Lag0021799 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0021799
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ulp1-like peptidase
Location	chr7: 12295651 .. 12296707 (+)
RNA-Seq Expression	Lag0021799
Synteny	Lag0021799

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGTTTCGATTCCCATTCACTTTCTAGTTGGGTTCTTAACCAATTCTTTATTGCATGTTGTTTCTTTGGTACGTTGGAGTTGGATTTAGTCATATGGCTTTGACGCTTTCAGTGGGTTTTCGGTTTAGCAATTTAGGACTAGAAATTTTACAAAAGTTGCTTCGTTCTTCTATGATGTGTAATGTGATGAACTGGTTGCATGAGGAAGTTGGGTTTGTCAAGTAGCTGTAGAGCGAGAAACGAGAACTAGGACAGAGAGCGAGAATCGAGATCTTGACAGAATCTTGCATGTATTCAATTTTGTCCTACATTTTTTCCCCTTGATTATCTGTGATACTTACAACAATTGTTGCATACCTGTAGGATTCAAATGACACATGTTCTAAAGATTGTTGAAGAATCCTACCTGTTCTAAAGATTGTTGAGGTCGATCGCTTTCCTGCCTAAGTGACTTGCCTATCTCATATTGGGAATGCCAACAAGACCGTCAAGGCCACTTTGAACAGCAGACAACTCAACTAGTTCAAGAGGACTATTTTTTGCCAGATCGTTGACATGGATTTGGTGTTCAATAGACTTCTGGTGCATCACATCATACTGATGGAGGTTTGATCAGATTGAGTAGATGCCATGAGTTTTGACATCAAGGGGACGGTTGTGACCTTTTCCAAGACGGAGTTCCTACTGGTGACTGGATTGAGGAGACCCTTGTTCCTCGAGTTCTTTGGGATGATGAGCCATTTATGGAGTTGGAGAGGAAATATTTTGGCGACAACAACTTGTCAGCCACACCCCGACTGGACAAATTGGAGGAGAAGTACAAGGAGCTTCAATTTGAGACAAACGATGCAGTGAGGGTCACCTTGGTGTATTACACCAAGATGGCAATGATGGGGAAGAACAAGCAGAAGTGTTGTGTGGATAGAACACTCTTCGATGACATTGAAGACCTGAAATATTATAACAACATGGACTGGGGTAATATCATATGGGAGCGAACACTGAAGGACCTTCGAGCTGCCTTGAAGGACAAGGCCAATGCTTATAAGTAG

mRNA sequence

ATGCTCTGTTTCGATTCCCATTCACTTTCTAGTTGGGTTCTTAACCAATTCTTTATTGCATGTTGTTTCTTTGGGGACGGTTGTGACCTTTTCCAAGACGGAGTTCCTACTGGTGACTGGATTGAGGAGACCCTTGTTCCTCGAGTTCTTTGGGATGATGAGCCATTTATGGAGTTGGAGAGGAAATATTTTGGCGACAACAACTTGTCAGCCACACCCCGACTGGACAAATTGGAGGAGAAGTACAAGGAGCTTCAATTTGAGACAAACGATGCAGTGAGGGTCACCTTGGTGTATTACACCAAGATGGCAATGATGGGGAAGAACAAGCAGAAGTGTTGTGTGGATAGAACACTCTTCGATGACATTGAAGACCTGAAATATTATAACAACATGGACTGGGGTAATATCATATGGGAGCGAACACTGAAGGACCTTCGAGCTGCCTTGAAGGACAAGGCCAATGCTTATAAGTAG

Coding sequence (CDS)

ATGCTCTGTTTCGATTCCCATTCACTTTCTAGTTGGGTTCTTAACCAATTCTTTATTGCATGTTGTTTCTTTGGGGACGGTTGTGACCTTTTCCAAGACGGAGTTCCTACTGGTGACTGGATTGAGGAGACCCTTGTTCCTCGAGTTCTTTGGGATGATGAGCCATTTATGGAGTTGGAGAGGAAATATTTTGGCGACAACAACTTGTCAGCCACACCCCGACTGGACAAATTGGAGGAGAAGTACAAGGAGCTTCAATTTGAGACAAACGATGCAGTGAGGGTCACCTTGGTGTATTACACCAAGATGGCAATGATGGGGAAGAACAAGCAGAAGTGTTGTGTGGATAGAACACTCTTCGATGACATTGAAGACCTGAAATATTATAACAACATGGACTGGGGTAATATCATATGGGAGCGAACACTGAAGGACCTTCGAGCTGCCTTGAAGGACAAGGCCAATGCTTATAAGTAG

Protein sequence

MLCFDSHSLSSWVLNQFFIACCFFGDGCDLFQDGVPTGDWIEETLVPRVLWDDEPFMELERKYFGDNNLSATPRLDKLEEKYKELQFETNDAVRVTLVYYTKMAMMGKNKQKCCVDRTLFDDIEDLKYYNNMDWGNIIWERTLKDLRAALKDKANAYK

Homology

[Close]

BLAST of Lag0021799 vs. NCBI nr
Match: XP_038888550.1 (uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida])

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 71/123 (57.72%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 37  TGDWIEETLVPRVLWDDEPFMELERKYFGDNNLSATPRLDKLEEKYKELQFET-NDAVRV 96
           TG W   T V R    +E   EL  KYFG    S T  L  LEE+YKEL FE  +DAV++
Sbjct: 98  TGLWRSLTRVGR---SEESSHELFTKYFGSRLASDTFHLHLLEEEYKELVFENDDDAVKI 157

Query: 97  TLVYYTKMAMMGKNKQKCCVDRTLFDDIEDLKYYNNMDWGNIIWERTLKDLRAALKDKAN 156
           TLVYYT++AMM KNKQK  VDRTLFDD+ED+ YYN++DWG IIW+RT   L+ ALKDK  
Sbjct: 158 TLVYYTEVAMMSKNKQKNVVDRTLFDDVEDIDYYNSLDWGTIIWQRTPDSLKIALKDKVG 217

Query: 157 AYK 159
            YK
Sbjct: 218 LYK 217

[Close]

BLAST of Lag0021799 vs. NCBI nr
Match: XP_038891634.1 (uncharacterized protein LOC120081026 [Benincasa hispida])

HSP 1 Score: 131.7 bits (330), Expect = 5.5e-27
Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 37  TGDWIEETLVPRVLWDDEPFMELERKYFGDNNLSATPRLDKLEEKYKELQFET-NDAVRV 96
           TG W   T V R    ++   EL  +YFG+ ++     L+ LEE+YK+L FE  NDAV++
Sbjct: 58  TGLWRFPTQVVR---SEKSSQELFTRYFGNRSILDAFHLNLLEEEYKKLVFENDNDAVKI 117

Query: 97  TLVYYTKMAMMGKNKQKCCVDRTLFDDIEDLKYYNNMDWGNIIWERTLKDLRAALKDKAN 156
           TLVYYT++AM+GKNKQK  VD TLFDD+ED+ YYNN+DWG IIW+RTL  L+ AL DK  
Sbjct: 118 TLVYYTEVAMIGKNKQKNVVDGTLFDDVEDIDYYNNLDWGTIIWQRTLDALKTALDDKVG 177

Query: 157 AYK 159
            YK
Sbjct: 178 LYK 177

[Close]

BLAST of Lag0021799 vs. NCBI nr
Match: XP_038885931.1 (uncharacterized protein LOC120076239 [Benincasa hispida])

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-26
Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 37  TGDWIEETLVPRVLWDDEPFMELERKYFGDNNLSATPRLDKLEEKYKELQFET-NDAVRV 96
           TG W   T   RV+  +E   EL  +YFG+ + S T  L+ LEE+YK L FE  +D V++
Sbjct: 34  TGLWRSPT---RVVRSEESSQELATRYFGNQSTSNTFHLNLLEEEYKNLVFENDDDVVKI 93

Query: 97  TLVYYTKMAMMGKNKQKCCVDRTLFDDIEDLKYYNNMDWGNIIWERTLKDLRAALKDKAN 156
           TL+YYTK+AMMGKNKQK   DRTLF+D+ED+ YYNN++W  IIW+RTL  L+ A  DK  
Sbjct: 94  TLIYYTKVAMMGKNKQKSVDDRTLFEDVEDIDYYNNLNWDTIIWQRTLDALKTAPNDKVG 153

Query: 157 AYK 159
            YK
Sbjct: 154 LYK 153

[Close]

BLAST of Lag0021799 vs. NCBI nr
Match: XP_038875066.1 (uncharacterized protein LOC120067593 [Benincasa hispida])

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-26
Identity = 65/123 (52.85%), Postives = 83/123 (67.48%), Query Frame = 0


Query: 37  TGDWIEETLVPRVLWDDEPFMELERKYFGDNNLSATPRLDKLEEKYKELQFET-NDAVRV 96
           TG W   TLV R    +E   EL  +YFG+   S T   + L+E+YK L FE  +D V++
Sbjct: 98  TGLWQSPTLVVR---SEESSQELATRYFGNRLTSDTFHPNLLKEEYKNLVFENDDDVVKI 157

Query: 97  TLVYYTKMAMMGKNKQKCCVDRTLFDDIEDLKYYNNMDWGNIIWERTLKDLRAALKDKAN 156
           TLVYYT++AMMGKNKQK  VDRTLF+D+ED+ YYN++DWG IIW+RT   L+  L DK  
Sbjct: 158 TLVYYTEIAMMGKNKQKSVVDRTLFEDVEDIYYYNSLDWGTIIWQRTFDALKITLNDKVG 217

Query: 157 AYK 159
            YK
Sbjct: 218 LYK 217

[Close]

BLAST of Lag0021799 vs. NCBI nr
Match: XP_038902177.1 (uncharacterized protein LOC120088810 [Benincasa hispida])

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-25
Identity = 63/123 (51.22%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 37  TGDWIEETLVPRVLWDDEPFMELERKYFGDNNLSATPRLDKLEEKYKELQFET-NDAVRV 96
           TG W   T V R   + +   EL  KYFG+     T  L +LEEKYK+L+FE  +D V++
Sbjct: 58  TGLWQSPTRVDR---NQQSSYELAIKYFGNRVTKDTSHLRQLEEKYKDLEFENDDDVVKI 117

Query: 97  TLVYYTKMAMMGKNKQKCCVDRTLFDDIEDLKYYNNMDWGNIIWERTLKDLRAALKDKAN 156
           +LVYYT++AMMGKNKQK  ++   F D+++LKYYN++DWG IIWERTL  L+ AL DK++
Sbjct: 118 SLVYYTEVAMMGKNKQKDAINLKRFKDVQNLKYYNSLDWGTIIWERTLDALKIALNDKSS 177

Query: 157 AYK 159
            YK
Sbjct: 178 LYK 177

The following BLAST results are available for this feature:

BLAST of Lag0021799 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888550.1	1.1e-27	57.72	uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida]	[more]
XP_038891634.1	5.5e-27	54.47	uncharacterized protein LOC120081026 [Benincasa hispida]	[more]
XP_038885931.1	2.1e-26	52.85	uncharacterized protein LOC120076239 [Benincasa hispida]	[more]
XP_038875066.1	3.5e-26	52.85	uncharacterized protein LOC120067593 [Benincasa hispida]	[more]
XP_038902177.1	3.0e-25	51.22	uncharacterized protein LOC120088810 [Benincasa hispida]	[more]

BLAST of Lag0021799 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0021799.1	Lag0021799.1	mRNA