Lag0021916 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021916
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionzf-RVT domain-containing protein
Locationchr7: 13819458 .. 13823799 (+)
RNA-Seq ExpressionLag0021916
SyntenyLag0021916
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTCCACCGGTAATGTCTCTCTCTCTCTTGTTTTCGTCTCTCTCTAACCCGTCTCCCTCTCATTCTCTCGGCTCTCTCTCTCTCTCTCTTCCTCGCAGCTCTCTCTCTCCGTCTGCAACCTATCGATCGCGCCGCTGCTGCTCGATCCGTGCGCTGCTGCGTTGCCGCTCGCCGACGATCCGTGCGCCGCCGCCTCCCCGATTTCAGATCTGCACGCTGCCGCCATCTCGCCGCCGTGAACCGCCGCTATTCGTCGTCTCCTGAAGCGTCGTTGCAGCCACGAGCAGCCACTGCCACCCCCGATTTCGTCTGTCGATTCAAATCTGTTCGACGCCTTCAGCTAGTGGGTAAGGAGTTTGTAAGTGTGGTTTAAGGGGGTTTTGGTCGATTTAATGTTTAATTAAGGATACCCACTGATTTTAGCTTTCGATTTCAAGGTGTCTGTGGCGTTGGAGGCCGAATTGTCGAATTGGAGCGAAGTTGGAAATTGGACAGCGAGCAGTAGTTTCATTTGGGTGAGTTTTCGGCCCTCTCAAGTCTTATGCTTTAGGAAATTGTTGAGTTTGGTGTGTCGTGGTGTGTGAATATATATTTATATATATTTTATGTGTTCATAGGCGAATATTTCGCATCACGTGGTTGGTGTTGTATCGAGTGGTTGGGTGATTTTTGATCAAGCGTAGTATCTCAAAGTAAGTAGCCCTTTTGGAATAAATTCTGTGTTTTAAAACTCATTTAAGCTGGGTATGAATTATAATAGCATGAGTTGGTTTTAATCCCTGAGTTGCCTTAGCCTGAAATGTTTATGCATTGAGATGATTGTTTGCTCCTAGCATGTATATTAAATATTTGGATTGAGGTTAAGGTGTTATGTATACGGTTGCCTTCAGGAATATGGATGTTGTGTGCTTGTGCTATGTAATGGTGAAAGTGTTGGACTGTTGTACAATGTGTGTTGTCTGGTATTGTTAGTGGACGACGGGGAGTTGTGTTTTATCTCTGTTTAGGAGTGTTGTTGCCGCCTTCGTTTCTTGTTCTTGAGTTTGTTGGAGTCGTGATGGTGCGTAACAGTTTAGCTTGTCGGTATTCTCTGCAAGGAAAAGAATTTGGTTAACGGGGTTGCAGTTGAATGTAGTAGTGTTAAGGGGTCCTACTGGGTAAAGGATTAAGAAAAGGGAGAAAGAATAGGCTAGTTGCCTTGACTGAGGGCCATGTCAATTAAACACCTAGGACTGAGATGTAATAGACTGAAATGAGGGGCTTAATGGGCGGGTCTTGGCTTCGCAGTCTAGGTGTCATTTACTAACTGTGGAAGTTAATTCCTGACTTAAACCCATGAACGCCCCACCAGTGAAATGGTAGTTTAAAGCGCTACGCGCCTATTAGTGCCTTGAGGGATGAGACTTAGCTTCACTGACTGGGTGCCATCTACCATCAGTAGGAGTAGAGACCTCCCAAAACTCCCACCTGTGCCTATCAGTGAGTTGGCAAACTTATATATTTATAGGTGTACTAATTGAACACGAGACCCGAACTGCAGATAAATGAAATGAAATGAAATAAATGAGAATGAGATGACCTAACCCTTAGGCCCTTAACTCGAATAAAATGTTAAAACCTTGATTGCTACTTACTGAGTATTTTCTTAAATACTCATTCTTTTCCCTTACATACAACTGCAGGTAGAGGTAAAGGTGTACAGTACGCGTGACGGGAGCTGCTGAGCCATGGATCTCCTTTAGGATAGTTTTTCGCATTTTTTTTACATTTTGAAATTCTCCTTTGAAACTTGTATTGAACGATTTACGATTTATTTCGCTTTAAGTTTTGTTTGATTTACTAAAGGTTTCGTTTGTTCTGTTTTAAACTGGGATCCTAGATCGAAAAGTTTCGCAAATTTCTAAGTATGATTTCTTTAAATGATAATTTCTCGCTGTTCTTAGAAGTAGAATGAAATGCATGTAGTAACGGCCTCAGGATCTAGGCATGAAAAGTAGGGTCGTTACATTTATTTTAGTTCTTGTATTATTTTGTTGCCTAATATTTTATATGTTCAATGATTCAACCAATCGTCATTGTTTGACTTCAATTGTGCACATCAATAACGAAATAAAAAATAGTTATATTTTTTGAAGTTCAAGTACTAGTATAAAACTTTAAAATTAGATCCACTATTTCAAAAAATTTCTAACAAGTCTTGAATTTTTGACATGGACACACATGTTATACACCAAATTGTAATTAGCTAAAGACATTTTTTTTTTTTGAGAAGAATTAGCTAAAGAGATACTTATTGAAGTGCATAATGACATGATAATCATAATTACAAAGTCTTCTTTAATAACTATTTGGTTTTTTAAAGTTGTGTTTGTTTTATGGGCAAATTGCAAAAACCACTCTTGAAATATGGTGATGGTAGCAATTACACCCCTAAACTTTCAAATGTTAAAAATAAACCCTCAAACTTTTAAAAGTGTAAAAATTAGACCCACAAACTTTTAAAAGTAAAAATTAAACCCTCAAACTATCATAAATAAAAAAATTAGGACCATTTTATTTTTTATTTTTTTAAAAAAAAAACCATTTTAATCAAATTCTATGTGATATTCCCTCTTTTCTCTCTCTACTCACCCCTCCCTTCAGTGGAATGGGTTAATTTGATGTTGTTTTAGGTCAATTAATGTGTTCTTGTTAAGAGATTCCTTCTTCTCTGCCGGAAGGTCGAATAGAGCGGCGGACTCAGACTCGGCGGAAAGAGCGAGTTGAGAGGAGATTTTATGATCGGTGAGTTGGAAGAAGCCGAGGTCAATAGCGACGGAGAGAAGGCGATCGAGAAAGTCGCAATTGGGAGAGTCTGAGAAGGATGGTGTCACTGTCTTAGGGAGGGAGACAGAAAAAAACCCACACAAAACTTTGAAAACATTTGCCTTTTGAGTTTTGACATCTATACCATCTCATCTTTGGTTTTTCTATTGCTATGGATTCCTCGATTGCTCGAACAGATCCATCTTCGGATGTATTCTTAAGTTTTAGAATGAAATTAACCCATTCGACCAAATGGGTGAATGAATCTAAGAGGGGTGAGTAGACAGAGAAAATAGAGAGAGAAGGAGAAATATCACAGATAAATTCATTAAAATGGTTTTTTTAATATATATATATATATAATGGTCCTAATTTTTATATTTATGATTTGAGGGTTTAATTTTTACTTTTAGAAGTTTGTGGGTCTAATTTTTACACTTTTGAAAGTTTGAGGGTTTATTTTTAACATTTGAAAGTTTAGGGGTGTAATTGTTACAATCACCATAATTCAGGGGTGGTTTTTGCAATTTGCCCATTTTATTATAATTTCCTACCATAGTTTTAATCTCGCTGAAGAAACATTTGAATTCTTAGCTAAATTCCAAAAACAAAATTAAGTTTCTATCAAAAAAAAAAAAAAAAAGCGACATTTGTAATCATTTAAACCCCATTTGATAACGATTTGATTTTTGAAAATTATAATTGTTTTCTCTCAATCTTCTTACTGCAGATGAGAAGGATAAATGGATATGACATTGTAGCTCATGTGGGACTTATTCGATTAAGAGCGAATATAAAATCGCTTTGAGTTTATTGATGGGCCAAGTGTCTTCAAGCATGAACACTCAGAGGAGATGGTGGGAGCATTATGGAAAGCGAAGTTACTGTCCAAAGTTAAGTTATTTATTTGGAAAGTGTATCACCCGTGCTAACCGAAAAACTGGTGCCTTTGGAAAAGAGGTGTTGATGTATTTCCTATGTACAAAATGTGTTTAAAACATATGGAAACTTGTAGATCATGCATTATGTGGGTACAAACGAGCACAAATGATATGTAATAATATATTTAGTTAGACGAATGCCAAGATTAGGAACGTGAATAATTTTCTTGATCGCTTAATCTGGCTAGTGGCTCAGTTACATCAGACGGAGTTCGAGAAGGCATGTATAGCTTTCTGGGCTATATGGAATGATAGGAATGAGTTTCATAAGGAAACGCCTCTTATGGAGTGGACGCTTCGGTGTGATTGGATTCAGGGATATTGGGAGGAAACTAGAACCAAGCAGCTAAGGGAGAAACGTTGTATTACGAATGTTGCGAGGAATCATGTGAGTCAACAAATGACATTTAAATTGTTTACAGATGTGGCCGTTCCACATCACACAGAAGGATTTGAATTGGGAGCGATGATTCTTGGATCGAATGGTGAACTAAAAGGAGCAATGGAAATGATTGATCTGATATTTTACATGCCTTTGTCTGTAGAGATACAAGTCATTATGCAAGGGATTCGTCTATTAAAGCGAATGTAA

mRNA sequence

ATGCCGTCCACCGCTCTCTCTCTCCGTCTGCAACCTATCGATCGCGCCGCTGCTGCTCGATCCGTGCGCTGCTGCGTTGCCGCTCGCCGACGATCCGTGCGCCGCCGCCTCCCCGATTTCAGATCTGCACGCTGCCGCCATCTCGCCGCCGTGAACCGCCGCTATTCGTCGTCTCCTGAAGCGTCGTTGCAGCCACGAGCAGCCACTGCCACCCCCGATTTCGTCTGTCGATTCAAATCTGTTCGACGCCTTCAGCTAGTGGCTTTCGATTTCAAGGTGTCTGTGGCGTTGGAGGCCGAATTGTCGAATTGGAGCGAAGTTGGAAATTGGACAGCGAGCAGTAGTTTCATTTGGTGTTGGACTGTTGTACAATGTGTGTTGTCTGGTATTGTTAGTGGACGACGGGGAGTTGTGTTTTATCTCTGTTTAGGAGTGTTGTTGCCGCCTTCGTTTCTTGTTCTTGAGTTTGTTGGAGTCGTGATGGTGCGTAACAGTTTAGCTTGTCGTAGGAGTAGAGACCTCCCAAAACTCCCACCTGTGCCTATCAAGATTCCTTCTTCTCTGCCGGAAGGTCGAATAGAGCGGCGGACTCAGACTCGGCGGAAAGAGCGAGTTGAGAGGAGATTTTATGATCGCTCATGTGGGACTTATTCGATTAAGAGCGAATATAAAATCGCTTTGAGTTTATTGATGGGCCAAGTGTCTTCAAGCATGAACACTCAGAGGAGATGGTGGGAGCATTATGGAAAGCGAAGTTACTGTCCAAAGTTAAGTTATTTATTTGGAAAGTGTATCACCCGTGCTAACCGAAAAACTGGTGCCTTTGGAAAAGAGACGAATGCCAAGATTAGGAACGTGAATAATTTTCTTGATCGCTTAATCTGGCTAGTGGCTCAGTTACATCAGACGGAGTTCGAGAAGGCATGTATAGCTTTCTGGGCTATATGGAATGATAGGAATGAGTTTCATAAGGAAACGCCTCTTATGGAGTGGACGCTTCGGTGTGATTGGATTCAGGGATATTGGGAGGAAACTAGAACCAAGCAGCTAAGGGAGAAACGTTGTATTACGAATGTTGCGAGGAATCATGTGAGTCAACAAATGACATTTAAATTGTTTACAGATGTGGCCGTTCCACATCACACAGAAGGATTTGAATTGGGAGCGATGATTCTTGGATCGAATGGTGAACTAAAAGGAGCAATGGAAATGATTGATCTGATATTTTACATGCCTTTGTCTGTAGAGATACAAGTCATTATGCAAGGGATTCGTCTATTAAAGCGAATGTAA

Coding sequence (CDS)

ATGCCGTCCACCGCTCTCTCTCTCCGTCTGCAACCTATCGATCGCGCCGCTGCTGCTCGATCCGTGCGCTGCTGCGTTGCCGCTCGCCGACGATCCGTGCGCCGCCGCCTCCCCGATTTCAGATCTGCACGCTGCCGCCATCTCGCCGCCGTGAACCGCCGCTATTCGTCGTCTCCTGAAGCGTCGTTGCAGCCACGAGCAGCCACTGCCACCCCCGATTTCGTCTGTCGATTCAAATCTGTTCGACGCCTTCAGCTAGTGGCTTTCGATTTCAAGGTGTCTGTGGCGTTGGAGGCCGAATTGTCGAATTGGAGCGAAGTTGGAAATTGGACAGCGAGCAGTAGTTTCATTTGGTGTTGGACTGTTGTACAATGTGTGTTGTCTGGTATTGTTAGTGGACGACGGGGAGTTGTGTTTTATCTCTGTTTAGGAGTGTTGTTGCCGCCTTCGTTTCTTGTTCTTGAGTTTGTTGGAGTCGTGATGGTGCGTAACAGTTTAGCTTGTCGTAGGAGTAGAGACCTCCCAAAACTCCCACCTGTGCCTATCAAGATTCCTTCTTCTCTGCCGGAAGGTCGAATAGAGCGGCGGACTCAGACTCGGCGGAAAGAGCGAGTTGAGAGGAGATTTTATGATCGCTCATGTGGGACTTATTCGATTAAGAGCGAATATAAAATCGCTTTGAGTTTATTGATGGGCCAAGTGTCTTCAAGCATGAACACTCAGAGGAGATGGTGGGAGCATTATGGAAAGCGAAGTTACTGTCCAAAGTTAAGTTATTTATTTGGAAAGTGTATCACCCGTGCTAACCGAAAAACTGGTGCCTTTGGAAAAGAGACGAATGCCAAGATTAGGAACGTGAATAATTTTCTTGATCGCTTAATCTGGCTAGTGGCTCAGTTACATCAGACGGAGTTCGAGAAGGCATGTATAGCTTTCTGGGCTATATGGAATGATAGGAATGAGTTTCATAAGGAAACGCCTCTTATGGAGTGGACGCTTCGGTGTGATTGGATTCAGGGATATTGGGAGGAAACTAGAACCAAGCAGCTAAGGGAGAAACGTTGTATTACGAATGTTGCGAGGAATCATGTGAGTCAACAAATGACATTTAAATTGTTTACAGATGTGGCCGTTCCACATCACACAGAAGGATTTGAATTGGGAGCGATGATTCTTGGATCGAATGGTGAACTAAAAGGAGCAATGGAAATGATTGATCTGATATTTTACATGCCTTTGTCTGTAGAGATACAAGTCATTATGCAAGGGATTCGTCTATTAAAGCGAATGTAA

Protein sequence

MPSTALSLRLQPIDRAAAARSVRCCVAARRRSVRRRLPDFRSARCRHLAAVNRRYSSSPEASLQPRAATATPDFVCRFKSVRRLQLVAFDFKVSVALEAELSNWSEVGNWTASSSFIWCWTVVQCVLSGIVSGRRGVVFYLCLGVLLPPSFLVLEFVGVVMVRNSLACRRSRDLPKLPPVPIKIPSSLPEGRIERRTQTRRKERVERRFYDRSCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWEHYGKRSYCPKLSYLFGKCITRANRKTGAFGKETNAKIRNVNNFLDRLIWLVAQLHQTEFEKACIAFWAIWNDRNEFHKETPLMEWTLRCDWIQGYWEETRTKQLREKRCITNVARNHVSQQMTFKLFTDVAVPHHTEGFELGAMILGSNGELKGAMEMIDLIFYMPLSVEIQVIMQGIRLLKRM
Homology
[Close]
BLAST of Lag0021916 vs. NCBI nr
Match: KAF4393206.1 (hypothetical protein G4B88_001940 [Cannabis sativa])

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-06
Identity = 61/235 (25.96%), Postives = 99/235 (42.13%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWE------------HYGKRSY---CPKL 272
           S G YS+KS Y +A+     Q SSS      WW             H+G + +    P  
Sbjct: 307 SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSAYWAIKIPKKILHFGWKGFHEILPSF 366

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 367 SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 426

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 427 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTPHQIKI-WISSYYNEICRERNKTK 486

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++  ++KLF D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 487 KGVSTGCTSEQSNTETEVNSYKLFVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 538

[Close]
BLAST of Lag0021916 vs. NCBI nr
Match: KAF4380668.1 (hypothetical protein F8388_017022 [Cannabis sativa])

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-06
Identity = 61/235 (25.96%), Postives = 99/235 (42.13%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWE------------HYGKRSY---CPKL 272
           S G YS+KS Y +A+     Q SSS      WW             H+G + +    P  
Sbjct: 439 SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSAYWAIKIPKKILHFGWKGFHEILPSF 498

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 499 SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 558

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 559 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTPHQIKI-WISSYYNEICRERNKTK 618

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++  ++KLF D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 619 KGVSTGCTSEQSNTETEVNSYKLFVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 670

[Close]
BLAST of Lag0021916 vs. NCBI nr
Match: KAF4401765.1 (hypothetical protein G4B88_000813 [Cannabis sativa])

HSP 1 Score: 63.2 bits (152), Expect = 6.5e-06
Identity = 60/235 (25.53%), Postives = 96/235 (40.85%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWEHY---------------GKRSYCPKL 272
           S G YS+KS Y +A+     Q SSS      WW  Y               G     P  
Sbjct: 14  SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSSYWAIKIPKKILHFGWKGFHEILPSF 73

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 74  SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 133

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 134 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTPHQIKI-WISSYYNEICRERNKTK 193

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++  ++KL+ D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 194 KGVSTGCTSEQSNTETEVNSYKLYVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 245

[Close]
BLAST of Lag0021916 vs. NCBI nr
Match: KAF4401531.1 (hypothetical protein G4B88_001725 [Cannabis sativa])

HSP 1 Score: 63.2 bits (152), Expect = 6.5e-06
Identity = 60/235 (25.53%), Postives = 95/235 (40.43%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWEHY---------------GKRSYCPKL 272
           S G YS+KS Y +A+     Q SSS      WW  Y               G     P  
Sbjct: 50  SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSSYWAIKIPKKILHFGWKGFHEILPSF 109

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 110 SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 169

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 170 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTSHQIKI-WISSYYNEICRERNKTK 229

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++   +KL+ D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 230 KGVSTGCTSEQSNTETEVNNYKLYVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 281

[Close]
BLAST of Lag0021916 vs. NCBI nr
Match: KAF4371412.1 (hypothetical protein F8388_001940 [Cannabis sativa])

HSP 1 Score: 63.2 bits (152), Expect = 6.5e-06
Identity = 60/235 (25.53%), Postives = 95/235 (40.43%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWEHY---------------GKRSYCPKL 272
           S G YS+KS Y +A+     Q SSS      WW  Y               G     P  
Sbjct: 75  SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSSYWAIKIPKKILHFGWKGFHEILPSF 134

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 135 SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 194

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 195 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTSHQIKI-WISSYYNEICRERNKTK 254

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++   +KL+ D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 255 KGVSTGCTSEQSNTETEVNNYKLYVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 306

[Close]
BLAST of Lag0021916 vs. ExPASy TrEMBL
Match: A0A7J6HCY8 (zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_001940 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-06
Identity = 61/235 (25.96%), Postives = 99/235 (42.13%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWE------------HYGKRSY---CPKL 272
           S G YS+KS Y +A+     Q SSS      WW             H+G + +    P  
Sbjct: 307 SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSAYWAIKIPKKILHFGWKGFHEILPSF 366

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 367 SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 426

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 427 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTPHQIKI-WISSYYNEICRERNKTK 486

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++  ++KLF D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 487 KGVSTGCTSEQSNTETEVNSYKLFVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 538

[Close]
BLAST of Lag0021916 vs. ExPASy TrEMBL
Match: A0A7J6GCX0 (zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_017022 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-06
Identity = 61/235 (25.96%), Postives = 99/235 (42.13%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWE------------HYGKRSY---CPKL 272
           S G YS+KS Y +A+     Q SSS      WW             H+G + +    P  
Sbjct: 439 SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSAYWAIKIPKKILHFGWKGFHEILPSF 498

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 499 SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 558

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 559 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTPHQIKI-WISSYYNEICRERNKTK 618

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++  ++KLF D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 619 KGVSTGCTSEQSNTETEVNSYKLFVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 670

[Close]
BLAST of Lag0021916 vs. ExPASy TrEMBL
Match: A0A7J6E3F5 (zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_020166 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-06
Identity = 60/235 (25.53%), Postives = 96/235 (40.85%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWEHY---------------GKRSYCPKL 272
           S G YS+KS Y +A+     Q SSS      WW  Y               G     P  
Sbjct: 139 SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSSYWAIKIPKKILHFGWKGFHEILPSF 198

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 199 SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 258

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 259 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTPHQIKI-WISSYYNEICRERNKTK 318

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++  ++KL+ D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 319 KGVSTGCTSEQSNTETEVNSYKLYVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 370

[Close]
BLAST of Lag0021916 vs. ExPASy TrEMBL
Match: A0A7J6I3I0 (zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_000813 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-06
Identity = 60/235 (25.53%), Postives = 96/235 (40.85%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWEHY---------------GKRSYCPKL 272
           S G YS+KS Y +A+     Q SSS      WW  Y               G     P  
Sbjct: 14  SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSSYWAIKIPKKILHFGWKGFHEILPSF 73

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 74  SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 133

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 134 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTPHQIKI-WISSYYNEICRERNKTK 193

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++  ++KL+ D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 194 KGVSTGCTSEQSNTETEVNSYKLYVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 245

[Close]
BLAST of Lag0021916 vs. ExPASy TrEMBL
Match: A0A7J6FL26 (zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_001940 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-06
Identity = 60/235 (25.53%), Postives = 95/235 (40.43%), Query Frame = 0 

Query: 213 SCGTYSIKSEYKIALSLLMGQVSSSMNTQRRWWEHY---------------GKRSYCPKL 272
           S G YS+KS Y +A+     Q SSS      WW  Y               G     P  
Sbjct: 75  SHGHYSVKSGYNLAIGGENLQPSSSNEVMAAWWSSYWAIKIPKKILHFGWKGFHEILPSF 134

Query: 273 SYLFGK-CITRANRKTGAFGKETNAKI----------------------RNVNNFLDRLI 332
           S LF +   + +N     FG +TNA                        +    F   L+
Sbjct: 135 SGLFRRQSSSHSNCPICGFGNDTNAHAIFWCSFSQVIWKEMSFPFLASPKEDLTFKGVLL 194

Query: 333 WLVAQLHQTEFEKACIAFWAIWNDRN-EFHKETPLMEWTLRCDWIQGYWEETRTKQLREK 392
           +    L + +FEK  I+ W IW +RN + H  T      ++  WI  Y+ E   ++ + K
Sbjct: 195 YASEILEKEDFEKVLISAWTIWFERNKKSHGRTIRTSHQIKI-WISSYYNEICRERNKTK 254

Query: 393 RCI----TNVARNHVSQQMTFKLFTDVAV--PHHTEGFELGAMILGSNGELKGAM 403
           + +    T+   N  ++   +KL+ D A+  P +  GF  GA+I  S+ ++K A+
Sbjct: 255 KGVSTGCTSEQSNTETEVNNYKLYVDAAISTPQNVIGF--GAVIFSSDKQMKAAL 306

The following BLAST results are available for this feature:
BLAST of Lag0021916 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF4393206.12.9e-0625.96hypothetical protein G4B88_001940 [Cannabis sativa][more]
KAF4380668.12.9e-0625.96hypothetical protein F8388_017022 [Cannabis sativa][more]
KAF4401765.16.5e-0625.53hypothetical protein G4B88_000813 [Cannabis sativa][more]
KAF4401531.16.5e-0625.53hypothetical protein G4B88_001725 [Cannabis sativa][more]
KAF4371412.16.5e-0625.53hypothetical protein F8388_001940 [Cannabis sativa][more]
BLAST of Lag0021916 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0021916 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J6HCY81.4e-0625.96zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_001940 PE=4... [more]
A0A7J6GCX01.4e-0625.96zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_017022 PE=4... [more]
A0A7J6E3F53.1e-0625.53zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_020166 PE=4... [more]
A0A7J6I3I03.1e-0625.53zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_000813 PE=4... [more]
A0A7J6FL263.1e-0625.53zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_001940 PE=4... [more]
BLAST of Lag0021916 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021916.1Lag0021916.1mRNA