Homology
BLAST of Lag0021888 vs. NCBI nr
Match:
XP_038878176.1 (pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida] >XP_038878177.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida])
HSP 1 Score: 407.1 bits (1045), Expect = 1.1e-109
Identity = 203/235 (86.38%), Postives = 218/235 (92.77%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MG L+FHFPQLGLRQ+LTNP +HCCTAAPPPNIICGLRKGLRKPLGRSRVPS EA
Sbjct: 1 MKSTLMGSLQFHFPQLGLRQDLTNPSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSIEA 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAKS SKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQV+KF+++E+W
Sbjct: 61 IQAVQSLKLAKSTSKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFIQNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYHGMILM GKNK+IEMAEEIFH+LKKDGLEPD RAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLRLYHGMILMTGKNKMIEMAEEIFHKLKKDGLEPDIRAFNEMMGAYLQVDMVERAV 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVE 257
E Y LMKASGCTPDKLTFKIL KNLEKF E+FA VVKKEC YLDSPEKFL++VE
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLEKFREEFAAVVKKECNVYLDSPEKFLNDVE 235
BLAST of Lag0021888 vs. NCBI nr
Match:
XP_023527118.1 (pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 406.4 bits (1043), Expect = 1.9e-109
Identity = 200/240 (83.33%), Postives = 220/240 (91.67%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+
Sbjct: 1 MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAY+QV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYMQVDMVERAV 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK 261
E Y LMKASGC PDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLMK 240
BLAST of Lag0021888 vs. NCBI nr
Match:
XP_022980054.1 (pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima])
HSP 1 Score: 404.4 bits (1038), Expect = 7.2e-109
Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ H PQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+
Sbjct: 1 MKSTLMGRLQLHLPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYH MI M+GKNK+IEMAEE+FH+ K+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHDFKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK 261
E Y LMKASGCTPDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLMK 240
BLAST of Lag0021888 vs. NCBI nr
Match:
KAG6582003.1 (hypothetical protein SDJN03_22005, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018426.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 397.9 bits (1021), Expect = 6.8e-107
Identity = 196/231 (84.85%), Postives = 214/231 (92.64%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+IICGLRKG RKPLG+SRVPSTE+
Sbjct: 1 MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPDIICGLRKGQRKPLGKSRVPSTES 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD++LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLSLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFL 253
E Y LMKASGC PDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFL 231
BLAST of Lag0021888 vs. NCBI nr
Match:
XP_022955796.1 (pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita moschata])
HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-106
Identity = 195/231 (84.42%), Postives = 212/231 (91.77%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+ ICGLRKG RKPLG+SRVPSTE+
Sbjct: 1 MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPDTICGLRKGQRKPLGKSRVPSTES 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFL 253
E Y LMKASGC PDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFL 231
BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match:
Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 7.2e-19
Identity = 55/167 (32.93%), Postives = 97/167 (58.08%), Query Frame = 0
Query: 78 STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFM 137
S E + A + LK ++ S +++ I S +SRLLK+DL L E QRQN++ L +++Y+ +
Sbjct: 2 SKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEVV 61
Query: 138 RDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGM 197
R E W PD+ Y M++ML +NK ++ ++++ +LKK+ + D F +++ +L +
Sbjct: 62 RREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNEL 121
Query: 198 VERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAE 244
A+ +YG M+ S P L F+++ K L + E E VK + E
Sbjct: 122 PLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPE-LREKVKDDFLE 167
BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match:
Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 4.0e-17
Identity = 49/161 (30.43%), Postives = 97/161 (60.25%), Query Frame = 0
Query: 68 RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNE 127
R PL R ++ EA+ + LK L + K++ I + + RLLK D+ + EL+RQ E
Sbjct: 63 RGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEE 122
Query: 128 LELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFN 187
L++++++ ++ ++W +PD+ +Y +I+ L K+K ++ A ++ ++KK+ L PD++ +
Sbjct: 123 TALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYT 182
Query: 188 EMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNL 227
E++ +L+ G A+ +Y M S P++L F++L K L
Sbjct: 183 EVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223
BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match:
Q9LVW6 (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 6.5e-12
Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 0
Query: 58 NIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL 117
+I CG R R PL + R+ STEAIQ++QSLK A + L RL+K+DL L
Sbjct: 30 SIRCGPRDN-RGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVL 89
Query: 118 TELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGL 177
EL RQ+ L++ V +R E + D+ LY ++ L +NK + + + E+
Sbjct: 90 RELLRQDYCTLAVHVLSTLRTE-YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGIDQ 149
Query: 178 EPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASG-----CTPDKLTFKILFKNLEKFGE 232
D +A +++ A + E V +Y LM+ SG D+ ++L K L + GE
Sbjct: 150 RSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGE 206
BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match:
O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 4.2e-11
Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 0
Query: 128 LSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEM 187
+S ++Y MR +P+I Y ++ + L E AEEIF +L++DGLEPD +N +
Sbjct: 282 MSWKLYCEMRSHQ-CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 341
Query: 188 MGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKIL 223
M +Y + G A E++ LM+ GC PD+ ++ I+
Sbjct: 342 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match:
Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)
HSP 1 Score: 68.9 bits (167), Expect = 9.5e-11
Identity = 43/153 (28.10%), Postives = 81/153 (52.94%), Query Frame = 0
Query: 74 SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVY 133
+++ S +AI + + KS + + L R + L + +T L+ E ++QV+
Sbjct: 82 TKIASRKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALR----WESAIQVF 141
Query: 134 KFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQ 193
+ +R++ W +P++ +Y +I+MLGK K E A E+F E+ +G + + ++ AY +
Sbjct: 142 ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR 201
Query: 194 VGMVERAVEMYGLMKAS-GCTPDKLTFKILFKN 226
G + A + MK+S C PD T+ IL K+
Sbjct: 202 SGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230
BLAST of Lag0021888 vs. ExPASy TrEMBL
Match:
A0A6J1IY98 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita maxima OX=3661 GN=LOC111479570 PE=4 SV=1)
HSP 1 Score: 404.4 bits (1038), Expect = 3.5e-109
Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ H PQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+
Sbjct: 1 MKSTLMGRLQLHLPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYH MI M+GKNK+IEMAEE+FH+ K+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHDFKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK 261
E Y LMKASGCTPDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLMK 240
BLAST of Lag0021888 vs. ExPASy TrEMBL
Match:
A0A6J1GUU8 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita moschata OX=3662 GN=LOC111457678 PE=4 SV=1)
HSP 1 Score: 395.6 bits (1015), Expect = 1.6e-106
Identity = 195/231 (84.42%), Postives = 212/231 (91.77%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+ ICGLRKG RKPLG+SRVPSTE+
Sbjct: 1 MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPDTICGLRKGQRKPLGKSRVPSTES 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFL 253
E Y LMKASGC PDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFL 231
BLAST of Lag0021888 vs. ExPASy TrEMBL
Match:
A0A5A7TQZ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002830 PE=4 SV=1)
HSP 1 Score: 392.1 bits (1006), Expect = 1.8e-105
Identity = 190/233 (81.55%), Postives = 214/233 (91.85%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ HFPQLGLRQNLTN +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EA
Sbjct: 1 MKSTLMGRLQLHFPQLGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAK SKMEDVIN+KLSRLLKADLFDALTELQRQNELELSLQV+KFM++E+W
Sbjct: 61 IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN 255
+ Y LM ASGCTPDKLTFKIL KNLEKF E+FA VVKK+C EYLD+P+KF ++
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCHEYLDNPQKFFND 233
BLAST of Lag0021888 vs. ExPASy TrEMBL
Match:
A0A5D3CZ95 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001960 PE=4 SV=1)
HSP 1 Score: 391.0 bits (1003), Expect = 4.0e-105
Identity = 189/233 (81.12%), Postives = 214/233 (91.85%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ HFP+LGLRQNLTN +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EA
Sbjct: 1 MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAK SKMEDVIN+KLSRLLKADLFDALTELQRQNELELSLQV+KFM++E+W
Sbjct: 61 IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN 255
+ Y LM ASGCTPDKLTFKIL KNLEKF E+FA VVKK+C EYLD+P+KF ++
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFND 233
BLAST of Lag0021888 vs. ExPASy TrEMBL
Match:
A0A1S3BX97 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucumis melo OX=3656 GN=LOC103494600 PE=4 SV=1)
HSP 1 Score: 391.0 bits (1003), Expect = 4.0e-105
Identity = 189/233 (81.12%), Postives = 214/233 (91.85%), Query Frame = 0
Query: 22 MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
MKS +MGRL+ HFP+LGLRQNLTN +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EA
Sbjct: 1 MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60
Query: 82 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
IQAVQSLKLAK SKMEDVIN+KLSRLLKADLFDALTELQRQNELELSLQV+KFM++E+W
Sbjct: 61 IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120
Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180
Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN 255
+ Y LM ASGCTPDKLTFKIL KNLEKF E+FA VVKK+C EYLD+P+KF ++
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFND 233
BLAST of Lag0021888 vs. TAIR 10
Match:
AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )
HSP 1 Score: 108.2 bits (269), Expect = 1.0e-23
Identity = 69/207 (33.33%), Postives = 112/207 (54.11%), Query Frame = 0
Query: 68 RKPLGRSRVPSTEAIQAVQSLKLA----------------KSASKMEDVINSKLSRLLKA 127
RKPL R R+ S EAIQAVQ+LK A S++ ++ VI SK RLLK
Sbjct: 496 RKPLQRGRMLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVIISKFRRLLKF 555
Query: 128 DLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHE 187
D+ L EL RQNE L+L+V++ +R E W +P + +Y MI ++ N L+E ++
Sbjct: 556 DMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVNYLYSA 615
Query: 188 LKKD-GLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFG 247
+K + GL + FN ++ L + + ++ Y M++ G PD+ +F++L LE G
Sbjct: 616 MKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFRVLVLGLESNG 675
Query: 248 EK-FAEVVKKECAEYLDSPEKFLDNVE 257
E + +V+++ EY +F++ E
Sbjct: 676 EMGLSAIVRQDAHEYYGESLEFIEEDE 702
BLAST of Lag0021888 vs. TAIR 10
Match:
AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 95.9 bits (237), Expect = 5.1e-20
Identity = 55/167 (32.93%), Postives = 97/167 (58.08%), Query Frame = 0
Query: 78 STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFM 137
S E + A + LK ++ S +++ I S +SRLLK+DL L E QRQN++ L +++Y+ +
Sbjct: 2 SKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEVV 61
Query: 138 RDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGM 197
R E W PD+ Y M++ML +NK ++ ++++ +LKK+ + D F +++ +L +
Sbjct: 62 RREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNEL 121
Query: 198 VERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAE 244
A+ +YG M+ S P L F+++ K L + E E VK + E
Sbjct: 122 PLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPE-LREKVKDDFLE 167
BLAST of Lag0021888 vs. TAIR 10
Match:
AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 90.1 bits (222), Expect = 2.8e-18
Identity = 49/161 (30.43%), Postives = 97/161 (60.25%), Query Frame = 0
Query: 68 RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNE 127
R PL R ++ EA+ + LK L + K++ I + + RLLK D+ + EL+RQ E
Sbjct: 63 RGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEE 122
Query: 128 LELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFN 187
L++++++ ++ ++W +PD+ +Y +I+ L K+K ++ A ++ ++KK+ L PD++ +
Sbjct: 123 TALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYT 182
Query: 188 EMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNL 227
E++ +L+ G A+ +Y M S P++L F++L K L
Sbjct: 183 EVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223
BLAST of Lag0021888 vs. TAIR 10
Match:
AT3G27750.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 72.8 bits (177), Expect = 4.7e-13
Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 0
Query: 58 NIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL 117
+I CG R R PL + R+ STEAIQ++QSLK A + L RL+K+DL L
Sbjct: 30 SIRCGPRDN-RGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVL 89
Query: 118 TELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGL 177
EL RQ+ L++ V +R E + D+ LY ++ L +NK + + + E+
Sbjct: 90 RELLRQDYCTLAVHVLSTLRTE-YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGIDQ 149
Query: 178 EPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASG-----CTPDKLTFKILFKNLEKFGE 232
D +A +++ A + E V +Y LM+ SG D+ ++L K L + GE
Sbjct: 150 RSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGE 206
BLAST of Lag0021888 vs. TAIR 10
Match:
AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 68.9 bits (167), Expect = 6.7e-12
Identity = 43/153 (28.10%), Postives = 81/153 (52.94%), Query Frame = 0
Query: 74 SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVY 133
+++ S +AI + + KS + + L R + L + +T L+ E ++QV+
Sbjct: 82 TKIASRKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALR----WESAIQVF 141
Query: 134 KFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQ 193
+ +R++ W +P++ +Y +I+MLGK K E A E+F E+ +G + + ++ AY +
Sbjct: 142 ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR 201
Query: 194 VGMVERAVEMYGLMKAS-GCTPDKLTFKILFKN 226
G + A + MK+S C PD T+ IL K+
Sbjct: 202 SGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038878176.1 | 1.1e-109 | 86.38 | pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida] >... | [more] |
XP_023527118.1 | 1.9e-109 | 83.33 | pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp... | [more] |
XP_022980054.1 | 7.2e-109 | 82.92 | pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima] | [more] |
KAG6582003.1 | 6.8e-107 | 84.85 | hypothetical protein SDJN03_22005, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022955796.1 | 3.4e-106 | 84.42 | pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q1PFH7 | 7.2e-19 | 32.93 | Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX... | [more] |
Q9STF9 | 4.0e-17 | 30.43 | Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702... | [more] |
Q9LVW6 | 6.5e-12 | 31.84 | Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T... | [more] |
O82178 | 4.2e-11 | 35.79 | Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX... | [more] |
Q9FKC3 | 9.5e-11 | 28.10 | Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IY98 | 3.5e-109 | 82.92 | pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita maxima O... | [more] |
A0A6J1GUU8 | 1.6e-106 | 84.42 | pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita moschata... | [more] |
A0A5A7TQZ8 | 1.8e-105 | 81.55 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3CZ95 | 4.0e-105 | 81.12 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BX97 | 4.0e-105 | 81.12 | pentatricopeptide repeat-containing protein At1g62350-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT5G09320.1 | 1.0e-23 | 33.33 | Vacuolar sorting protein 9 (VPS9) domain | [more] |
AT1G62350.1 | 5.1e-20 | 32.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G46870.1 | 2.8e-18 | 30.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G27750.1 | 4.7e-13 | 31.84 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT5G48730.1 | 6.7e-12 | 28.10 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |