Lag0021769 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021769
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPentatricopeptide repeat
Locationchr7: 11753368 .. 11754159 (-)
RNA-Seq ExpressionLag0021769
SyntenyLag0021769
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACGATAAGGCAACGACTTCCCTTACGCCGTCTTCTACTTCCACCGCAGCTCCAGCTTCTCCACAATCAAATTCCCGCCATTCATTCTCTATTTTCTTCTTCTTCTTCCTCTTCCTCTTCCATTTCCGATTCTCCATCTGCTTCCGTACCCAGCAAAACGAATACGACTCTCACCCAACACGATCTCACCAAGATCAACCTCCTTCTTCCTCGTCTCTGTCTCTACAACCACCACTCCACTGCAATCACACTTCTCGACGCAGCTCTTCTCACTAATCCTCCACTTCAATCTCTTCCCCTTTCAATTCTTTCCCATTCCCTTGCTTCCCAATCTGATTTTTCCCACACAATGTCCCTCCTCACCCGTCTCAAGCACCACCGGAATGCCCTTCTCTATTCGAGCCCTGTTACCACCATGCTCGTTTTCTCTTATTGCAAGCGGCGGAAATCCAGGGAGGCCTTGAAGATTTTCCATTGGATGCTCAGACCAGGCTCGCCATGTAAGCCGGACGAGAGGGTTTACAGAACCCTGATTGCGGGACTGTGTAGGAAGGGGATGGTACTCGATGCTTTGAAGGTTCTCAGGAAAATGGTTGGTTCGAATTTGGTTCCGGATAGCGATCTGAGGAATTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATGATTGGTGAAGCAATGGAGTTAAACGAGACTTTGGATTGCGCTGGCGATCAGAATAGCAGTGACCGTCAGAGAAAGGTGTCGGAATTGTTGGACCGAATCATCACCAATTGGATAGAGCAGTGA

mRNA sequence

ATGAAGACGATAAGGCAACGACTTCCCTTACGCCGTCTTCTACTTCCACCGCAGCTCCAGCTTCTCCACAATCAAATTCCCGCCATTCATTCTCTATTTTCTTCTTCTTCTTCCTCTTCCTCTTCCATTTCCGATTCTCCATCTGCTTCCGTACCCAGCAAAACGAATACGACTCTCACCCAACACGATCTCACCAAGATCAACCTCCTTCTTCCTCGTCTCTGTCTCTACAACCACCACTCCACTGCAATCACACTTCTCGACGCAGCTCTTCTCACTAATCCTCCACTTCAATCTCTTCCCCTTTCAATTCTTTCCCATTCCCTTGCTTCCCAATCTGATTTTTCCCACACAATGTCCCTCCTCACCCGTCTCAAGCACCACCGGAATGCCCTTCTCTATTCGAGCCCTGTTACCACCATGCTCGTTTTCTCTTATTGCAAGCGGCGGAAATCCAGGGAGGCCTTGAAGATTTTCCATTGGATGCTCAGACCAGGCTCGCCATGTAAGCCGGACGAGAGGGTTTACAGAACCCTGATTGCGGGACTGTGTAGGAAGGGGATGGTACTCGATGCTTTGAAGGTTCTCAGGAAAATGGTTGGTTCGAATTTGGTTCCGGATAGCGATCTGAGGAATTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATGATTGGTGAAGCAATGGAGTTAAACGAGACTTTGGATTGCGCTGGCGATCAGAATAGCAGTGACCGTCAGAGAAAGGTGTCGGAATTGTTGGACCGAATCATCACCAATTGGATAGAGCAGTGA

Coding sequence (CDS)

ATGAAGACGATAAGGCAACGACTTCCCTTACGCCGTCTTCTACTTCCACCGCAGCTCCAGCTTCTCCACAATCAAATTCCCGCCATTCATTCTCTATTTTCTTCTTCTTCTTCCTCTTCCTCTTCCATTTCCGATTCTCCATCTGCTTCCGTACCCAGCAAAACGAATACGACTCTCACCCAACACGATCTCACCAAGATCAACCTCCTTCTTCCTCGTCTCTGTCTCTACAACCACCACTCCACTGCAATCACACTTCTCGACGCAGCTCTTCTCACTAATCCTCCACTTCAATCTCTTCCCCTTTCAATTCTTTCCCATTCCCTTGCTTCCCAATCTGATTTTTCCCACACAATGTCCCTCCTCACCCGTCTCAAGCACCACCGGAATGCCCTTCTCTATTCGAGCCCTGTTACCACCATGCTCGTTTTCTCTTATTGCAAGCGGCGGAAATCCAGGGAGGCCTTGAAGATTTTCCATTGGATGCTCAGACCAGGCTCGCCATGTAAGCCGGACGAGAGGGTTTACAGAACCCTGATTGCGGGACTGTGTAGGAAGGGGATGGTACTCGATGCTTTGAAGGTTCTCAGGAAAATGGTTGGTTCGAATTTGGTTCCGGATAGCGATCTGAGGAATTGGGTTTTTAGGTGTTTGCTGAGAGAAGCGATGATTGGTGAAGCAATGGAGTTAAACGAGACTTTGGATTGCGCTGGCGATCAGAATAGCAGTGACCGTCAGAGAAAGGTGTCGGAATTGTTGGACCGAATCATCACCAATTGGATAGAGCAGTGA

Protein sequence

MKTIRQRLPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTLTQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTMSLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGDQNSSDRQRKVSELLDRIITNWIEQ
Homology
[Close]
BLAST of Lag0021769 vs. NCBI nr
Match: XP_038876976.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 1.3e-102
Identity = 216/266 (81.20%), Postives = 228/266 (85.71%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDS--PSASVPSKTNT 60
           MK IRQR LPL RL LPP  QLL  QIPAI     SSSSSSSSISDS   SAS+ S+ NT
Sbjct: 1   MKRIRQRLLPLHRLPLPP--QLLCYQIPAI----PSSSSSSSSISDSAPASASIASEPNT 60

Query: 61  TLTQHDL-TKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFS 120
           TLT  +L TKINLLLPRLC YNHHSTAI LLDA LLTNP LQSLPLSILSHSLASQSDF+
Sbjct: 61  TLTHDELITKINLLLPRLCFYNHHSTAIALLDATLLTNPSLQSLPLSILSHSLASQSDFA 120

Query: 121 HTMSLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVY 180
            TMSLLTRL HHRNALLYS+P+ TML+FSY KRRKS++ALKIFHWMLRPGSPCKPDERVY
Sbjct: 121 LTMSLLTRLNHHRNALLYSTPIITMLIFSYSKRRKSKDALKIFHWMLRPGSPCKPDERVY 180

Query: 181 RTLIAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDC 240
            TLIAGLCRKGM LDALKVLR MV SNLVPD DLRNWVFRCLLREAMIGEAMELNETL+ 
Sbjct: 181 NTLIAGLCRKGMTLDALKVLRNMVNSNLVPDCDLRNWVFRCLLREAMIGEAMELNETLNF 240

Query: 241 AGDQNSSDRQRKVSELLDRIITNWIE 263
            GDQN+SD  RKVSELLDRIITNWI+
Sbjct: 241 VGDQNTSDHLRKVSELLDRIITNWID 260

[Close]
BLAST of Lag0021769 vs. NCBI nr
Match: XP_023000755.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima] >XP_023000756.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima] >XP_023000757.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 375.2 bits (962), Expect = 4.7e-100
Identity = 206/263 (78.33%), Postives = 225/263 (85.55%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTL 60
           MKTIRQR LPLRRL LPP  QL+H+QIPAI + FSSSSSSSS        S  SK NTTL
Sbjct: 1   MKTIRQRLLPLRRLPLPP--QLVHDQIPAIGTPFSSSSSSSSVYD-----SAASKINTTL 60

Query: 61  TQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTM 120
           TQ +LTKI+LLLPRLCLYNHHSTAITLLD ALLTN  LQSLPLSILSHSLASQSDF+ TM
Sbjct: 61  TQDELTKISLLLPRLCLYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTM 120

Query: 121 SLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 180
           SLLTRLKHHRNALLYSSP+ TML+FSY K+RKS+EALKIFHWMLRPGSPCKPDE VY+TL
Sbjct: 121 SLLTRLKHHRNALLYSSPIITMLIFSYSKQRKSKEALKIFHWMLRPGSPCKPDEMVYKTL 180

Query: 181 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 240
           IAGLCRKGMVLDALK+L+ M+ SNLVPD DLR+WV  CLLREAMIGEA EL+ETL+   D
Sbjct: 181 IAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVCMCLLREAMIGEATELSETLNSIAD 240

Query: 241 QNSSDRQRKVSELLDRIITNWIE 263
           +N SD  RKVSELLDR+I NWIE
Sbjct: 241 RNISDHLRKVSELLDRVINNWIE 256

[Close]
BLAST of Lag0021769 vs. NCBI nr
Match: KAG6584178.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374.4 bits (960), Expect = 8.1e-100
Identity = 204/263 (77.57%), Postives = 226/263 (85.93%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTL 60
           MKT+RQR L L RL LPP  QL+H+QIPAI + FSSSSSSSS        S  SK NTTL
Sbjct: 1   MKTVRQRLLHLHRLPLPP--QLVHDQIPAIGTPFSSSSSSSSVYD-----SAASKINTTL 60

Query: 61  TQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTM 120
           TQ +LTKI+LLLPRLC YNHHSTAITLLD ALLTN  LQSLPLSILSHSLASQSDF+ TM
Sbjct: 61  TQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTM 120

Query: 121 SLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 180
           SLLTRLKHHRNALLYSSP+ TML+ SY ++RK +EALKIFHWMLRPGSPCKPDERVY+TL
Sbjct: 121 SLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTL 180

Query: 181 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 240
           IAGLCRKGMVLDALK+L+ M+ SNLVPD DLR+WVFRCLLREAMIGEA EL+ETL+  GD
Sbjct: 181 IAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGD 240

Query: 241 QNSSDRQRKVSELLDRIITNWIE 263
           +N+SD  R+VSELLDRIITNWIE
Sbjct: 241 RNTSDHLRRVSELLDRIITNWIE 256

[Close]
BLAST of Lag0021769 vs. NCBI nr
Match: XP_023520260.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-99
Identity = 205/263 (77.95%), Postives = 228/263 (86.69%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTL 60
           MKTIRQR LPL R  LPP  QL+H+QIPAI + F  SSSSSSS+ DS +    SK NTTL
Sbjct: 1   MKTIRQRLLPLHRRPLPP--QLVHDQIPAIGTPF--SSSSSSSVYDSAA----SKINTTL 60

Query: 61  TQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTM 120
           TQ +LTKI+LLLPRLCL NHHSTAITLLDAALLTN  LQSLPLSILSHSLASQSDF+ TM
Sbjct: 61  TQDELTKISLLLPRLCLDNHHSTAITLLDAALLTNLSLQSLPLSILSHSLASQSDFALTM 120

Query: 121 SLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 180
           SLLTRL HHRNALLYSSP+ TML+FSYCK+RK +EALKIFHWMLRPGSPCKPDERVY+TL
Sbjct: 121 SLLTRLNHHRNALLYSSPIITMLIFSYCKQRKFKEALKIFHWMLRPGSPCKPDERVYKTL 180

Query: 181 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 240
           IAGLCRKGMVLDALK+L+ M+ SNLVPD DLR+WVFRCLLREAMIGEA EL+ETL+  GD
Sbjct: 181 IAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGD 240

Query: 241 QNSSDRQRKVSELLDRIITNWIE 263
           +N+S+  +KVSELLD II NWIE
Sbjct: 241 RNTSEHLKKVSELLDGIINNWIE 255

[Close]
BLAST of Lag0021769 vs. NCBI nr
Match: KAG7019769.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.1 bits (954), Expect = 4.0e-99
Identity = 203/263 (77.19%), Postives = 225/263 (85.55%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTL 60
           MKTI QR LPL RL LPP  QL+H+QIPAI + FS SSSSSS        S  SK NTTL
Sbjct: 1   MKTITQRLLPLHRLPLPP--QLVHDQIPAIGTPFSFSSSSSSVYD-----SAASKINTTL 60

Query: 61  TQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTM 120
           TQ +LTKI+LLLPRLC YNHHSTAITLLD ALLTN  LQSLPLSILSHSLASQSDF+ TM
Sbjct: 61  TQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTM 120

Query: 121 SLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 180
           SLLTRLKHHRNALLYSSP+ TML+ SY ++RK +EALKIFHWMLRPGSPCKPDERVY+TL
Sbjct: 121 SLLTRLKHHRNALLYSSPIITMLILSYSRQRKLKEALKIFHWMLRPGSPCKPDERVYKTL 180

Query: 181 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 240
           IAGLCRKGMVLDALK+L+ M+ SNLVPD DLR+WVFRCLLREAMIG+A EL+ETL+  GD
Sbjct: 181 IAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGKATELSETLNSIGD 240

Query: 241 QNSSDRQRKVSELLDRIITNWIE 263
           +N+SD  R+VSELLDRIITNWIE
Sbjct: 241 RNTSDHLRRVSELLDRIITNWIE 256

[Close]
BLAST of Lag0021769 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 44/174 (25.29%), Postives = 86/174 (49.43%), Query Frame = 0 

Query: 68  NLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTMSLLTRLK- 127
           N L+  LCL      A++LL+  + +      +    L + L  Q   +  + LL+ ++ 
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355

Query: 128 --HHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAGLC 187
             +H N  +YS     +L+    K  K+ EA+ ++  M   G  CKP+  VY  L+ GLC
Sbjct: 356 RGYHLNQHIYS-----VLISGLFKEGKAEEAMSLWRKMAEKG--CKPNIVVYSVLVDGLC 415

Query: 188 RKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAG 239
           R+G   +A ++L +M+ S  +P++   + + +   +  +  EA+++ + +D  G
Sbjct: 416 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462

[Close]
BLAST of Lag0021769 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.5e-08
Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 0 

Query: 142 LVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAGLCRKGMVLDALKVLRKMVG 201
           L+ ++CK  +  EA++IF  M R G  CKPD   + +LI+GLC    +  AL +LR M+ 
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKG--CKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 524

Query: 202 SNLVPDSDLRNWVFRCLLREAMIGEAMEL 231
             +V ++   N +    LR   I EA +L
Sbjct: 525 EGVVANTVTYNTLINAFLRRGEIKEARKL 551

[Close]
BLAST of Lag0021769 vs. ExPASy Swiss-Prot
Match: Q8LDU5 (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 6.4e-07
Identity = 48/194 (24.74%), Postives = 85/194 (43.81%), Query Frame = 0 

Query: 63  DLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTMSLL 122
           D+    +L+   C     + A+ LLD  L        L  + L +SL  ++       LL
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283

Query: 123 TRLK---HHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 182
            R+K    + + + Y++     ++  +C+  ++ +A K+   ML  G  C P+   YRTL
Sbjct: 284 CRMKLKGCNPDLVHYNT-----MILGFCREDRAMDARKVLDDMLSNG--CSPNSVSYRTL 343

Query: 183 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 242
           I GLC +GM  +  K L +M+     P   + N + +       + EA ++ E +   G+
Sbjct: 344 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 403

Query: 243 QNSSDRQRKVSELL 254
              SD    V  L+
Sbjct: 404 TLHSDTWEMVIPLI 410

[Close]
BLAST of Lag0021769 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.3e-07
Identity = 46/168 (27.38%), Postives = 80/168 (47.62%), Query Frame = 0 

Query: 63  DLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTMSLL 122
           DL  ++ L+  LCL    S A+ L+D  +        +    + + L    + +  + L 
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233

Query: 123 TRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAG 182
            +++  RN +  S    ++++ S CK     +AL +F+ M   G   K D   Y +LI G
Sbjct: 234 RKME-ERN-IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG--IKADVVTYSSLIGG 293

Query: 183 LCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMEL 231
           LC  G   D  K+LR+M+G N++PD    + +    ++E  + EA EL
Sbjct: 294 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337

[Close]
BLAST of Lag0021769 vs. ExPASy Swiss-Prot
Match: P0C8Q3 (Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX=3702 GN=At4g19890 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 37/104 (35.58%), Postives = 49/104 (47.12%), Query Frame = 0 

Query: 132 LLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAGLCRKGMVLD 191
           L+ +    T ++  YCK      ALK FH M R G  C PD   Y +LI+GLC+K MV +
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG--CVPDSFTYGSLISGLCKKSMVDE 588

Query: 192 ALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLD 236
           A K+   M+   L P    R  +     +      AM L E LD
Sbjct: 589 ACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD 630

[Close]
BLAST of Lag0021769 vs. ExPASy TrEMBL
Match: A0A6J1KEJ7 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495112 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.3e-100
Identity = 206/263 (78.33%), Postives = 225/263 (85.55%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTL 60
           MKTIRQR LPLRRL LPP  QL+H+QIPAI + FSSSSSSSS        S  SK NTTL
Sbjct: 1   MKTIRQRLLPLRRLPLPP--QLVHDQIPAIGTPFSSSSSSSSVYD-----SAASKINTTL 60

Query: 61  TQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTM 120
           TQ +LTKI+LLLPRLCLYNHHSTAITLLD ALLTN  LQSLPLSILSHSLASQSDF+ TM
Sbjct: 61  TQDELTKISLLLPRLCLYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTM 120

Query: 121 SLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 180
           SLLTRLKHHRNALLYSSP+ TML+FSY K+RKS+EALKIFHWMLRPGSPCKPDE VY+TL
Sbjct: 121 SLLTRLKHHRNALLYSSPIITMLIFSYSKQRKSKEALKIFHWMLRPGSPCKPDEMVYKTL 180

Query: 181 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 240
           IAGLCRKGMVLDALK+L+ M+ SNLVPD DLR+WV  CLLREAMIGEA EL+ETL+   D
Sbjct: 181 IAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVCMCLLREAMIGEATELSETLNSIAD 240

Query: 241 QNSSDRQRKVSELLDRIITNWIE 263
           +N SD  RKVSELLDR+I NWIE
Sbjct: 241 RNISDHLRKVSELLDRVINNWIE 256

[Close]
BLAST of Lag0021769 vs. ExPASy TrEMBL
Match: A0A6J1E820 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111431498 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.6e-98
Identity = 202/263 (76.81%), Postives = 222/263 (84.41%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTL 60
           MKTI QR LPL RL LPP  QL+H+QIPAI + FS  SSSSS        S  SK NTTL
Sbjct: 1   MKTITQRLLPLHRLPLPP--QLVHDQIPAIGTPFSFFSSSSSVYD-----SAASKINTTL 60

Query: 61  TQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTM 120
           TQ +LTKI+LLLPRLC YNHHSTAITLLD ALLTN  LQSLPLSILSHSLASQSDF+ TM
Sbjct: 61  TQDELTKISLLLPRLCFYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTM 120

Query: 121 SLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 180
           SLLTRLKHHRNALLYSSP+ TML+ SY K+RK +EALKIFHWMLRPGSPCKPDERVY+TL
Sbjct: 121 SLLTRLKHHRNALLYSSPIITMLILSYSKQRKLKEALKIFHWMLRPGSPCKPDERVYKTL 180

Query: 181 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 240
           IAGLCRKGMVLDALK+L+ M+ SNLVPD DLR+WVFRCLLREAMIGEA EL+ETL+  GD
Sbjct: 181 IAGLCRKGMVLDALKILKNMIDSNLVPDYDLRSWVFRCLLREAMIGEATELSETLNSIGD 240

Query: 241 QNSSDRQRKVSELLDRIITNWIE 263
           +N+SD  R+VSELLD II NWIE
Sbjct: 241 RNTSDHLRRVSELLDGIINNWIE 256

[Close]
BLAST of Lag0021769 vs. ExPASy TrEMBL
Match: A0A6J1C6B0 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111008811 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.6e-98
Identity = 202/255 (79.22%), Postives = 216/255 (84.71%), Query Frame = 0 

Query: 1   MKTIRQRLPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTLT 60
           MKTIRQRLPL+RL LPP  Q + NQIPAI S F     SSSSISDS SASV SKTNTTLT
Sbjct: 1   MKTIRQRLPLQRLQLPP--QFIQNQIPAIDSPF----YSSSSISDSESASVASKTNTTLT 60

Query: 61  QHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTMS 120
           Q +LTKINLLLPRLCL++HHSTAITLLDAALLTNP LQSLPLSIL+HSLASQSDF+H MS
Sbjct: 61  QDELTKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMS 120

Query: 121 LLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLI 180
           LLTRLKHHRNA LYSSP+ TML+ SYCKRRK REALKIFHWM RPGSPC PDE+VY TLI
Sbjct: 121 LLTRLKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLI 180

Query: 181 AGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGDQ 240
           AGLCR GMVLDALKVLR M+GSNLVPDS+LRNWVFR LLREAMIGEAME NE LD   DQ
Sbjct: 181 AGLCRHGMVLDALKVLRNMIGSNLVPDSNLRNWVFRSLLREAMIGEAMEFNEILDRVEDQ 240

Query: 241 NSSDRQRKVSELLDR 256
           N S+  RK  E  D+
Sbjct: 241 NLSNHLRKGEESSDQ 249

[Close]
BLAST of Lag0021769 vs. ExPASy TrEMBL
Match: A0A0A0LRQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051900 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.8e-92
Identity = 193/263 (73.38%), Postives = 219/263 (83.27%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTL 60
           MK IRQ+ L L+RL L P  +LL  QIPAI S F   SSSSS ISDSPSAS+ +K NTTL
Sbjct: 1   MKRIRQQLLTLQRLPLSP--ELLRFQIPAILSPF---SSSSSFISDSPSASIATKPNTTL 60

Query: 61  TQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTM 120
           T  +LT+INLLLPRLCL+NH STAI+LL A LLTNP L SL LS+LSHSLASQSDF+ TM
Sbjct: 61  THDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTM 120

Query: 121 SLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 180
           SLLTRLKHH NALLYS+P+ TML+ SYCKRRKS+EALK+FHWMLRPGSPCKP+ERVY+TL
Sbjct: 121 SLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTL 180

Query: 181 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 240
           IAGL RKGM  DALKVLR M+ SNLVPD DLRNWVFR LL+EAMI EAME N+ L+  GD
Sbjct: 181 IAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGD 240

Query: 241 QNSSDRQRKVSELLDRIITNWIE 263
           QN+ D  R+VSELL+RIITNWI+
Sbjct: 241 QNTIDHLRRVSELLNRIITNWID 258

[Close]
BLAST of Lag0021769 vs. ExPASy TrEMBL
Match: A0A5A7UP05 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002100 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 6.5e-87
Identity = 185/250 (74.00%), Postives = 206/250 (82.40%), Query Frame = 0 

Query: 1   MKTIRQR-LPLRRLLLPPQLQLLHNQIPAIHSLFSSSSSSSSSISDSPSASVPSKTNTTL 60
           MK IRQ+ L L+RL L P  +LL  QIP I S F   SSSSS IS SPSAS+ ++ NTTL
Sbjct: 1   MKRIRQQLLTLQRLPLSP--ELLRFQIPPILSPF---SSSSSFISGSPSASIATEPNTTL 60

Query: 61  TQHDLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTM 120
           T  +LT+INLLLPRLCLYNH STAITLL A LLTNP LQSL LS+LSHSLASQSDF+ TM
Sbjct: 61  THDELTRINLLLPRLCLYNHLSTAITLLHATLLTNPSLQSLSLSVLSHSLASQSDFALTM 120

Query: 121 SLLTRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 180
           SLLTRLKHH NALLYS+P+ TML+ SYCKRRKS+EALKIFHWMLRPGSPCKP+ERVY+TL
Sbjct: 121 SLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKIFHWMLRPGSPCKPEERVYKTL 180

Query: 181 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 240
           IAGL RKGM  DALKVLR M+ SNLVPD DLRNWVFRCLLREAMI EAME NET +  GD
Sbjct: 181 IAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRCLLREAMIPEAMEFNETFNFVGD 240

Query: 241 QNSSDRQRKV 250
           Q++ D  R+V
Sbjct: 241 QDTIDHLRRV 245

[Close]
BLAST of Lag0021769 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 44/174 (25.29%), Postives = 86/174 (49.43%), Query Frame = 0 

Query: 68  NLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTMSLLTRLK- 127
           N L+  LCL      A++LL+  + +      +    L + L  Q   +  + LL+ ++ 
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355

Query: 128 --HHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAGLC 187
             +H N  +YS     +L+    K  K+ EA+ ++  M   G  CKP+  VY  L+ GLC
Sbjct: 356 RGYHLNQHIYS-----VLISGLFKEGKAEEAMSLWRKMAEKG--CKPNIVVYSVLVDGLC 415

Query: 188 RKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAG 239
           R+G   +A ++L +M+ S  +P++   + + +   +  +  EA+++ + +D  G
Sbjct: 416 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462

[Close]
BLAST of Lag0021769 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 5.3e-09
Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 0 

Query: 142 LVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAGLCRKGMVLDALKVLRKMVG 201
           L+ ++CK  +  EA++IF  M R G  CKPD   + +LI+GLC    +  AL +LR M+ 
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKG--CKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 524

Query: 202 SNLVPDSDLRNWVFRCLLREAMIGEAMEL 231
             +V ++   N +    LR   I EA +L
Sbjct: 525 EGVVANTVTYNTLINAFLRRGEIKEARKL 551

[Close]
BLAST of Lag0021769 vs. TAIR 10
Match: AT4G01400.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 4.5e-08
Identity = 48/194 (24.74%), Postives = 85/194 (43.81%), Query Frame = 0 

Query: 63  DLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTMSLL 122
           D+    +L+   C     + A+ LLD  L        L  + L +SL  ++       LL
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283

Query: 123 TRLK---HHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTL 182
            R+K    + + + Y++     ++  +C+  ++ +A K+   ML  G  C P+   YRTL
Sbjct: 284 CRMKLKGCNPDLVHYNT-----MILGFCREDRAMDARKVLDDMLSNG--CSPNSVSYRTL 343

Query: 183 IAGLCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLDCAGD 242
           I GLC +GM  +  K L +M+     P   + N + +       + EA ++ E +   G+
Sbjct: 344 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 403

Query: 243 QNSSDRQRKVSELL 254
              SD    V  L+
Sbjct: 404 TLHSDTWEMVIPLI 410

[Close]
BLAST of Lag0021769 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.9e-08
Identity = 46/168 (27.38%), Postives = 80/168 (47.62%), Query Frame = 0 

Query: 63  DLTKINLLLPRLCLYNHHSTAITLLDAALLTNPPLQSLPLSILSHSLASQSDFSHTMSLL 122
           DL  ++ L+  LCL    S A+ L+D  +        +    + + L    + +  + L 
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233

Query: 123 TRLKHHRNALLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAG 182
            +++  RN +  S    ++++ S CK     +AL +F+ M   G   K D   Y +LI G
Sbjct: 234 RKME-ERN-IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG--IKADVVTYSSLIGG 293

Query: 183 LCRKGMVLDALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMEL 231
           LC  G   D  K+LR+M+G N++PD    + +    ++E  + EA EL
Sbjct: 294 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337

[Close]
BLAST of Lag0021769 vs. TAIR 10
Match: AT4G19890.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 7.7e-08
Identity = 37/104 (35.58%), Postives = 49/104 (47.12%), Query Frame = 0 

Query: 132 LLYSSPVTTMLVFSYCKRRKSREALKIFHWMLRPGSPCKPDERVYRTLIAGLCRKGMVLD 191
           L+ +    T ++  YCK      ALK FH M R G  C PD   Y +LI+GLC+K MV +
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG--CVPDSFTYGSLISGLCKKSMVDE 588

Query: 192 ALKVLRKMVGSNLVPDSDLRNWVFRCLLREAMIGEAMELNETLD 236
           A K+   M+   L P    R  +     +      AM L E LD
Sbjct: 589 ACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD 630

The following BLAST results are available for this feature:
BLAST of Lag0021769 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876976.11.3e-10281.20pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benin... [more]
XP_023000755.14.7e-10078.33pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucur... [more]
KAG6584178.18.1e-10077.57Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_023520260.13.1e-9977.95pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucur... [more]
KAG7019769.14.0e-9977.19Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of Lag0021769 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O494362.6e-0825.29Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
Q9FMF67.5e-0835.96Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q8LDU56.4e-0724.74Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
Q6NQ838.3e-0727.38Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
P0C8Q31.1e-0635.58Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana OX... [more]
BLAST of Lag0021769 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KEJ72.3e-10078.33pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc... [more]
A0A6J1E8203.6e-9876.81pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc... [more]
A0A6J1C6B03.6e-9879.22pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Mom... [more]
A0A0A0LRQ91.8e-9273.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051900 PE=4 SV=1[more]
A0A5A7UP056.5e-8774.00Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo var. maku... [more]
BLAST of Lag0021769 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G20090.11.8e-0925.29Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G64320.15.3e-0935.96Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G01400.34.5e-0824.74FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G22470.15.9e-0827.38Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G19890.17.7e-0835.58Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 65..263
e-value: 8.4E-20
score: 73.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 140..160
e-value: 0.17
score: 12.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 175..208
e-value: 3.8E-8
score: 31.0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 169..200
e-value: 5.4E-11
score: 42.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..206
score: 11.673842
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..57
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 170..239
NoneNo IPR availablePANTHERPTHR47932:SF1SUBFAMILY NOT NAMEDcoord: 170..239

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021769.1Lag0021769.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding