct: 241 TQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSAD 300
Query: 301 RCYYRFERWFQGPNGNSNNQQVSPGLGQQSSGSNNQQAAMNAFVVQNDLNKDNHWYPDSG 322
RC++R+ SN+ SP S + N M+A V DLN D++WYPDSG
Sbjct: 301 RCFFRY-------TPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSG 360
BLAST of Lag0021948 vs. ExPASy TrEMBL
Match:
A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 141/376 (37.50%), Postives = 207/376 (55.05%), Query Frame = 0
Query: 1 MESPSIEKSNSEIEISSQSPKIINPGNKITTMKLDEDNFLLWKLQILTTLRGHGLKHHLD 60
M S S E SS +I GNKI+ +KL++D FLLWK QILT L + L++ L+
Sbjct: 1 MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60
Query: 61 EDAEVPSKYLTSADSSK-----IPNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETT 120
++E PSKYL S +SS PNPAY W RQD LI +WLLGSMS +L++ML C++
Sbjct: 61 SESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEEILNQMLHCKSA 120
Query: 121 REVWKILQNRFSSRNVARIMDLQSKLESLKKGNLKLEDYFLRVRNLVDLLNAAGRKISHE 180
+E+W+ LQ FSSR +A+ M ++KL ++KKG++ L++YFL++ VD L + + +S +
Sbjct: 121 KEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDALASINKPVSSD 180
Query: 181 DHVLYILKGLGTKYDSTVNVITEKDETPPLQKTVS------------------------- 240
DH+LYIL GLG+ Y S ++VI+ + ++P +Q+ +S
Sbjct: 181 DHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNESKLISETALPSVNIV 240
Query: 241 ---------------------SDSNNHRNSNGKGNNNRRSWNNNNKPQCQLCRRFGHTVQ 300
+ S N R G G +NR N NKPQCQ+C + G++
Sbjct: 241 TQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNRNKPQCQICAKLGYSAD 300
Query: 301 RCYYRFERWFQGPNGNSNNQQVSPGLGQQSSGSNNQQAAMNAFVVQNDLNKDNHWYPDSG 322
RC++R+ SN+ SP S + N M+A V DLN D++WYPDSG
Sbjct: 301 RCFFRY-------TPRSNSSGYSPNSHNTSYTNMNNHPQMSAMVAALDLNIDSNWYPDSG 360
BLAST of Lag0021948 vs. ExPASy TrEMBL
Match:
A0A6J1C8R2 (dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 2.5e-51
Identity = 124/289 (42.91%), Postives = 171/289 (59.17%), Query Frame = 0
Query: 87 VRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQNRFSSRNVARIMDLQSKLESLKK 146
++QD LI +WL SM +L EM+ C T REVW+IL+N ++SRN+AR+M L+SKLE++KK
Sbjct: 1 MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 60
Query: 147 GNLKLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKGLGTKYDSTVNVITEKDETPPLQ 206
GNL L+DYF +V+ LVD L AAG+K++ EDH+++IL GL ++++STV+VI+ + +T LQ
Sbjct: 61 GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 120
Query: 207 KTVS-----------------------------SDSN-------------NHRNSNGKGN 266
+ S +SN N+R+ N
Sbjct: 121 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 180
Query: 267 NNRRSWNNNNKPQCQLCRRFGHTVQRCYYRFERWFQGPNGNSNNQQVSPGLGQQSSGSN- 317
N RR+WN+NN+PQCQ+ +FGHT RCY RFE+ F GPNG S+ Q G S SN
Sbjct: 181 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 240
BLAST of Lag0021948 vs. ExPASy TrEMBL
Match:
A0A6J1C6N9 (dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 2.5e-51
Identity = 124/289 (42.91%), Postives = 171/289 (59.17%), Query Frame = 0
Query: 87 VRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQNRFSSRNVARIMDLQSKLESLKK 146
++QD LI +WL SM +L EM+ C T REVW+IL+N ++SRN+AR+M L+SKLE++KK
Sbjct: 1 MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 60
Query: 147 GNLKLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKGLGTKYDSTVNVITEKDETPPLQ 206
GNL L+DYF +V+ LVD L AAG+K++ EDH+++IL GL ++++STV+VI+ + +T LQ
Sbjct: 61 GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 120
Query: 207 KTVS-----------------------------SDSN-------------NHRNSNGKGN 266
+ S +SN N+R+ N
Sbjct: 121 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 180
Query: 267 NNRRSWNNNNKPQCQLCRRFGHTVQRCYYRFERWFQGPNGNSNNQQVSPGLGQQSSGSN- 317
N RR+WN+NN+PQCQ+ +FGHT RCY RFE+ F GPNG S+ Q G S SN
Sbjct: 181 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 240
BLAST of Lag0021948 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 74.7 bits (182), Expect = 1.5e-13
Identity = 41/174 (23.56%), Postives = 86/174 (49.43%), Query Frame = 0
Query: 32 MKLDEDNFLLWKLQILTTLRGHGLKHHLDEDAEVPSKYLTSADSSKIPNPAYD-HWVRQD 91
+ ++E N+ W+ LT + H+ D + +P A D +W ++D
Sbjct: 24 LDIEESNYDAWRELFLTHCLSFDVMGHI--------------DGTLLPTNANDVNWQKRD 83
Query: 92 SLIIAWLLGSMS-NSLLSEMLDCETTREVWKILQNRFSSRNVARIMDLQSKLESLKKGNL 151
++ L G+++ + T+R++W ++N+F + AR + L S+L + G++
Sbjct: 84 GIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDM 143
Query: 152 KLEDYFLRVRNLVDLLNAAGRKISHEDHVLYILKGLGTKYDSTVNVITEKDETP 204
++ DY+ +++ L D L ++ + V+Y+L GL K+D+ +NVI + P
Sbjct: 144 RVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFP 183
BLAST of Lag0021948 vs. TAIR 10
Match:
AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 63.5 bits (153), Expect = 3.5e-10
Identity = 36/137 (26.28%), Postives = 70/137 (51.09%), Query Frame = 0
Query: 20 PKIINPGN-KITTMKLDEDNFLLWKLQILTTLRGHGLKHHLDEDAEVPSKYLTSADSSKI 79
P I +P + I + DEDN++ WK++ + LR +D P +
Sbjct: 22 PDIHHPSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPF--------- 81
Query: 80 PNPAYDHWVRQDSLIIAWLLGSMSNSLLSEMLDCETTREVWKILQNRFSSRNVARIMDLQ 139
+P Y W + +++++ WL+ SM++ LL ++ ET ++W+ L+ F +I L+
Sbjct: 82 -SPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLR 141
Query: 140 SKLESLKKGNLKLEDYF 156
+L +L++G +E+YF
Sbjct: 142 RRLATLRQGGDSVEEYF 148
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022154487.1 | 1.6e-68 | 40.85 | uncharacterized protein LOC111021757 [Momordica charantia] | [more] |
KAA0048297.1 | 2.3e-59 | 37.50 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK10642.1 | 2.3e-59 | 37.50 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
XP_022136882.1 | 5.1e-51 | 42.91 | dr1-associated corepressor homolog isoform X1 [Momordica charantia] | [more] |
XP_022136883.1 | 5.1e-51 | 42.91 | dr1-associated corepressor homolog isoform X2 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 6.9e-19 | 23.80 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.1e-13 | 23.89 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DLT9 | 7.6e-69 | 40.85 | uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
A0A5A7U233 | 1.1e-59 | 37.50 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3CH97 | 1.1e-59 | 37.50 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A6J1C8R2 | 2.5e-51 | 42.91 | dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=... | [more] |
A0A6J1C6N9 | 2.5e-51 | 42.91 | dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=... | [more] |
Match Name | E-value | Identity | Description | |
AT1G34070.1 | 1.5e-13 | 23.56 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
AT1G21280.1 | 3.5e-10 | 26.28 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... | [more] |