Lag0021888 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021888
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr7: 13514882 .. 13516233 (+)
RNA-Seq ExpressionLag0021888
SyntenyLag0021888
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAATTCCTCCCATTTGAACTGAGTTTCTCGCAAAAGAGGTGGTCGCCGGTGGAGGAGATGAAATCTATTGTAATGGGTCGTCTAGAATTCCATTTTCCTCAATTGGGTCTACGCCAAAACCTCACAAACCCAGGCGTCCATTGTTGTACGGCAGCTCCACCTCCAAATATCATCTGCGGCCTCAGGAAAGGCCTTAGGAAGCCCTTGGGGAGGTCAAGGGTGCCCTCCACTGAGGCCATTCAGGCAGTTCAGTCCCTCAAGCTCGCTAAATCCGCCTCAAAAATGGAGGACGTAATCAATAGCAAACTCAGCAGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGACAAAATGAACTGGAACTATCGCTCCAGGTATTGCTTAACTACTGTTTATCGTCTGGGGATACTGTAAAATCCAGATGCGTTATCCTTAAAGTTATGAAAATCTTATAATTCTACCTTGAATTCTCTTAGTGGCTGGCTTTAGTTGCAATAATTTCATAAGTTGGAGAGTTTAAGTCGATAGCAGGGTTGTTTAGAATTCTGGGTTTAGAGTTTAATGGTAACAACTTCGAAAATGAGCATAATTAATGCGTTTCTCAAGTTACAACTAACAAAGTTTTGCAAAAGTTTGGAGGTAATTGCTCAAATTAAAAGTTGGATGGTGTGATTGTTACTGTATTTTTGCATTTTGTTTAGCTATCCTACTAACTATAGCATTATGCACTAAAGAAAATAGATCTCTGTAAACTTAGTTTGGTTTAAGAATGTCTGTGGTTTGTTATTTGGTTGGATTTTTTCCTTTGCAAGAGCTCCAATGCTTTGACATTCTGATGAAAAAGTTGACGGGAATGATACATTTGATTCTCCTCTGCAGCCTATAGTGTTCCTGCCACTATAAGTTTTATTCCATCTTAACTGAATTCAGGCTTTAGGTCTATAAATTTATGCGTGATGAAGATTGGGTCGAGCCAGATATAACCTTGTACCATGGGATGATTCTGATGTTGGGAAAGAACAAACTGATCGAAATGGCTGAAGAGATCTTCCATGAGTTAAAAAAGGATGGCTTAGAACCAGACACAAGAGCTTTTAATGAGATGATGGGAGCATATTTGCAAGTGGGCATGGTCGAAAGAGCGGTTGAGATGTATGGATTAATGAAAGCATCAGGTTGTACTCCAGATAAACTGACTTTCAAAATTTTGTTCAAGAATCTCGAGAAGTTTGGGGAAAAGTTTGCTGAAGTGGTGAAGAAAGAATGTGCTGAGTACTTGGATTCTCCTGAGAAGTTCCTCGACAATGTTGAATGGAGACTCGTAAAAGATTGA

mRNA sequence

ATGGTCAAATTCCTCCCATTTGAACTGAGTTTCTCGCAAAAGAGGTGGTCGCCGGTGGAGGAGATGAAATCTATTGTAATGGGTCGTCTAGAATTCCATTTTCCTCAATTGGGTCTACGCCAAAACCTCACAAACCCAGGCGTCCATTGTTGTACGGCAGCTCCACCTCCAAATATCATCTGCGGCCTCAGGAAAGGCCTTAGGAAGCCCTTGGGGAGGTCAAGGGTGCCCTCCACTGAGGCCATTCAGGCAGTTCAGTCCCTCAAGCTCGCTAAATCCGCCTCAAAAATGGAGGACGTAATCAATAGCAAACTCAGCAGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGACAAAATGAACTGGAACTATCGCTCCAGGTCTATAAATTTATGCGTGATGAAGATTGGGTCGAGCCAGATATAACCTTGTACCATGGGATGATTCTGATGTTGGGAAAGAACAAACTGATCGAAATGGCTGAAGAGATCTTCCATGAGTTAAAAAAGGATGGCTTAGAACCAGACACAAGAGCTTTTAATGAGATGATGGGAGCATATTTGCAAGTGGGCATGGTCGAAAGAGCGGTTGAGATGTATGGATTAATGAAAGCATCAGGTTGTACTCCAGATAAACTGACTTTCAAAATTTTGTTCAAGAATCTCGAGAAGTTTGGGGAAAAGTTTGCTGAAGTGGTGAAGAAAGAATGTGCTGAGTACTTGGATTCTCCTGAGAAGTTCCTCGACAATGTTGAATGGAGACTCGTAAAAGATTGA

Coding sequence (CDS)

ATGGTCAAATTCCTCCCATTTGAACTGAGTTTCTCGCAAAAGAGGTGGTCGCCGGTGGAGGAGATGAAATCTATTGTAATGGGTCGTCTAGAATTCCATTTTCCTCAATTGGGTCTACGCCAAAACCTCACAAACCCAGGCGTCCATTGTTGTACGGCAGCTCCACCTCCAAATATCATCTGCGGCCTCAGGAAAGGCCTTAGGAAGCCCTTGGGGAGGTCAAGGGTGCCCTCCACTGAGGCCATTCAGGCAGTTCAGTCCCTCAAGCTCGCTAAATCCGCCTCAAAAATGGAGGACGTAATCAATAGCAAACTCAGCAGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGACAAAATGAACTGGAACTATCGCTCCAGGTCTATAAATTTATGCGTGATGAAGATTGGGTCGAGCCAGATATAACCTTGTACCATGGGATGATTCTGATGTTGGGAAAGAACAAACTGATCGAAATGGCTGAAGAGATCTTCCATGAGTTAAAAAAGGATGGCTTAGAACCAGACACAAGAGCTTTTAATGAGATGATGGGAGCATATTTGCAAGTGGGCATGGTCGAAAGAGCGGTTGAGATGTATGGATTAATGAAAGCATCAGGTTGTACTCCAGATAAACTGACTTTCAAAATTTTGTTCAAGAATCTCGAGAAGTTTGGGGAAAAGTTTGCTGAAGTGGTGAAGAAAGAATGTGCTGAGTACTTGGATTCTCCTGAGAAGTTCCTCGACAATGTTGAATGGAGACTCGTAAAAGATTGA

Protein sequence

MVKFLPFELSFSQKRWSPVEEMKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVKD
Homology
BLAST of Lag0021888 vs. NCBI nr
Match: XP_038878176.1 (pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida] >XP_038878177.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida])

HSP 1 Score: 407.1 bits (1045), Expect = 1.1e-109
Identity = 203/235 (86.38%), Postives = 218/235 (92.77%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MG L+FHFPQLGLRQ+LTNP +HCCTAAPPPNIICGLRKGLRKPLGRSRVPS EA
Sbjct: 1   MKSTLMGSLQFHFPQLGLRQDLTNPSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSIEA 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAKS SKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQV+KF+++E+W
Sbjct: 61  IQAVQSLKLAKSTSKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFIQNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYHGMILM GKNK+IEMAEEIFH+LKKDGLEPD RAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLRLYHGMILMTGKNKMIEMAEEIFHKLKKDGLEPDIRAFNEMMGAYLQVDMVERAV 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVE 257
           E Y LMKASGCTPDKLTFKIL KNLEKF E+FA VVKKEC  YLDSPEKFL++VE
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLEKFREEFAAVVKKECNVYLDSPEKFLNDVE 235

BLAST of Lag0021888 vs. NCBI nr
Match: XP_023527118.1 (pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.9e-109
Identity = 200/240 (83.33%), Postives = 220/240 (91.67%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+
Sbjct: 1   MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAY+QV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYMQVDMVERAV 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK 261
           E Y LMKASGC PDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLMK 240

BLAST of Lag0021888 vs. NCBI nr
Match: XP_022980054.1 (pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima])

HSP 1 Score: 404.4 bits (1038), Expect = 7.2e-109
Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ H PQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+
Sbjct: 1   MKSTLMGRLQLHLPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYH MI M+GKNK+IEMAEE+FH+ K+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHDFKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK 261
           E Y LMKASGCTPDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLMK 240

BLAST of Lag0021888 vs. NCBI nr
Match: KAG6582003.1 (hypothetical protein SDJN03_22005, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018426.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.9 bits (1021), Expect = 6.8e-107
Identity = 196/231 (84.85%), Postives = 214/231 (92.64%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+IICGLRKG RKPLG+SRVPSTE+
Sbjct: 1   MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPDIICGLRKGQRKPLGKSRVPSTES 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD++LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLSLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFL 253
           E Y LMKASGC PDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFL 231

BLAST of Lag0021888 vs. NCBI nr
Match: XP_022955796.1 (pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita moschata])

HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-106
Identity = 195/231 (84.42%), Postives = 212/231 (91.77%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+ ICGLRKG RKPLG+SRVPSTE+
Sbjct: 1   MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPDTICGLRKGQRKPLGKSRVPSTES 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFL 253
           E Y LMKASGC PDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFL 231

BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match: Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.2e-19
Identity = 55/167 (32.93%), Postives = 97/167 (58.08%), Query Frame = 0

Query: 78  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFM 137
           S E + A + LK  ++ S +++  I S +SRLLK+DL   L E QRQN++ L +++Y+ +
Sbjct: 2   SKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEVV 61

Query: 138 RDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGM 197
           R E W  PD+  Y  M++ML +NK ++  ++++ +LKK+ +  D   F +++  +L   +
Sbjct: 62  RREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNEL 121

Query: 198 VERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAE 244
              A+ +YG M+ S   P  L F+++ K L  + E   E VK +  E
Sbjct: 122 PLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPE-LREKVKDDFLE 167

BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match: Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.0e-17
Identity = 49/161 (30.43%), Postives = 97/161 (60.25%), Query Frame = 0

Query: 68  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNE 127
           R PL R  ++   EA+  +  LK L +   K++  I + + RLLK D+   + EL+RQ E
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEE 122

Query: 128 LELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFN 187
             L++++++ ++ ++W +PD+ +Y  +I+ L K+K ++ A  ++ ++KK+ L PD++ + 
Sbjct: 123 TALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYT 182

Query: 188 EMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNL 227
           E++  +L+ G    A+ +Y  M  S   P++L F++L K L
Sbjct: 183 EVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223

BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match: Q9LVW6 (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.5e-12
Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 0

Query: 58  NIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL 117
           +I CG R   R PL + R+ STEAIQ++QSLK A        +    L RL+K+DL   L
Sbjct: 30  SIRCGPRDN-RGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVL 89

Query: 118 TELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGL 177
            EL RQ+   L++ V   +R E +   D+ LY  ++  L +NK  +  + +  E+     
Sbjct: 90  RELLRQDYCTLAVHVLSTLRTE-YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGIDQ 149

Query: 178 EPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASG-----CTPDKLTFKILFKNLEKFGE 232
             D +A  +++ A +     E  V +Y LM+ SG        D+   ++L K L + GE
Sbjct: 150 RSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGE 206

BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match: O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.2e-11
Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 0

Query: 128 LSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEM 187
           +S ++Y  MR     +P+I  Y  ++    +  L E AEEIF +L++DGLEPD   +N +
Sbjct: 282 MSWKLYCEMRSHQ-CKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 341

Query: 188 MGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKIL 223
           M +Y + G    A E++ LM+  GC PD+ ++ I+
Sbjct: 342 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375

BLAST of Lag0021888 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 9.5e-11
Identity = 43/153 (28.10%), Postives = 81/153 (52.94%), Query Frame = 0

Query: 74  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVY 133
           +++ S +AI  +   +  KS  + +      L R +   L + +T L+     E ++QV+
Sbjct: 82  TKIASRKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALR----WESAIQVF 141

Query: 134 KFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQ 193
           + +R++ W +P++ +Y  +I+MLGK K  E A E+F E+  +G   +   +  ++ AY +
Sbjct: 142 ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR 201

Query: 194 VGMVERAVEMYGLMKAS-GCTPDKLTFKILFKN 226
            G  + A  +   MK+S  C PD  T+ IL K+
Sbjct: 202 SGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230

BLAST of Lag0021888 vs. ExPASy TrEMBL
Match: A0A6J1IY98 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita maxima OX=3661 GN=LOC111479570 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.5e-109
Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ H PQLG RQNLTNP +HCCTA PPPNIICGLRKG RKPLG+SRVPSTE+
Sbjct: 1   MKSTLMGRLQLHLPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYH MI M+GKNK+IEMAEE+FH+ K+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHDFKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDNVEWRLVK 261
           E Y LMKASGCTPDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL +VE +L+K
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKLMK 240

BLAST of Lag0021888 vs. ExPASy TrEMBL
Match: A0A6J1GUU8 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita moschata OX=3662 GN=LOC111457678 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.6e-106
Identity = 195/231 (84.42%), Postives = 212/231 (91.77%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ HFPQLG RQNLTNP +HCCTA PPP+ ICGLRKG RKPLG+SRVPSTE+
Sbjct: 1   MKSTLMGRLQLHFPQLGFRQNLTNPTLHCCTAGPPPDTICGLRKGQRKPLGKSRVPSTES 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQRQNELELSLQV+KFMR+E+W
Sbjct: 61  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHELKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFL 253
           E Y LMKASGC PDKLTFKIL KNLE+F E+FA VVKKECAE+LDSPEKFL
Sbjct: 181 ETYELMKASGCIPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFL 231

BLAST of Lag0021888 vs. ExPASy TrEMBL
Match: A0A5A7TQZ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002830 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.8e-105
Identity = 190/233 (81.55%), Postives = 214/233 (91.85%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ HFPQLGLRQNLTN  +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EA
Sbjct: 1   MKSTLMGRLQLHFPQLGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQRQNELELSLQV+KFM++E+W
Sbjct: 61  IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA 
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN 255
           + Y LM ASGCTPDKLTFKIL KNLEKF E+FA VVKK+C EYLD+P+KF ++
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCHEYLDNPQKFFND 233

BLAST of Lag0021888 vs. ExPASy TrEMBL
Match: A0A5D3CZ95 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001960 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.0e-105
Identity = 189/233 (81.12%), Postives = 214/233 (91.85%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ HFP+LGLRQNLTN  +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EA
Sbjct: 1   MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQRQNELELSLQV+KFM++E+W
Sbjct: 61  IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA 
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN 255
           + Y LM ASGCTPDKLTFKIL KNLEKF E+FA VVKK+C EYLD+P+KF ++
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFND 233

BLAST of Lag0021888 vs. ExPASy TrEMBL
Match: A0A1S3BX97 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucumis melo OX=3656 GN=LOC103494600 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.0e-105
Identity = 189/233 (81.12%), Postives = 214/233 (91.85%), Query Frame = 0

Query: 22  MKSIVMGRLEFHFPQLGLRQNLTNPGVHCCTAAPPPNIICGLRKGLRKPLGRSRVPSTEA 81
           MKS +MGRL+ HFP+LGLRQNLTN  +HCCTAAPPPNIICGLRKGL+KPLGRSRVPS EA
Sbjct: 1   MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60

Query: 82  IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFMRDEDW 141
           IQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQRQNELELSLQV+KFM++E+W
Sbjct: 61  IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120

Query: 142 VEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAV 201
            EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA 
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180

Query: 202 EMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAEYLDSPEKFLDN 255
           + Y LM ASGCTPDKLTFKIL KNLEKF E+FA VVKK+C EYLD+P+KF ++
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFND 233

BLAST of Lag0021888 vs. TAIR 10
Match: AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-23
Identity = 69/207 (33.33%), Postives = 112/207 (54.11%), Query Frame = 0

Query: 68  RKPLGRSRVPSTEAIQAVQSLKLA----------------KSASKMEDVINSKLSRLLKA 127
           RKPL R R+ S EAIQAVQ+LK A                 S++ ++ VI SK  RLLK 
Sbjct: 496 RKPLQRGRMLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVIISKFRRLLKF 555

Query: 128 DLFDALTELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHE 187
           D+   L EL RQNE  L+L+V++ +R E W +P + +Y  MI ++  N L+E    ++  
Sbjct: 556 DMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVNYLYSA 615

Query: 188 LKKD-GLEPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNLEKFG 247
           +K + GL  +   FN ++   L   + +  ++ Y  M++ G  PD+ +F++L   LE  G
Sbjct: 616 MKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFRVLVLGLESNG 675

Query: 248 EK-FAEVVKKECAEYLDSPEKFLDNVE 257
           E   + +V+++  EY     +F++  E
Sbjct: 676 EMGLSAIVRQDAHEYYGESLEFIEEDE 702

BLAST of Lag0021888 vs. TAIR 10
Match: AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 5.1e-20
Identity = 55/167 (32.93%), Postives = 97/167 (58.08%), Query Frame = 0

Query: 78  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVYKFM 137
           S E + A + LK  ++ S +++  I S +SRLLK+DL   L E QRQN++ L +++Y+ +
Sbjct: 2   SKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEVV 61

Query: 138 RDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGM 197
           R E W  PD+  Y  M++ML +NK ++  ++++ +LKK+ +  D   F +++  +L   +
Sbjct: 62  RREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNEL 121

Query: 198 VERAVEMYGLMKASGCTPDKLTFKILFKNLEKFGEKFAEVVKKECAE 244
              A+ +YG M+ S   P  L F+++ K L  + E   E VK +  E
Sbjct: 122 PLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPE-LREKVKDDFLE 167

BLAST of Lag0021888 vs. TAIR 10
Match: AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-18
Identity = 49/161 (30.43%), Postives = 97/161 (60.25%), Query Frame = 0

Query: 68  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNE 127
           R PL R  ++   EA+  +  LK L +   K++  I + + RLLK D+   + EL+RQ E
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEE 122

Query: 128 LELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFN 187
             L++++++ ++ ++W +PD+ +Y  +I+ L K+K ++ A  ++ ++KK+ L PD++ + 
Sbjct: 123 TALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYT 182

Query: 188 EMMGAYLQVGMVERAVEMYGLMKASGCTPDKLTFKILFKNL 227
           E++  +L+ G    A+ +Y  M  S   P++L F++L K L
Sbjct: 183 EVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223

BLAST of Lag0021888 vs. TAIR 10
Match: AT3G27750.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 4.7e-13
Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 0

Query: 58  NIICGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL 117
           +I CG R   R PL + R+ STEAIQ++QSLK A        +    L RL+K+DL   L
Sbjct: 30  SIRCGPRDN-RGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVL 89

Query: 118 TELQRQNELELSLQVYKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGL 177
            EL RQ+   L++ V   +R E +   D+ LY  ++  L +NK  +  + +  E+     
Sbjct: 90  RELLRQDYCTLAVHVLSTLRTE-YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGIDQ 149

Query: 178 EPDTRAFNEMMGAYLQVGMVERAVEMYGLMKASG-----CTPDKLTFKILFKNLEKFGE 232
             D +A  +++ A +     E  V +Y LM+ SG        D+   ++L K L + GE
Sbjct: 150 RSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGE 206

BLAST of Lag0021888 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 6.7e-12
Identity = 43/153 (28.10%), Postives = 81/153 (52.94%), Query Frame = 0

Query: 74  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVY 133
           +++ S +AI  +   +  KS  + +      L R +   L + +T L+     E ++QV+
Sbjct: 82  TKIASRKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALR----WESAIQVF 141

Query: 134 KFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQ 193
           + +R++ W +P++ +Y  +I+MLGK K  E A E+F E+  +G   +   +  ++ AY +
Sbjct: 142 ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR 201

Query: 194 VGMVERAVEMYGLMKAS-GCTPDKLTFKILFKN 226
            G  + A  +   MK+S  C PD  T+ IL K+
Sbjct: 202 SGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038878176.11.1e-10986.38pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida] >... [more]
XP_023527118.11.9e-10983.33pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp... [more]
XP_022980054.17.2e-10982.92pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima][more]
KAG6582003.16.8e-10784.85hypothetical protein SDJN03_22005, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022955796.13.4e-10684.42pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q1PFH77.2e-1932.93Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX... [more]
Q9STF94.0e-1730.43Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
Q9LVW66.5e-1231.84Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T... [more]
O821784.2e-1135.79Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX... [more]
Q9FKC39.5e-1128.10Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1IY983.5e-10982.92pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita maxima O... [more]
A0A6J1GUU81.6e-10684.42pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita moschata... [more]
A0A5A7TQZ81.8e-10581.55Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3CZ954.0e-10581.12Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BX974.0e-10581.12pentatricopeptide repeat-containing protein At1g62350-like OS=Cucumis melo OX=36... [more]
Match NameE-valueIdentityDescription
AT5G09320.11.0e-2333.33Vacuolar sorting protein 9 (VPS9) domain [more]
AT1G62350.15.1e-2032.93Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G46870.12.8e-1830.43Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G27750.14.7e-1331.84FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT5G48730.16.7e-1228.10Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 149..177
e-value: 9.8E-4
score: 19.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 179..226
e-value: 4.1E-11
score: 42.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 183..215
e-value: 7.9E-8
score: 30.0
coord: 149..181
e-value: 8.7E-6
score: 23.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 180..214
score: 11.476539
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 145..179
score: 10.424253
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 77..245
e-value: 2.5E-44
score: 153.1
IPR044190Protein THYLAKOID ASSEMBLY 8-likePANTHERPTHR47594PPR CONTAINING PLANT-LIKE PROTEINcoord: 39..256
NoneNo IPR availablePANTHERPTHR47594:SF5PPR CONTAINING PLANT-LIKE PROTEINcoord: 39..256

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021888.1Lag0021888.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0000373 Group II intron splicing
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding