Lag0021746 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021746
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionGAST1 protein-like protein 5
Locationchr7: 11388312 .. 11392497 (-)
RNA-Seq ExpressionLag0021746
SyntenyLag0021746
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGCGGTGGGAAATGGTGGGAATGGAGGTTTTTGGCTCTCAAGGGTTTTTGGCGGTGGGAAATGGTGGGAATGGAAGTTCGTGGAAGACGAAGATGGACGGACGGGCTGGTGCATGAATGCGGTTCTGGTGGGAGGTTGGGCGATGTTATGACATGTCATAATTGCAGCACTTAAGGTATCCTAATTACTGTATTCTTATTTGTATTTTACTTTTCCATGTTTTCTTAGTTGCAGGGTAGTATATCTTCCTATTGACAGGACTGCTTTTTCCATTAATGCATTCCTGAGATGTTTCTCTCTACTGAGGGAGGTTGAACTTTGTAATTCTTCCCCAATAAAGGTATTGACTCCTTCTTCCGAGAAACAATTTTTTCAAGTAGATATAGATTTTTAAAATAGTTTTGTTTTTGTTTTTTGGATTTTTTAATTTCAAACTTCCTAAAATGTCTCCAACTTATTTTTAGGGTATATTTTATCTCTCTTAAACTCTGATTTTGGTTTTAAACGTTAAGAGAACACGTTAGGAGTTTGTTGGGGGACATTTGTGTCTTTTACAAATAGGGATTTATTAATCACTAAATCGTTTAGCCATCTATTTAATTTATAAACGTTTGTAGCCATTTTTCAAGCCACCTATTTATTTTTAGCTATATTTCTTGTTGTCCCTTTTCAAAAACCAAAAACCAAAAACGAAATGGTTATGAAACGAGCCTTAGTAATTTAGTTGGAAGATAATATTGCATGAAAAAAAAACTACATTGTATTAGCTATAAGCTAGAAATTTTAACAATTAATTAGACATTTTGAAAAAGCGTGCGCTTTCTCTCTAGGCACATCCAGAGAAAGCATTCCTAAAAATCAATGAAAGCCTACTAGACACATCTTTCGACGCCGTCTTCCACTGCATCGGTAGAGCTTTGATCTCTCAACGAGTTTTACTTGTGTCGGGAGAAATGTCGTCAAAAGAATTGGATTTTCTTGCAGTGTTATAAGATAAATTTATTTTGTTTTTTGTTTTTTTTTTTTCCATTAATTCTATAGTATAGAATTAAAACTGAGTGAAAAGGTAACTTGTAAAGTTTGAGCACAACCCTTGATGAAATATGATAATGGTTGAGCCATTGTTGATCCAAATAAAAGTGTATAATTGGAATACAAGTTATAGAATCCTTTGAGGCGCAAAATGTTTGTAGAGGGCAGAGGAAAGAAACAGACGGCGATCGCAGGGATATTCACGGGAAGAAATTAAATCGCCGCGCGCGCACAGCCGACACACTGTTGCCTTTGAATGGCTGAGATGTGCGGCTCAGTCTCTCTCTTCTCTCTCTCACAAACACACACTTGCTTTGGAAATATTTCCAAATATATTGCCAACACCATTACACGAGACAAAAGCTGATCACGAGATCCATCAAATACAAATACACTCACAAAAAACTCTATCTCTCATTTGCGTTTGGTTTTGTTGGGAAGGGAATTGCAAACAGTTAACATGCATGTGACCCTGATCTCTCTGTGTGTGGTGGGTTTGGATTAGTTTTGTGGATTGGGAATTAGAAATTATAATACAACAAAGAGTGACATGTGAGTGCACATGCATGAGTGGTGAGGCTCTCTCTCTCCCATCGTTTTCTGGGAAACCTCTCTCTTCCTAAGTCACATGGATGATGCTAATGTATTCATCTCATTAAAACCAACCACTAAGTTCCGCTTTGGTAATACTTTGTCCGTTTGATAACTATTTGGTTTCTTACGTTATTTAAATCTTTGTAAAGGACACATTTGAATTCTTAACCTAATTAAAAAGGCAAAAATAAATTTTGAAGGTCCTGTAACCATTTGGATTTTGGTTTTTGGTTTTTGAAAATTAAGCTTATACACACATATACTTCCACCTATAAGTTTCTTGGTTTTAGTATCAATCTTCTACCCTTTTTTCAAAAACCAAGTCCAATTTTGGAAACAAAAAAAAAAAAATAGTTTACCAAAACTTGTTTTTGTTTTTAAAATTTGGCTAAGAATTCAAATTGCAACCTTAACTAGGATGAAAGTCATGGTAGAGAATTTAAGAGAAAATAAGCATAATTTTCAAAAACCAAATGGTTATCAAACGAGACCTAAGAATTTCTTTTTTTAGTTTTCAAAACTTGACTTGGTTTTTTATTACAAAGGAAGGTAAAAAAAACAACTTATAGGTGAAAGTAGTGTTTATAAGCTTAATTTTCAGAAATCGAAAATCAAATAGTTATCAAACTAGACTTGTTCACTTTTGATTTTTGGTTCTTGAAAACAATATTTGTTATCTCATAATTTCTTTACAATGATTTTCGTTAAAAAAAATTTGAGTTCTTAGTCAAATTCCAAAACACAAAAACAAGTTTTTAAAACTTTCTTTTTTTTTTTTTTTTCAAAACTTGACTTGATTTGAAAAACACTTACTGAGAAAGTAATGTGTGTTTATAAACCTGATTTTCAAAAACCAAATATTTATCAAAAGGAACTTAATTATAATAAATATCTCTCCTAACTAGTATTGTAATTATTGTAATTATTAGGATATCCAACAAAAATTCTCATTAGAATATCTCTTATTACCATTACAAAAAGAGTCATTCAAAGAGGATGAGACATTCCCATGCATAAGACAAACTATGATTATCCTTAATTCTCAACCACACAATATTTTTCTGGCCTTCCTTTTTCTACCATCCAACTATATATATAATGTACTGCTCTCCCTCTCTGGTGTAGTAAGATATAGCTGTTTGCAATGGCAAAGAAGCAAAGAATGGTGATGTTCTTTCTAGTTATGTTGCTGAATTGGCTTCTCTTAGTCCAAAATCATGTAACCAACATTCTCTCTTATTACCCACGTTTATTACTAGCATTTTTTTTTTTGAGTTAGTTCATCAACATTTGGAGGTGGAGGATTCGAATCTTGATCGAGAGTATATGCCAGTTATCGCTGCGAGCTATACTCGCTTTCGCTATTACTAGCAATTTTTTATGCCTCAGCTCTCAAATATTTCATTTCACATGATGTTCTAAGCTCTGTCTTGTAATCTTGGCTTTGACTATTGGTTTTGTTTGGTGTGTTTAGGCCATCAGTGAGGCTCCAACGCCACAGCCACAGCCCCAGACCAGTGGCAATTCTACCACTCCCATGGTACCAAGATCATTTATTAGTTATCATTTTTTCATATTCAATTTCAAAGCTAATGTTAAACATTTTTCTTTTTCTCTTTTCCAAATTTCAGCATGGAGTCACTGAAGGCAGCCTACAACCTCAAGGTAAAAAATTAATATGGATTCATGATAAAAAATAATCTTTATAAAATTTCCACATTCATCTTTGATAATGTAGGGGTGAGTTTGACATGCTTACTAGTTTAAATCCTTTTTAATTTTTTTTTTCTTTAGGTTGATGTTCATTCAAAGATGTGATTTGTTTAATTTGTTTACGATTTTACTTAAAAGTGATTTTAATCACAACTTTATTTGACTTTATTTGGTTGCACAAAGTTATTCTACAAAGATTTTATTTATTTATTTTTTTTTTTTGTTGTATACCAATATGTAATGATCTCCCTACATATCTTATTAAAATCTTGACAATTAAGAAAGAGAAATGTAGAAAATGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATCTCTCATAGTTGTCAACATTTTAACACTGGTATGTAGGAAGAATCCTACATACCGATATGTAGCAAAATACTGTCCTACAAATGTCAAATTACCATATGGATTACCCTAGGGAGAAGGGGGAGAAGAGGAGAGGCTTTAAATTTGATGATAAAATTGTAATTTTTGCGTATTTTGAGTTTTGTTAAAATTTTTCTTCTTAGTGATTGTAAAGTGATTCCTTCTTTATAATCACTTTAAACTGACCATTGAAAAAGTAAGTAGAGATTAATTGAGTTGAGGACTTTGTTGCAGAGTGTGGACCTCGATGCACAGAGAGATGTTCAAAGACAGCGTTCAAGAAGCCATGCATGTTCTTCTGCCAAAAGTGCTGTGCCAAGTGCTTGTGTGTGCCTTATGGGACTTATGGCAACAAGCAATCTTGTCCCTGCTATAATCAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTGAAATTCCCACCTCCTCTCTTTAA

mRNA sequence

ATGTTTGGCGGTGGGAAATGGTGGGAATGGAGGTTTTTGGCTCTCAAGGGTTTTTGGCGGTGGGAAATGGTGGGAATGGAAGTTCGTGGAAGACGAAGATGGACGGACGGGCTGGTGCATGAATGCGGTTCTGGTGGGAGGGTAGTATATCTTCCTATTGACAGGACTGCTTTTTCCATTAATGCATTCCTGAGATGTTTCTCTCTACTGAGGGAGGTTGAACTTTGTAATTCTTCCCCAATAAAGGCCATCAGTGAGGCTCCAACGCCACAGCCACAGCCCCAGACCAGTGGCAATTCTACCACTCCCATGAGTGTGGACCTCGATGCACAGAGAGATGTTCAAAGACAGCGTTCAAGAAGCCATGCATGTTCTTCTGCCAAAAGTGCTGTGCCAAGTGCTTGTGTGTGCCTTATGGGACTTATGGCAACAAGCAATCTTGTCCCTGCTATAATCAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTGAAATTCCCACCTCCTCTCTTTAA

Coding sequence (CDS)

ATGTTTGGCGGTGGGAAATGGTGGGAATGGAGGTTTTTGGCTCTCAAGGGTTTTTGGCGGTGGGAAATGGTGGGAATGGAAGTTCGTGGAAGACGAAGATGGACGGACGGGCTGGTGCATGAATGCGGTTCTGGTGGGAGGGTAGTATATCTTCCTATTGACAGGACTGCTTTTTCCATTAATGCATTCCTGAGATGTTTCTCTCTACTGAGGGAGGTTGAACTTTGTAATTCTTCCCCAATAAAGGCCATCAGTGAGGCTCCAACGCCACAGCCACAGCCCCAGACCAGTGGCAATTCTACCACTCCCATGAGTGTGGACCTCGATGCACAGAGAGATGTTCAAAGACAGCGTTCAAGAAGCCATGCATGTTCTTCTGCCAAAAGTGCTGTGCCAAGTGCTTGTGTGTGCCTTATGGGACTTATGGCAACAAGCAATCTTGTCCCTGCTATAATCAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTGAAATTCCCACCTCCTCTCTTTAA

Protein sequence

MFGGGKWWEWRFLALKGFWRWEMVGMEVRGRRRWTDGLVHECGSGGRVVYLPIDRTAFSINAFLRCFSLLREVELCNSSPIKAISEAPTPQPQPQTSGNSTTPMSVDLDAQRDVQRQRSRSHACSSAKSAVPSACVCLMGLMATSNLVPAIINGRLKEEAPNALEIPTSSL
Homology
[Close]
BLAST of Lag0021746 vs. NCBI nr
Match: KAA0057216.1 (GAST1 protein-like protein 5 [Cucumis melo var. makuwa] >TYK18745.1 GAST1 protein-like protein 5 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-13
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0 

Query: 105 SVDLDAQRDVQRQRSRSHACSSAKSAVPSACVCLMGLMATSNLVPAIINGRLKEEAPNAL 164
           +V LDAQ DVQRQ SRSHACS  KS VP+ACV LMGLMAT+ LV A INGRL+EEAPNAL
Sbjct: 12  NVGLDAQGDVQRQHSRSHACSFVKSVVPNACVFLMGLMATNKLVLATINGRLREEAPNAL 71

Query: 165 E 166
           +
Sbjct: 72  D 72

[Close]
BLAST of Lag0021746 vs. NCBI nr
Match: KAF5750255.1 (hypothetical protein HS088_TW03G00589 [Tripterygium wilfordii])

HSP 1 Score: 78.2 bits (191), Expect = 7.8e-11
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 0 

Query: 83  AISEAPTPQPQPQTSGNSTTPMSVDLDAQRDVQRQRSRSHACSSAKSAVPSACVCLMGLM 142
           A+SEAPTPQPQP    +S  P +V  DA RD + Q +RSHA SSAK+AV SAC CL  LM
Sbjct: 284 AMSEAPTPQPQP---NSSNLPQNVLRDAARDARTQHTRSHAYSSAKNAVQSACACLQELM 343

Query: 143 ATSNLVPAIIN--GRLKEEAPNALE 166
            TS+  PA++   GR +EE PNALE
Sbjct: 344 ETSS--PALVTTIGRPREEDPNALE 363

[Close]
BLAST of Lag0021746 vs. NCBI nr
Match: KAG8496905.1 (hypothetical protein CXB51_008010 [Gossypium anomalum])

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-10
Identity = 47/81 (58.02%), Postives = 53/81 (65.43%), Query Frame = 0 

Query: 86  EAPTPQPQPQTSGNSTTPMSVDLDAQRDVQRQRSRSHACSSAKSAVPSACVCLMGLMATS 145
           EAP PQPQP   GN T  MSVDL A +DVQ + +RSHACSSA SA PSACVC   L  TS
Sbjct: 34  EAPAPQPQP--PGNFT--MSVDLAAVKDVQTRNTRSHACSSATSAAPSACVCRQALTETS 93

Query: 146 NLVPAIINGRLKEEAPNALEI 167
               A   GR +EE P+AL +
Sbjct: 94  KSALATTIGRRREEDPSALNL 110

[Close]
BLAST of Lag0021746 vs. NCBI nr
Match: GAV69370.1 (hypothetical protein CFOL_v3_12871 [Cephalotus follicularis])

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-09
Identity = 49/114 (42.98%), Postives = 63/114 (55.26%), Query Frame = 0 

Query: 53  IDRTAFSINA-FLRCFSLLREVELCNSSPIKAISEAPTPQPQPQTSGNSTTPMSVDLDAQ 112
           +D T+ S    FL C  +  + ++ N   +  +S+          +     P SVD DA 
Sbjct: 49  VDDTSMSTKVYFLVCNPIKDQDQIINQKMLAKMSDI------DDITWTIFDPGSVDQDAL 108

Query: 113 RDVQRQRSRSHACSSAKSAVPSACVCLMGLMATSNLVPAIINGRLKEEAPNALE 166
            DVQ   +RSHACS AKSAVPSACVCL  LMATS    A + GR +EE PNAL+
Sbjct: 109 EDVQIHNTRSHACSFAKSAVPSACVCLQELMATSKFALATMTGRPREEDPNALD 156

[Close]
BLAST of Lag0021746 vs. NCBI nr
Match: PPD97400.1 (hypothetical protein GOBAR_DD05572 [Gossypium barbadense])

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-09
Identity = 51/104 (49.04%), Postives = 59/104 (56.73%), Query Frame = 0 

Query: 63  FLRCFSLLREVELCNSSPIKAISEAPTPQPQPQTSGNSTTPMSVDLDAQRDVQRQRSRSH 122
           FL    LL       S+  +   EAP PQPQP   GN T  MSVDL A +DVQ + +RSH
Sbjct: 11  FLGVMLLLLAENNAASNSHEMSREAPAPQPQP--PGNFT--MSVDLAAVKDVQTRNTRSH 70

Query: 123 ACSSAKSAVPSACVCLMGLMATSNLVPAIINGRLKEEAPNALEI 167
           ACSSA SA PSACVC   L  TS    A   GR + E P+AL +
Sbjct: 71  ACSSATSAAPSACVCRQALTETSKSALATTIGRPRVEDPSALNL 110

The following BLAST results are available for this feature:
BLAST of Lag0021746 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0057216.12.2e-1375.41GAST1 protein-like protein 5 [Cucumis melo var. makuwa] >TYK18745.1 GAST1 protei... [more]
KAF5750255.17.8e-1157.65hypothetical protein HS088_TW03G00589 [Tripterygium wilfordii][more]
KAG8496905.12.9e-1058.02hypothetical protein CXB51_008010 [Gossypium anomalum][more]
GAV69370.11.1e-0942.98hypothetical protein CFOL_v3_12871 [Cephalotus follicularis][more]
PPD97400.12.5e-0949.04hypothetical protein GOBAR_DD05572 [Gossypium barbadense][more]
BLAST of Lag0021746 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021746.1Lag0021746.1mRNA