Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACCAGTGTTGTTTCTCAACTTGTTATGGAAGCTAGTCTTGATTCTAATGACAGAGGAAACAGTGGTAATTGGCATAACAATGGTAGAGGACATGGTCGCTTTGATAAAAATCGAAATGGAGGGCGTGGTCGTGGTAATTCCTTCCCTCCTAATTAGTCTTTTTCGTCTCAGGGCCAATTCTCCTCTACTTCGTCTACTCCAAGTCAATTTTCCAGCAGAGTCCATTGTCAGATCTGTAAAAAATATGGCCACAACACTCTTGACTGCTACAACCACATGAATTACTCTTATCAAGGACGTCATCCACCTGCGAAACTCGTTGCCATGGCCGCTAATGCTTCATCTTCTACAACCAGATCTTCTTCTGGTTCTTTTCCACAGGAGTCACACGTTTGGCTTTCTGATATAGGGTGTAATGCTCATTTAACTAATGACATGGTGAATCTCAGTGTTTCTAATGCATATAATGGTGAGGAAAACATCACGGTTGGTAATGGCCAGTCTCTTTCCATCTCTCATTCTGGTTCTGGCCATATCTTTTTGTCTGATAACTCTTTTACTCTTAATAATCTCTTTCTTGTTTCCAATATTGCTACCAATCTTTTATCCGTTCATCAATTTTGCATTGATAATAACTGTTGTTTCATATTTGACTCATCATCATTTACTATTCAGGACAGAGCATCGAACAAAGTCCTATTCCACGAACCTAGTATTAATGGTTTGTATCCTCTTTCCATGATTCCTATATCTTCAGCACTAGTAAAACTTACAGCTAATGTGGGTGCCAAGGTTTTATCATCTGTGTGGCATGGCCGGTTAGGCCATCCCTCATTTCCTATTCTCCAATCTGTTTTGAATTCATCTAGTATCTCTGTTTCATGTTCTGGAAAATACATGTGTACACACTGTCTTGATGGCAAGATGTCAAAGTTGCCTTTTTCTTTGTCTAATTCGGTTTCAAATGTTCCTCTTGAACTTGTACATAACGATGTATGGGGCCCTGCCCTTGAAAATTCAACAAATGGTCATTGA
mRNA sequence
ATGATACCAGTGTTGTTTCTCAACTTGTTATGGAAGCTAGTCTTGATTCTAATGACAGAGGAAACAGTGGGCCAATTCTCCTCTACTTCGTCTACTCCAAGTCAATTTTCCAGCAGAGTCCATTGTCAGATCTGTAAAAAATATGGCCACAACACTCTTGACTGCTACAACCACATGAATTACTCTTATCAAGGACGTCATCCACCTGCGAAACTCGTTGCCATGGCCGCTAATGCTTCATCTTCTACAACCAGATCTTCTTCTGGTTCTTTTCCACAGGAGTCACACGTTTGGCTTTCTGATATAGGGTGTAATGCTCATTTAACTAATGACATGGTGAATCTCAGTGTTTCTAATGCATATAATGGTGAGGAAAACATCACGGTTGGTAATGGCCAGTCTCTTTCCATCTCTCATTCTGGTTCTGGCCATATCTTTTTGTCTGATAACTCTTTTACTCTTAATAATCTCTTTCTTGTTTCCAATATTGCTACCAATCTTTTATCCGTTCATCAATTTTGCATTGATAATAACTGTTGTTTCATATTTGACTCATCATCATTTACTATTCAGGACAGAGCATCGAACAAAGTCCTATTCCACGAACCTAGTATTAATGGTTTGTATCCTCTTTCCATGATTCCTATATCTTCAGCACTAGTAAAACTTACAGCTAATGTGGGTGCCAAGGTTTTATCATCTGTGTGGCATGGCCGGTTAGGCCATCCCTCATTTCCTATTCTCCAATCTGTTTTGAATTCATCTAGTATCTCTGTTTCATGTTCTGGAAAATACATGTGTACACACTGTCTTGATGGCAAGATGTCAAAGTTGCCTTTTTCTTTGTCTAATTCGGTTTCAAATGTTCCTCTTGAACTTGTACATAACGATGTATGGGGCCCTGCCCTTGAAAATTCAACAAATGGTCATTGA
Coding sequence (CDS)
ATGATACCAGTGTTGTTTCTCAACTTGTTATGGAAGCTAGTCTTGATTCTAATGACAGAGGAAACAGTGGGCCAATTCTCCTCTACTTCGTCTACTCCAAGTCAATTTTCCAGCAGAGTCCATTGTCAGATCTGTAAAAAATATGGCCACAACACTCTTGACTGCTACAACCACATGAATTACTCTTATCAAGGACGTCATCCACCTGCGAAACTCGTTGCCATGGCCGCTAATGCTTCATCTTCTACAACCAGATCTTCTTCTGGTTCTTTTCCACAGGAGTCACACGTTTGGCTTTCTGATATAGGGTGTAATGCTCATTTAACTAATGACATGGTGAATCTCAGTGTTTCTAATGCATATAATGGTGAGGAAAACATCACGGTTGGTAATGGCCAGTCTCTTTCCATCTCTCATTCTGGTTCTGGCCATATCTTTTTGTCTGATAACTCTTTTACTCTTAATAATCTCTTTCTTGTTTCCAATATTGCTACCAATCTTTTATCCGTTCATCAATTTTGCATTGATAATAACTGTTGTTTCATATTTGACTCATCATCATTTACTATTCAGGACAGAGCATCGAACAAAGTCCTATTCCACGAACCTAGTATTAATGGTTTGTATCCTCTTTCCATGATTCCTATATCTTCAGCACTAGTAAAACTTACAGCTAATGTGGGTGCCAAGGTTTTATCATCTGTGTGGCATGGCCGGTTAGGCCATCCCTCATTTCCTATTCTCCAATCTGTTTTGAATTCATCTAGTATCTCTGTTTCATGTTCTGGAAAATACATGTGTACACACTGTCTTGATGGCAAGATGTCAAAGTTGCCTTTTTCTTTGTCTAATTCGGTTTCAAATGTTCCTCTTGAACTTGTACATAACGATGTATGGGGCCCTGCCCTTGAAAATTCAACAAATGGTCATTGA
Protein sequence
MIPVLFLNLLWKLVLILMTEETVGQFSSTSSTPSQFSSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSSTTRSSSGSFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISHSGSGHIFLSDNSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVLFHEPSINGLYPLSMIPISSALVKLTANVGAKVLSSVWHGRLGHPSFPILQSVLNSSSISVSCSGKYMCTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALENSTNGH
Homology
BLAST of Lag0021815 vs. NCBI nr
Match:
KAA8524269.1 (hypothetical protein F0562_010692 [Nyssa sinensis])
HSP 1 Score: 241.1 bits (614), Expect = 1.3e-59
Identity = 135/307 (43.97%), Postives = 183/307 (59.61%), Query Frame = 0
Query: 30 SSTPSQFSSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSSTTRSSSG 89
S+ S S V CQIC K GH+ LDCY+ M++SYQG+ P +L AM+A ++ + S
Sbjct: 328 SNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMSATYNTGSDCS--- 387
Query: 90 SFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISHSGSGHIFLSD 149
+ W +D G H+T D+ NL+ Y G++NIT+ NGQ+L ISHSG I +D
Sbjct: 388 -----PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSSIHAND 447
Query: 150 NSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVLFHEPSINGLY 209
++F LNN+ V ++ATNLLSVHQFC DN+C FIFDS F IQD+A+ ++LF PS +GLY
Sbjct: 448 HTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQLLFQGPSDHGLY 507
Query: 210 PLSMIPIS-----------------------SALVK-------LTANVGAKVLSSVWHGR 269
PL I+ S L + TA +G +V + +WH R
Sbjct: 508 PLPTSSITKHSAPSLQPPLHFQHYNKHCANHSPLQRNNYSDSPHTAYLGKQVSTVLWHDR 567
Query: 270 LGHPSFPILQSVLNSSSISVSCSGKYMCTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVW 307
LGHPS LQS+L+S+SI+ +C HCL GKM+KLPF LS + S PL+LVH+D+W
Sbjct: 568 LGHPSTATLQSILSSASITAPRDSAPLCQHCLIGKMTKLPFPLSTTESTAPLQLVHSDLW 626
BLAST of Lag0021815 vs. NCBI nr
Match:
RWR76373.1 (putative polyprotein [Cinnamomum micranthum f. kanehirae])
HSP 1 Score: 234.2 bits (596), Expect = 1.5e-57
Identity = 126/276 (45.65%), Postives = 175/276 (63.41%), Query Frame = 0
Query: 39 RVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSSTTRSSSGSFPQESHVW 98
RV CQIC + GH+ LDCY+ M+++YQG HPP KL AMAA S F E + W
Sbjct: 410 RVPCQICNRTGHSALDCYHRMDFTYQGSHPPNKLAAMAA----------SNQFSVEQN-W 469
Query: 99 LSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISHSGSGHIFLSDNSFTLNNLF 158
+D G H+T+++ NLS+ + Y+ + ++VGNG L ISH GS I ++F LNN+
Sbjct: 470 YTDTGATDHITSNIGNLSLRSDYHRPDKVSVGNGAGLHISHIGSNSISTPSSNFRLNNML 529
Query: 159 LVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVLFHEPSINGLY--PLSMIPI 218
V +I+TNL+SVH+F DNNC FIFDSS F I+D+AS K LF S NGLY P+ +P
Sbjct: 530 CVPHISTNLISVHRFANDNNCFFIFDSSGFCIKDKASGKTLFRGQSKNGLYPFPIRRLPT 589
Query: 219 SSALVKLTANVGAKVLSSVWHGRLGHPSFPILQSVLNSSSISVSCSGKY--MCTHCLDGK 278
S A VG +V +S+WH RLGHP+ + Q + ++ + V S K +CT C GK
Sbjct: 590 HSNNDGHAAFVGERVTASIWHSRLGHPASAVFQHLASAFQLPVDGSSKLSSICTPCQMGK 649
Query: 279 MSKLPFSLSNSVSNVPLELVHNDVWGPALENSTNGH 311
KLPFS+S+S+S+ PL+L+H D+WG + E S +G+
Sbjct: 650 SKKLPFSISSSISSNPLDLIHCDLWGSSPELSISGY 674
BLAST of Lag0021815 vs. NCBI nr
Match:
KAF8394586.1 (hypothetical protein HHK36_020800 [Tetracentron sinense])
HSP 1 Score: 214.2 bits (544), Expect = 1.6e-51
Identity = 120/288 (41.67%), Postives = 166/288 (57.64%), Query Frame = 0
Query: 24 GQFSSTSSTPSQFSSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSST 83
G+ + +++ ++ S+ CQIC + GH+ LDC++ ++ S+QGR PP KL AMAA ST
Sbjct: 111 GRANPSNNHSTKPSNAPSCQICNRVGHSALDCFHRLDLSFQGRQPPPKLQAMAAMRQDST 170
Query: 84 TRSSSGSFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISHSGSG 143
W +D G H+T D+ NLS+ + Y G +N+TVGNG+ L I H GS
Sbjct: 171 --------------WFTDTGATNHVTADLNNLSLHSDYEGSDNLTVGNGKGLHIEHIGST 230
Query: 144 HIFLSDNSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVLFHEP 203
+ ++F + ++ V I NLLSV QF DN+C F+F SS F+++D S K+LF
Sbjct: 231 SYSSNGSTFHMQDILHVPCITKNLLSVSQFSKDNDCHFVFTSSGFSVKDNKSGKILFQGR 290
Query: 204 SINGLYPLSMIP--ISSALVKLTANVGAKVLSSVWHGRLGHPSFPILQSVLNSSSISVSC 263
S GLYPL P + +A + V SSVWH RLGHPS LQ V + S
Sbjct: 291 SSKGLYPLHFQPHDKNKPYSSPSAFTSSTVSSSVWHHRLGHPSHQTLQQVAPHIHLGRSS 350
Query: 264 SGKYMCTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALENSTNG 310
+ +C+ C GK S+LPF LS+S+S PLELVH DVWGP+ S NG
Sbjct: 351 QHQTICSSCQMGKSSRLPFQLSDSISQYPLELVHTDVWGPSSITSING 384
BLAST of Lag0021815 vs. NCBI nr
Match:
KAF8407394.1 (hypothetical protein HHK36_006525 [Tetracentron sinense])
HSP 1 Score: 214.2 bits (544), Expect = 1.6e-51
Identity = 113/269 (42.01%), Postives = 168/269 (62.45%), Query Frame = 0
Query: 42 CQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSSTTRSSSGSFPQESHVWLSD 101
CQIC + GHN LDC++ ++ SYQGR PP KL AM A+ +S+T W +D
Sbjct: 69 CQICNRVGHNALDCFHRLDLSYQGRQPPQKLQAMVASKQASST-------------WYTD 128
Query: 102 IGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISHSGSGHIFLSDNSFTLNNLFLVS 161
H+T D+ NLS+ + Y+G +++ + NG++L ISH G+ + ++N F L+++ V
Sbjct: 129 TRATNHVTADLSNLSLHSEYDGPDSVAIANGKTLPISHVGTTKLSHNNNLFHLDHILHVP 188
Query: 162 NIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVLFHEPSINGLYPLSMIPISSALV 221
++ TNL+SV QF DNNC FIF S F ++D ++ + LF +G+YP+ +P+S++
Sbjct: 189 HMKTNLISVSQFTKDNNCHFIFTDSDFFVKDNSTGRTLFQGRIRDGIYPI-QLPLSASHS 248
Query: 222 KLTANVGAKVLSSVWHGRLGHPSFPILQSVLNSSSISVSCSGKYMCTHCLDGKMSKLPFS 281
N ++ SS+WH RLGH + PI+ S+ S+S S +C+ C GK S+LPFS
Sbjct: 249 PSAFNT-VRLSSSIWHHRLGHLAPPIMASLSKELSLSGSSKLSSICSSCQMGKSSRLPFS 308
Query: 282 LSNSVSNVPLELVHNDVWGPALENSTNGH 311
+S SV+N PLELVH DVWGP LE S NG+
Sbjct: 309 MSESVTNFPLELVHTDVWGPTLELSINGY 322
BLAST of Lag0021815 vs. NCBI nr
Match:
BBG97282.1 (hypothetical protein Prudu_006352 [Prunus dulcis])
HSP 1 Score: 211.1 bits (536), Expect = 1.4e-50
Identity = 124/296 (41.89%), Postives = 168/296 (56.76%), Query Frame = 0
Query: 31 STPSQFSSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSSTTRSSSGS 90
ST SQ SS + CQIC K GH LDCY+ NY+YQG PP+ L AMAA AS S
Sbjct: 321 STSSQGSSVIECQICGKKGHGALDCYHRSNYAYQGSPPPSSLTAMAAQASFS-------- 380
Query: 91 FPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISHSGSGHIFLSDN 150
VW++D G + H+ M + EN+ VGNG+ L I+H G HI +
Sbjct: 381 ---PDAVWIADSGASHHMVPHMTTMHNVTPCTSAENVVVGNGEGLHIAHIGKSHIPTVSS 440
Query: 151 SFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVLFHEPSINGLYP 210
S TL+ + V + NLLSV+Q C DNNC IFD+S F IQD+ +NK L S +GLYP
Sbjct: 441 SLTLSKVLHVPQLTANLLSVYQLCHDNNCRMIFDTSGFLIQDKVTNKKLLQGKSEHGLYP 500
Query: 211 ----LSMIPISSALVKL-----------TANVGAKVLSSVWHGRLGHPSFPILQSVLNSS 270
LS I S+ + +A +G KV SS+WH RLGHP+ ++Q +L ++
Sbjct: 501 VPTSLSSIGTGSSSSSVGTSSRASQSQTSAFLGQKVRSSLWHSRLGHPTNEVVQLMLTAA 560
Query: 271 SIS-VSCSGKYMCTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALENSTNGH 311
I VS S +C+ CLDGKM +LPFS ++ ++ P +H+DVWGP+ S +G+
Sbjct: 561 QIPVVSDSISKLCSFCLDGKMHRLPFSSHHNKASSPFYRLHSDVWGPSPCKSISGY 605
BLAST of Lag0021815 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32
Identity = 99/291 (34.02%), Postives = 150/291 (51.55%), Query Frame = 0
Query: 25 QFSSTSSTPSQFSSRVH---CQICKKYGHNTLDC--YNHMNYSYQGRHPPAKLVAMAANA 84
Q SST+ P+ S+ + CQIC GH+ C H S + PP+ A
Sbjct: 259 QQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRA 318
Query: 85 SSSTTRSSSGSFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISH 144
+ + GS P S+ WL D G H+T+D NLS+ Y G +++ V +G ++ ISH
Sbjct: 319 NLAL-----GS-PYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISH 378
Query: 145 SGSGHIFLSDNSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVL 204
+GS + L+N+ V NI NL+SV++ C N F +SF ++D + L
Sbjct: 379 TGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPL 438
Query: 205 FHEPSINGLYPLSMIPISSALVKLTANVGAKVLSSVWHGRLGHPSFPILQSVLNSSSISV 264
+ + LY + SS V L A+ +K S WH RLGHP+ IL SV+++ S+SV
Sbjct: 439 LQGKTKDELYEWPI--ASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV 498
Query: 265 -SCSGKYM-CTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALENSTN 309
+ S K++ C+ CL K +K+PFS S S PLE +++DVW + + N
Sbjct: 499 LNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDN 541
BLAST of Lag0021815 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 2.7e-28
Identity = 90/291 (30.93%), Postives = 139/291 (47.77%), Query Frame = 0
Query: 28 STSSTPSQFSSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSSTT--- 87
S + P + R CQIC GH+ C P N ST+
Sbjct: 246 SDNRQPKPYLGR--CQICSVQGHSAKRC------------PQLHQFQSTTNQQQSTSPFT 305
Query: 88 -----RSSSGSFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISH 147
+ + + P ++ WL D G H+T+D NLS Y G +++ + +G ++ I+H
Sbjct: 306 PWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITH 365
Query: 148 SGSGHIFLSDNSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVL 207
+GS + S S LN + V NI NL+SV++ C N F +SF ++D + L
Sbjct: 366 TGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPL 425
Query: 208 FHEPSINGLYPLSMIPISSALVKLTANVGAKVLSSVWHGRLGHPSFPILQSVLNSSSISV 267
+ + LY + SS V + A+ +K S WH RLGHPS IL SV+++ S+ V
Sbjct: 426 LQGKTKDELYEWPI--ASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPV 485
Query: 268 -SCSGKYM-CTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALENSTN 309
+ S K + C+ C K K+PFS S S+ PLE +++DVW + + N
Sbjct: 486 LNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDN 520
BLAST of Lag0021815 vs. ExPASy TrEMBL
Match:
A0A2N9I8F3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48235 PE=3 SV=1)
HSP 1 Score: 247.7 bits (631), Expect = 6.5e-62
Identity = 140/301 (46.51%), Postives = 182/301 (60.47%), Query Frame = 0
Query: 25 QFSSTSSTPSQF-----SSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANA 84
QFS ++ SQF SR CQIC K GH LDCY+ M+++YQGRHPPAKL AMA+ +
Sbjct: 257 QFSQSAQGNSQFPQKPEGSRPQCQICGKLGHQALDCYHRMDFAYQGRHPPAKLAAMASTS 316
Query: 85 SSSTTRSSSGSFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISH 144
+ S Q WL+D G HLT ++ NL + Y G E ++VGNGQS+ I+H
Sbjct: 317 NGS----------QGGDTWLTDTGATDHLTANLTNLQTAAPYQGTEQVSVGNGQSIPINH 376
Query: 145 SGSGHIFLSDNSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVL 204
G+G + + +F L NL S I++NLLSVH C DNNC FDS+ F IQD S KVL
Sbjct: 377 IGNGQLSTKNYNFRLKNLLHSSRISSNLLSVHTLCKDNNCSCYFDSNKFLIQDLPSGKVL 436
Query: 205 FHEPSINGLYPL-------SMIPISSALVKLTANVGAKVLSSVWHGRLGHPSFPILQSVL 264
+ S NGLYP+ SM P ++A ++A + +K +WH RLGHPS +L S +
Sbjct: 437 YKGLSKNGLYPIHTLPSSSSMSPSATASPPVSAFLSSKNKWQLWHHRLGHPSDRVLVSAM 496
Query: 265 NSSSISVSCSGKYM---CTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALENSTNG 311
S S +S S K++ C HCL GKM +LPF S S PLELVH+DVWGPA NS+NG
Sbjct: 497 PSLSSCMSISNKHVQHHCKHCLIGKMHRLPFPHSKFQSTQPLELVHSDVWGPAPVNSSNG 547
BLAST of Lag0021815 vs. ExPASy TrEMBL
Match:
A0A5J5A1U7 (Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_010692 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 6.1e-60
Identity = 135/307 (43.97%), Postives = 183/307 (59.61%), Query Frame = 0
Query: 30 SSTPSQFSSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSSTTRSSSG 89
S+ S S V CQIC K GH+ LDCY+ M++SYQG+ P +L AM+A ++ + S
Sbjct: 328 SNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAMSATYNTGSDCS--- 387
Query: 90 SFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISHSGSGHIFLSD 149
+ W +D G H+T D+ NL+ Y G++NIT+ NGQ+L ISHSG I +D
Sbjct: 388 -----PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDISHSGQSSIHAND 447
Query: 150 NSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVLFHEPSINGLY 209
++F LNN+ V ++ATNLLSVHQFC DN+C FIFDS F IQD+A+ ++LF PS +GLY
Sbjct: 448 HTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQLLFQGPSDHGLY 507
Query: 210 PLSMIPIS-----------------------SALVK-------LTANVGAKVLSSVWHGR 269
PL I+ S L + TA +G +V + +WH R
Sbjct: 508 PLPTSSITKHSAPSLQPPLHFQHYNKHCANHSPLQRNNYSDSPHTAYLGKQVSTVLWHDR 567
Query: 270 LGHPSFPILQSVLNSSSISVSCSGKYMCTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVW 307
LGHPS LQS+L+S+SI+ +C HCL GKM+KLPF LS + S PL+LVH+D+W
Sbjct: 568 LGHPSTATLQSILSSASITAPRDSAPLCQHCLIGKMTKLPFPLSTTESTAPLQLVHSDLW 626
BLAST of Lag0021815 vs. ExPASy TrEMBL
Match:
A0A2N9G2I0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21670 PE=4 SV=1)
HSP 1 Score: 238.0 bits (606), Expect = 5.1e-59
Identity = 136/306 (44.44%), Postives = 180/306 (58.82%), Query Frame = 0
Query: 25 QFSSTSSTPSQ-------------FSSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAK 84
Q+SS S++P+Q SSR CQIC K GH LDCY+ M+++YQGRHPPAK
Sbjct: 177 QYSSQSNSPTQGQSTFSQHSQNKSESSRPQCQICGKLGHQALDCYHRMDFAYQGRHPPAK 236
Query: 85 LVAMAANASSSTTRSSSGSFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGN 144
L AMA+ ++ + Q WL+D G HLT +M NL+V Y G + + VGN
Sbjct: 237 LAAMASTSNGA----------QAGESWLTDTGATDHLTANMNNLNVHTPYKGNDQVAVGN 296
Query: 145 GQSLSISHSGSGHIFLSDNSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQ 204
GQS+ I++ G+G + +F L +L S I++NLLSVH+ C DNNCC FDS+ F IQ
Sbjct: 297 GQSIPINNIGTGQLCTKLYNFRLQSLLHSSKISSNLLSVHKLCKDNNCCCYFDSNKFLIQ 356
Query: 205 DRASNKVLFHEPSINGLYPL----SMIPISSALVKLTANVGAKVLSSVWHGRLGHPSFPI 264
D S KVL+ S NGLYP+ + ++A + A + +K +WH RLGHPS +
Sbjct: 357 DLPSGKVLYKGLSENGLYPIHTTHPSVQTNTASPSVLAFLSSKNKWQLWHHRLGHPSDRV 416
Query: 265 LQSVLNSSSISVSCSGKYM---CTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALE 311
L S L S S +S K++ C HCL GKM KLPF S S PLEL+H+DVWGPA
Sbjct: 417 LVSALPSLSSCISVQNKHVQHHCKHCLIGKMHKLPFEHSKFQSTQPLELIHSDVWGPAPI 472
BLAST of Lag0021815 vs. ExPASy TrEMBL
Match:
A0A2N9G2N5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21313 PE=4 SV=1)
HSP 1 Score: 235.0 bits (598), Expect = 4.4e-58
Identity = 136/306 (44.44%), Postives = 181/306 (59.15%), Query Frame = 0
Query: 25 QFSSTSSTPSQ----FS---------SRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAK 84
Q+SS S++P+Q FS SR CQIC K GH LDCY+ M+++YQGRHPPAK
Sbjct: 299 QYSSQSNSPTQGQSTFSQHSQNKSENSRPQCQICGKLGHQALDCYHRMDFAYQGRHPPAK 358
Query: 85 LVAMAANASSSTTRSSSGSFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGN 144
L AMA+ ++ + Q WL+D G HLT +M NL+V Y G + + VGN
Sbjct: 359 LAAMASTSNGT----------QAGESWLTDTGATDHLTANMSNLNVHTPYKGNDQVAVGN 418
Query: 145 GQSLSISHSGSGHIFLSDNSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQ 204
GQS+ I++ G+G + +F L +L S I++NLLSVH+ C DNNCC FDS+ F IQ
Sbjct: 419 GQSIPINNIGTGQLCTKLYNFRLQSLLHSSKISSNLLSVHKLCKDNNCCCYFDSNKFLIQ 478
Query: 205 DRASNKVLFHEPSINGLYPL----SMIPISSALVKLTANVGAKVLSSVWHGRLGHPSFPI 264
D S KVL+ S NGLYP+ + ++A ++A + +K +WH RLGHPS +
Sbjct: 479 DLPSGKVLYKGLSENGLYPIHTTHPSVQTNTASPSVSAFLSSKNKWQLWHHRLGHPSDRV 538
Query: 265 LQSVLNSSSISVSCSGKYM---CTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALE 311
L S L S S +S K++ C HCL GKM KLPF S S PLEL+ +DVWGPA
Sbjct: 539 LVSALPSLSSCISVQNKHVQHHCKHCLIGKMHKLPFEHSKFQSTQPLELIDSDVWGPAPI 594
BLAST of Lag0021815 vs. ExPASy TrEMBL
Match:
A0A2N9FUJ5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18717 PE=4 SV=1)
HSP 1 Score: 235.0 bits (598), Expect = 4.4e-58
Identity = 134/296 (45.27%), Postives = 178/296 (60.14%), Query Frame = 0
Query: 25 QFSSTSSTPSQFSSRVHCQICKKYGHNTLDCYNHMNYSYQGRHPPAKLVAMAANASSSTT 84
QFS S+ SR CQIC K GH LDCY+ M+++YQGRHPPAKL AMA+ +++S T
Sbjct: 313 QFSQNFQGKSE-GSRPMCQICGKVGHQALDCYHRMDFAYQGRHPPAKLAAMASTSNASQT 372
Query: 85 RSSSGSFPQESHVWLSDIGCNAHLTNDMVNLSVSNAYNGEENITVGNGQSLSISHSGSGH 144
Q WL+D G HLT+++ NL+ Y G + + VGNGQS+ I++ G+G
Sbjct: 373 --------QAGETWLTDTGATDHLTSNLGNLTGQTPYQGHDQVAVGNGQSIPINNVGTGQ 432
Query: 145 IFLSDNSFTLNNLFLVSNIATNLLSVHQFCIDNNCCFIFDSSSFTIQDRASNKVLFHEPS 204
+ +F L+NL I++NLLSVH+ C NNC FDS+ F IQD S KVL+ S
Sbjct: 433 LSTQFYNFRLHNLLHSPKISSNLLSVHKLCKHNNCSCYFDSNKFLIQDLPSGKVLYRGLS 492
Query: 205 INGLYPL-------SMIPISSALVKLTANVGAKVLSSVWHGRLGHPSFPILQSVLNSSSI 264
NGLYP+ S+ P S A + A + ++ +WH RLGHPS +L S + S S
Sbjct: 493 ENGLYPIHTQPSVPSVSPSSFASSSIQAFLSSRNKWQLWHQRLGHPSDRVLISAIPSLSS 552
Query: 265 SVSCSGKYM---CTHCLDGKMSKLPFSLSNSVSNVPLELVHNDVWGPALENSTNGH 311
+S + K++ C HCL GKM KLPF S S PLELVH+DVWGPA NS+NG+
Sbjct: 553 CISVNNKHVQHHCKHCLIGKMHKLPFVPSQFQSTHPLELVHSDVWGPAPINSSNGY 599
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA8524269.1 | 1.3e-59 | 43.97 | hypothetical protein F0562_010692 [Nyssa sinensis] | [more] |
RWR76373.1 | 1.5e-57 | 45.65 | putative polyprotein [Cinnamomum micranthum f. kanehirae] | [more] |
KAF8394586.1 | 1.6e-51 | 41.67 | hypothetical protein HHK36_020800 [Tetracentron sinense] | [more] |
KAF8407394.1 | 1.6e-51 | 42.01 | hypothetical protein HHK36_006525 [Tetracentron sinense] | [more] |
BBG97282.1 | 1.4e-50 | 41.89 | hypothetical protein Prudu_006352 [Prunus dulcis] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 2.3e-32 | 34.02 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.7e-28 | 30.93 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A2N9I8F3 | 6.5e-62 | 46.51 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48235 PE=3 SV=1 | [more] |
A0A5J5A1U7 | 6.1e-60 | 43.97 | Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05... | [more] |
A0A2N9G2I0 | 5.1e-59 | 44.44 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21670 PE=4 SV=1 | [more] |
A0A2N9G2N5 | 4.4e-58 | 44.44 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21313 PE=4 SV=1 | [more] |
A0A2N9FUJ5 | 4.4e-58 | 45.27 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18717 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |