Lag0021874 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0021874
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Senescence-specific cysteine protease sag39
Location	chr7: 13345507 .. 13349720 (-)
RNA-Seq Expression	Lag0021874
Synteny	Lag0021874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCCGGAAAAGTCATCGGCGACCGCCGGAAAAGTCGTCGACGGTCGTCGGAAAATTCGTCAGAAACTTCGCCGGCTGACGGCGGCCGACGGTCATCGGAAAAGTCAAGGAGTCGCATATGGAAGAAGTGAGGAGATAGTTACTGTAGTGGGTTGAATAATGGTTACTGTAGAAAATGGATAAAATAATCGGGGGTTAAAATAACCCACCTCACCAATTATTTTTGTTGGTGCCCCAAACATTGAATAGGCTATAATAAGGGGGTTATTATAACCTATTCAGTGCCCCAAACACCCCCTCTATATTTATTTTGTAAAACAAATACTAGATAGAGTTATAGAATTGAGAATGAAATTAAAAAATAGCATAAACATTATGCGTTAAATTATAGGTTGCAGTTATATGTTTAGTCCTTAAACTTTTAAGGTTGTGTTAATTTGGTCATTCAACCTTTTAAAGTGTCAAATAGGTTTCGAATTTTCAATTTTATGTTCAATAAGTTTCTGAGCTTTAAAAAGTATTTGGTAGGTTCTTAAACTTTCATTTTTGTGTCTAATATGTCTCCCAACTTTTAATTTTGTGCCTAATAAGTCCTTAACATATTCGAGATTTTTTAAAATTCACAAGCGTACTAGATACAAAATTGAGAGTTTAGGGTTCAAATAGACATAATATTCTTTAAAAAAAATAGATATAATATTTAATTTTATATCTAATAGATTGGTTAATTTTTTTAAATATCGAACATGTCAAGGATCTATTAGATATCAATGGTCCCTTTCATGCTTCATATGTAAGGGGGCCTATCGAGTGTCTGATTGTCCAAAGCGGGCGACCCTCCAAGCTTTCCAAGCCACATTTACCATAGATCCTAAAGCTGAAACCCCACGAAAGCTGAGACACCACAAGTCGAAGCTGAGGACAACCCTCGAATGGGGACGTTGAAATTCCTTTCTGCCCTTTCAGAAGAAAATGGGGGAGACCAAGGAACCGTTGGAAAAAAGGTTCATGTACGCTGATGCATGGGTGAATCACAAGTCGGTCAAGAGCAAGAGGGAAGATGAAAGTTGTGAACTCGACAACCCTGCTCATTATGGGAATAGCCAAGAGGGCCACAGTAAAGTTGGTATCAGAGCCTAGTTGGTTCCTAAAGTTGAAATCTGAAAGCATGTCGTCAACCAGGCAATTGGCAAAGACCCACGTGGAACATTTGGTAGAGATTGAAGAACAGTTGCTCTACTTGAGGGAAGTATCTGATGCTCTTTGGTTCTTGGAATCTCGATTGGAAGAGATTTCAACCAAGGTCGACAACATTGATGCGGTAGCTGGCCGCGTGTATGGGATGCCCATCCAACTATTTTTTTTTTTTTTTTGTTTAGATATCTATTTGACACTTTTTAAAGTTTAGAGACCTATTTGACACTTTTTAAAGTTCTCAAAAACAAGAAAATTTCATCTAAAATAAAAGTTTCTCTAATATTTTATTTATAATAAACTAGTTCCGGTGTAATGTGAATTAAGAAGAAAAAAAAAGAAATAGTCAATTACAGATGGTAGTTCAAACAGAAAGTTAACCAAATGTATATATTGTAACACTCATGCAAGTTTGGAGTTAAAATCGATATGATCTGATAAGTTTGAGGTTCAATTTTGAAGAGATTGAAAATTTAAGGTTAAAATCGGTATAACTTACTAAGTTTAGAGTTCAATTTAATGAAATTGAAAGTTGGAAATTAAAATGGATACAACCTATTAAAATTGATTTCCCCCTAGCCGGTAGGCAGTTGCAATTGCAAAGAGACGTCAGTTTCTTGTCGAACACGTCGGTCGTGCCTCCAAATTGTCTCTTTTTTTGTTTTCTTCACTTTTCCATAGTCGGTTCAAAGAACAACTATAACAGTAAGTCAATTCAAAATTTCAGATCTTAACACATTTTTCTTAGACAAAAATAAAACGAAAATTTTGATTTAAAATCACATTTCATACGTGAGCTTTTAAACTTGTTTCATTTCTATTTCTTAAATTTTAAAATGTTTACATTTTTCTTTTAAAAAAGAGATCATAATTTTAGTTTTTTTTTAGTTTATAACTTTGAGTTAAAATATACCGATGTATATAAGTTTGTCGAGATGAGTATTAAATGAGTGAATATTACATGTTAAGTGACTTAGTAATGACTAAAGTGGTAAATATTTTTTTAAAAAAAAATTATACTATTAGAACAAATATTTTAAATATTCCAGATTAAAACAAAATAATTGTGAAAATTCAAAACAAAAACGAGATGTAAAACCAACATTTTAATATAAACTTTTATACATAAAATTACTTCTCAATAAGATCAATAATTATCAAATATCATTTTGTTGATTTTTTTAAAAAAATATAATTTGTGTTGGATCCCAACCCATAATTATTAATGAAAACCAAAATGTATAAAATTAAAAAAAAAAAAAAAAGTTTAATCCCTAAATTTTGAGGATTATGTCAATTTGATCTCTAAACTTTTAAAATTGTCAAATAGATTTTTGAACTTTCAATTTTGTGTCAAATAGACCCTCGAACTTTAGAAATTATCCAATAAGTCTTTAAACTTTCACTTTTTCTAACTTTTACTATTGTATCCAATAAATACTTAACATATTCAACATTTTTTAAAATTCACGCAATACTAGAAGTTTAGAATCTCAATAGACATAAAATTCAATTAAATATCTAATACATTGGTTAATTTTTAAAAATCTCATTAGGCACAAAATTGAAGGTTTAGATATCTATTAGACATTTTTAAAGTTCAAAGACCACCATACGAAGAACACAGGATAAACGAGGCATCATCTATGATTATAAAAGGAAGTTGTTATCAACTCGATAAACCACACTTTTAAATGAAAAGAAGGCCATAAGCCTGTGATTAAGACTATCTAATAGCAAATTAAAATGTTCATATTTAATTCCCTTCTAAGTCTCTTATCTACAGTTAAATTACAAGTTTAGTCCCTCAATTTTGAAATTTATATCTATTTATTCTCTAAACTTTTAAAATTGTCTAACAAGTTTCCAAACTTTCAATTTAGAATATAATAGATCTCTACAAATTTTTAATTTTATGTTTAATGAAACCTAACATTTTAATCTTGCGTCGAATAAATTTATGAATTTTAAAAATTCAAATGTTTAGAATTAAAGCCCCGTTTGATAACTATTTCGTTTTTTGTTTTTTATTTTTGAAAATGAAGATTATAAATACTACTTTCACCCACAATTTTCTTTGTTTTGTTATCTAAATAGTTTTCAAAACATGTTTTTGTTTTTGGAATCTGGTTAAGAACTCAAATGTCTACTTAACAAAATGAAAACTTTGATAAAGAATTGAGAGAAAACAAACATAATTTTCAAAAACCAAATGGTTATCAAACGAGGTGTTGAGAATTTGATATCTCCAGCTTGATAATGTGTGCCTCTCACGAGCCACTTATTCTTCTTAGCCTTATAAAATCTCAAGGTCATCCTCTCTCTGAGATAAGAGAAAAACAGAGCTTTGTATTTCCTCCTTGTAAAAAGAGAGAGTTTGTATATCCCGTTGCTTTCCTTCAAGATTCAATAAAATTGTCCCTGGTGCTTCTAAGTGGAACCACTATAATCCCTTGTGTTTCTTTCTCCTCTCTCTCCCTTGTCTTTAGCTTTGATTGCTCTGTTTCTAAAAGACTATTTTGATTACTTCCGCAATTTGTAAACTTGAACTTCTGGGAGAAGTTGGTCTTGAATTTCACACGAGGCCTAAATTTTTAATTTTTAAAGTTACTGTTCACACGTAACTTCGGGATGGAGACACGTGGAATAAATAATATATTTGTATTGATGTTGTATGCGTGTGGGTGTACAATCTCTAACTTTAATCCTCTGATTCTCTCTCTTATGTGTGTGGGTGTGTTTCACTCGAGGGCTGAACGCTTGATCTCGAGTCTGAAGCTTCAATGGATTCTTGGAGCTTGAAGTCTTCCAGTCTTGAAGGAGTCTTCAATCTTCAAGAAGTGTTGATGTCCTGAAGAGTCTTTGATCTTCAAGGAGTGTTGAAGTCTTGAAGGATGTTTGGTCTTCAAGGAGTGTTGAAGTCTTGAAGAGTGTTTGGTCTTCAAGAAGTGTTCAACACTTGGACTTGTGGATTGCAGAGAGTCTTCGGTCTTTAGACTTGGTGGAGTCTCTCTGA

mRNA sequence

ATGGTGGCCGGAAAAGTCATCGGCGACCGCCGGAAAAGTCGTCGACGGTCGTCGGAAAATTCGTCAGAAACTTCGCCGGCTGACGGCGGCCGACGGTCATCGGAAAAGTCAAGGAGTCGCATATGGAAGAATCGGTCAAGAGCAAGAGGGAAGATGAAAGTTGTGAACTCGACAACCCTGCTCATTATGGGAATAGCCAAGAGGGCCACAGTAAAGTTGGTATCAGAGCCTAGTTGGTTCCTAAAGTTGAAATCTGAAAGCATGTCGTCAACCAGGCAATTGGCAAAGACCCACGTGGAACATTTGGTAGAGATTGAAGAACAGTTGCTCTACTTGAGGGAAGTATCTGATGCTCTTTGGTTCTTGGAATCTCGATTGGAAGAGATTTCAACCAAGGTCGACAACATTGATGCGGTAGCTGGCCGCGTGAGTGTTGAAGTCTTGAAGGATGTTTGGTCTTCAAGGAGTGTTGAAGTCTTGAAGAGTGTTTGGTCTTCAAGAAGTGTTCAACACTTGGACTTGTGGATTGCAGAGAGTCTTCGGTCTTTAGACTTGGTGGAGTCTCTCTGA

Coding sequence (CDS)

ATGGTGGCCGGAAAAGTCATCGGCGACCGCCGGAAAAGTCGTCGACGGTCGTCGGAAAATTCGTCAGAAACTTCGCCGGCTGACGGCGGCCGACGGTCATCGGAAAAGTCAAGGAGTCGCATATGGAAGAATCGGTCAAGAGCAAGAGGGAAGATGAAAGTTGTGAACTCGACAACCCTGCTCATTATGGGAATAGCCAAGAGGGCCACAGTAAAGTTGGTATCAGAGCCTAGTTGGTTCCTAAAGTTGAAATCTGAAAGCATGTCGTCAACCAGGCAATTGGCAAAGACCCACGTGGAACATTTGGTAGAGATTGAAGAACAGTTGCTCTACTTGAGGGAAGTATCTGATGCTCTTTGGTTCTTGGAATCTCGATTGGAAGAGATTTCAACCAAGGTCGACAACATTGATGCGGTAGCTGGCCGCGTGAGTGTTGAAGTCTTGAAGGATGTTTGGTCTTCAAGGAGTGTTGAAGTCTTGAAGAGTGTTTGGTCTTCAAGAAGTGTTCAACACTTGGACTTGTGGATTGCAGAGAGTCTTCGGTCTTTAGACTTGGTGGAGTCTCTCTGA

Protein sequence

MVAGKVIGDRRKSRRRSSENSSETSPADGGRRSSEKSRSRIWKNRSRARGKMKVVNSTTLLIMGIAKRATVKLVSEPSWFLKLKSESMSSTRQLAKTHVEHLVEIEEQLLYLREVSDALWFLESRLEEISTKVDNIDAVAGRVSVEVLKDVWSSRSVEVLKSVWSSRSVQHLDLWIAESLRSLDLVESL

Homology

[Close]

BLAST of Lag0021874 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 72.4 bits (176), Expect = 4.7e-09
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 88  MSSTRQLAKTHVEHLVEIEEQLLYLREVSDALWFLESRLEEISTKVDNIDAVAGRVS--- 147
           MS+T+QL K+H++ LVEIEE+LL+LRE+ D L ++ESRL+EISTK D ID V  R+    
Sbjct: 1   MSTTKQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLA 60

Query: 148 -------VEVLKDVWSSRSVEVLKSVWSSRSVQHLDLWIAE 179
                  VE L+D    R+  + +   SS S+ H++  + E
Sbjct: 61  IRELMLRVETLEDK-VKRTDNLERGESSSSSIAHMEERVEE 100

[Close]

BLAST of Lag0021874 vs. NCBI nr
Match: XP_022154605.1 (uncharacterized protein LOC111021829 [Momordica charantia])

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-08
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 88  MSSTRQLAKTHVEHLVEIEEQLLYLREVSDALWFLESRLEEISTKVDNIDAVAGRVSVEV 147
           MS+T+QL+K+HV+ LVEIEEQLLYLREV D+L  LE+R++E S K   IDAV  RV    
Sbjct: 1   MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60

Query: 148 LKDV 152
           ++D+
Sbjct: 61  IQDI 64

[Close]

BLAST of Lag0021874 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 69.7 bits (169), Expect = 3.0e-08
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 88  MSSTRQLAKTHVEHLVEIEEQLLYLREVSDALWFLESRLEEISTKVDNIDAVAGRVSVEV 147
           MS+T+QL+K+HV+ LVEIEEQLLYLREV D L  LE+R++E S K   IDAV  R+    
Sbjct: 1   MSTTKQLSKSHVDRLVEIEEQLLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLP 60

Query: 148 LKDVWSSRSVEVLKS 163
           ++D+  +  VE L+S
Sbjct: 61  IQDI--AMRVETLES 73

[Close]

BLAST of Lag0021874 vs. NCBI nr
Match: KAA0066694.1 (uncharacterized protein E6C27_scaffold271G00270 [Cucumis melo var. makuwa] >TYK27844.1 uncharacterized protein E5676_scaffold384G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 3.4e-07
Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 88  MSSTRQLAKTHVEHLVEIEEQLLYLREVSDALWFLESRLEEISTKVDNIDAVAGRVSVEV 147
           MSS+    K   + LVE+EEQ+LYL EVSD++ +LESRL+EIS K D IDAVAGRV   V
Sbjct: 1   MSSSNPSGKAQKDRLVELEEQMLYLVEVSDSIRYLESRLDEISEKTDAIDAVAGRVEATV 60

[Close]

BLAST of Lag0021874 vs. NCBI nr
Match: KAA0053377.1 (uncharacterized protein E6C27_scaffold428G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 4.4e-07
Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 88  MSSTRQLAKTHVEHLVEIEEQLLYLREVSDALWFLESRLEEISTKVDNIDAVAG 142
           MS T Q  K   + LVE+EEQ+LYL EV D++ FLESRL+EIS KVD IDAVAG
Sbjct: 1   MSMTNQSDKVQKDRLVELEEQMLYLMEVPDSIHFLESRLKEISKKVDTIDAVAG 54

The following BLAST results are available for this feature:

BLAST of Lag0021874 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155185.1	4.7e-09	43.56	uncharacterized protein LOC111022320 [Momordica charantia]	[more]
XP_022154605.1	2.3e-08	57.81	uncharacterized protein LOC111021829 [Momordica charantia]	[more]
XP_022150099.1	3.0e-08	53.33	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
KAA0066694.1	3.4e-07	60.00	uncharacterized protein E6C27_scaffold271G00270 [Cucumis melo var. makuwa] >TYK2...	[more]
KAA0053377.1	4.4e-07	64.81	uncharacterized protein E6C27_scaffold428G00350 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0021874 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0021874.1	Lag0021874.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003824	catalytic activity