Lag0021736 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0021736
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Duplicated homeodomain-like superfamily protein
Location	chr7: 11293968 .. 11295209 (-)
RNA-Seq Expression	Lag0021736
Synteny	Lag0021736

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTCAAAACAACTTGCCTTCATCGTTTGGTCCTCCTCCTTCACCAATTCCACATTCTAATGAGAATCCAACGATGGAGATGAATATAGACGAGACACAACCCCACTCGTTTTCTTCATTCTTTTCGGGTGGTTGGACCGACAATGTGGTGTTCGAGCATGAGCCGCCAATGAGAAATCCGACAGTAGAGATTAGAGAGAATAATAATGTGACGAAGCAGAATCCAATGATCATGGATTCCTTTGCATTTGATCCAAATACTTGTAATAATAATAATGTTGTTAACCATAATTACATGTCCTTATTAATGGGAAACGATGAGGCTTCTTGGGATGACGAGTGCGTTGATATGTTGGATTTTTTTCCCAACAATAATATAGGCCAATGTTCTTATTCTAAATCTGAAACGCCGCAGTTTGATAATGCTTCTGCTTTCACTGATCAATCCACTTCCAACAACAACATCATGTCTGCTTCAAATCCATTATTGTCCAACGTTGTTGATCCTTATCTATCTTCCCAGAATGAGAAGACATCTCCTAATAACTTTTTGTCTGATCCCATGGGGCATACAGGTTTGCTTTCTGATGTCGTAAATTTTGATGCTGCAAGGAGCTTTGGAGATGTGACCACCATTAATGGCGAAGCCAAATCATCGGAGACCAAGAAGAACCGCAACCCTTGGAGTGAAGACGAGCACAAGTATGTTAATCTATCACAATTCTCTTCGATCCTTTTATTTTATTCTTTTCTTTTTCAATTTCATGAAAAGAAAATTCTAGAGGCGTTTTTATGGTTGAGTTGAACAATGGCCGAATGGAAGCTCGATGAAATCATCGAGTTTTAGGATGGTAATAGGTTTTCAATCACTTATATTGACATAGATTAAAATTTTATTTCAAATGCTTTAGATCCGGTTTGATAACCATTTGGTTTTTTGTTTTTGATACAACACAATATGTATGTTGAATGATACAGATTATTTCTAGTGGGAATGCACATATATGGTAGGGGTGATTGGAAAAACATTGCAGACAACGTTGTGACTACAAGAACACACACTCAAGTCGCTAGCCATGCCCAAAAGTTCTTCCTTCACCACCAACACTCATTAGGACAAAAGCGAAAGAGGACGAGCATTCACGATATGAACACAGTCGACCCGGTATTATTGTCGCAAGTGCTTGCTCGCCTACAATCACCATCACCATCGCTACCGATGCCCACTGTTCAATAG

mRNA sequence

ATGGATACTCAAAACAACTTGCCTTCATCGTTTGGTCCTCCTCCTTCACCAATTCCACATTCTAATGAGAATCCAACGATGGAGATGAATATAGACGAGACACAACCCCACTCGTTTTCTTCATTCTTTTCGGGTGGTTGGACCGACAATGTGGTGTTCGAGCATGAGCCGCCAATGAGAAATCCGACAGTAGAGATTAGAGAGAATAATAATGTGACGAAGCAGAATCCAATGATCATGGATTCCTTTGCATTTGATCCAAATACTTGTAATAATAATAATGTTGTTAACCATAATTACATGTCCTTATTAATGGGAAACGATGAGGCTTCTTGGGATGACGAGTGCGTTGATATGTTGGATTTTTTTCCCAACAATAATATAGGCCAATGTTCTTATTCTAAATCTGAAACGCCGCAGTTTGATAATGCTTCTGCTTTCACTGATCAATCCACTTCCAACAACAACATCATGTCTGCTTCAAATCCATTATTGTCCAACGTTGTTGATCCTTATCTATCTTCCCAGAATGAGAAGACATCTCCTAATAACTTTTTGTCTGATCCCATGGGGCATACAGGTTTGCTTTCTGATGTCGTAAATTTTGATGCTGCAAGGAGCTTTGGAGATGTGACCACCATTAATGGCGAAGCCAAATCATCGGAGACCAAGAAGAACCGCAACCCTTGGAGTGAAGACGAGCACAAATTATTTCTAGTGGGAATGCACATATATGGTAGGGGTGATTGGAAAAACATTGCAGACAACGTTGTGACTACAAGAACACACACTCAAGTCGCTAGCCATGCCCAAAAGTTCTTCCTTCACCACCAACACTCATTAGGACAAAAGCGAAAGAGGACGAGCATTCACGATATGAACACAGTCGACCCGGTATTATTGTCGCAAGTGCTTGCTCGCCTACAATCACCATCACCATCGCTACCGATGCCCACTGTTCAATAG

Coding sequence (CDS)

ATGGATACTCAAAACAACTTGCCTTCATCGTTTGGTCCTCCTCCTTCACCAATTCCACATTCTAATGAGAATCCAACGATGGAGATGAATATAGACGAGACACAACCCCACTCGTTTTCTTCATTCTTTTCGGGTGGTTGGACCGACAATGTGGTGTTCGAGCATGAGCCGCCAATGAGAAATCCGACAGTAGAGATTAGAGAGAATAATAATGTGACGAAGCAGAATCCAATGATCATGGATTCCTTTGCATTTGATCCAAATACTTGTAATAATAATAATGTTGTTAACCATAATTACATGTCCTTATTAATGGGAAACGATGAGGCTTCTTGGGATGACGAGTGCGTTGATATGTTGGATTTTTTTCCCAACAATAATATAGGCCAATGTTCTTATTCTAAATCTGAAACGCCGCAGTTTGATAATGCTTCTGCTTTCACTGATCAATCCACTTCCAACAACAACATCATGTCTGCTTCAAATCCATTATTGTCCAACGTTGTTGATCCTTATCTATCTTCCCAGAATGAGAAGACATCTCCTAATAACTTTTTGTCTGATCCCATGGGGCATACAGGTTTGCTTTCTGATGTCGTAAATTTTGATGCTGCAAGGAGCTTTGGAGATGTGACCACCATTAATGGCGAAGCCAAATCATCGGAGACCAAGAAGAACCGCAACCCTTGGAGTGAAGACGAGCACAAATTATTTCTAGTGGGAATGCACATATATGGTAGGGGTGATTGGAAAAACATTGCAGACAACGTTGTGACTACAAGAACACACACTCAAGTCGCTAGCCATGCCCAAAAGTTCTTCCTTCACCACCAACACTCATTAGGACAAAAGCGAAAGAGGACGAGCATTCACGATATGAACACAGTCGACCCGGTATTATTGTCGCAAGTGCTTGCTCGCCTACAATCACCATCACCATCGCTACCGATGCCCACTGTTCAATAG

Protein sequence

MDTQNNLPSSFGPPPSPIPHSNENPTMEMNIDETQPHSFSSFFSGGWTDNVVFEHEPPMRNPTVEIRENNNVTKQNPMIMDSFAFDPNTCNNNNVVNHNYMSLLMGNDEASWDDECVDMLDFFPNNNIGQCSYSKSETPQFDNASAFTDQSTSNNNIMSASNPLLSNVVDPYLSSQNEKTSPNNFLSDPMGHTGLLSDVVNFDAARSFGDVTTINGEAKSSETKKNRNPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVLLSQVLARLQSPSPSLPMPTVQ

Homology

[Close]

BLAST of Lag0021736 vs. NCBI nr
Match: XP_023522314.1 (transcription factor SRM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-23
Identity = 74/147 (50.34%), Postives = 92/147 (62.59%), Query Frame = 0


Query: 181 SPNNFLSDPMGHTGLLSDVVNFDAARSFGDVTTINGEAKSSETKKNRNPWSEDEHKLFLV 240
           SP      PM  TG LSDV+NF +  +   V   NG  + S++ K R  W+ DEHKLFLV
Sbjct: 13  SPLALAPTPMESTGFLSDVINFCSNNTRHVVAANNG--RVSQSSKTRIIWTIDEHKLFLV 72

Query: 241 GMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVL 300
           GM I+G G+WK+IA+ VV T+TH QVASHAQKF    Q    ++RKR SIHD++TVDP L
Sbjct: 73  GMAIFGSGNWKSIANKVVLTKTHIQVASHAQKFSTRQQIP-KEQRKRKSIHDIDTVDPEL 132

Query: 301 LSQVLARLQS---------PSPSLPMP 319
           LS+V ARL+S         P P  P P
Sbjct: 133 LSEVYARLESQPETRTRSRPPPPPPPP 156

[Close]

BLAST of Lag0021736 vs. NCBI nr
Match: KAA0044592.1 (myb-like protein J [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 9.1e-21
Identity = 101/316 (31.96%), Postives = 145/316 (45.89%), Query Frame = 0


Query: 22  NENPTMEMNID--ETQPHSFSSFFSGGWTDNVVFEHE----------PPMRNPTVEIREN 81
           N  PT+   I+  E     FSS  SG WT+N    +           P    P ++  +N
Sbjct: 26  NSAPTLTSTINDHEMSRQLFSSIESGDWTNNEENHNHKRNLETTQCYPSSSTPFIDANDN 85

Query: 82  NNVTKQNPMIMDSFAFDPNTCNNNNVVNHNYM-SLLMGNDEASWDDECVDML---DFFPN 141
              T +      S + DPN+       N++ M    + +D  +     +      D F N
Sbjct: 86  FE-TPRYYHPSSSQSVDPNS-------NYSNMDDAFLFSDSLTCSPSILSTTHNKDSF-N 145

Query: 142 NNIGQCSYSKS--ETPQFDNASAFTDQSTSNNNIMSASNPLLSNVVDPYLSSQNEKTSPN 201
           ++IG   +      +     +S   D  T NN      NP  S+   P   S    T  N
Sbjct: 146 DSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSHFYSP---SSISTTHNN 205

Query: 202 NFLSDPMGHTGLLSDVVNF-----DAARSFGDVTTINGEAKSSETKKN------RNPWSE 261
           +  +D   +TGLLSD+V         + S  +++++     SS    N      RN WS 
Sbjct: 206 DQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSL 265

Query: 262 DEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHD 309
            EH+LFL GM + G+ +WK IAD+VV T+TH QVASHAQK+FLH       KRKR+SIHD
Sbjct: 266 KEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHD 325

[Close]

BLAST of Lag0021736 vs. NCBI nr
Match: XP_008454484.1 (PREDICTED: myb-like protein J [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 5.9e-20
Identity = 96/297 (32.32%), Postives = 138/297 (46.46%), Query Frame = 0


Query: 39  FSSFFSGGWTDN----------VVFEHEPPMRNPTVEIRENNNVTKQNPMIMDSFAFDPN 98
           FSS  SG WT+N             +  P    P ++  +N   T +      S + DPN
Sbjct: 6   FSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFE-TPRYYHPSSSQSVDPN 65

Query: 99  TCNNNNVVNHNYM-SLLMGNDEASWDDECVDML---DFFPNNNIGQCSYSKS--ETPQFD 158
           +       N++ M    + +D  +     +      D F N++IG   +      +    
Sbjct: 66  S-------NYSNMDDAFLFSDSLTCSPSILSTTHNKDSF-NDSIGHNGFLSDVVNSSSTK 125

Query: 159 NASAFTDQSTSNNNIMSASNPLLSNVVDPYLSSQNEKTSPNNFLSDPMGHTGLLSDVVNF 218
            +S   D  T NN      NP  S+   P   S    T  N+  +D   +TGLLSD+V  
Sbjct: 126 TSSKSLDSMTFNNRHSPYPNPQTSHFYSP---SSISTTHNNDQFADSTEYTGLLSDIVKM 185

Query: 219 -----DAARSFGDVTTINGEAKSSETKKN------RNPWSEDEHKLFLVGMHIYGRGDWK 278
                  + S  +++++     SS    N      RN WS  EH+LFL GM + G+ +WK
Sbjct: 186 RPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWK 245

Query: 279 NIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVLLSQVLARL 309
            IAD+VV T+TH QVASHAQK+FLH       KRKR+SIHD+ TV+P  L++V A L
Sbjct: 246 KIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACL 290

[Close]

BLAST of Lag0021736 vs. NCBI nr
Match: XP_022548770.1 (transcription factor DIVARICATA-like [Brassica napus])

HSP 1 Score: 107.1 bits (266), Expect = 2.9e-19
Identity = 58/116 (50.00%), Postives = 78/116 (67.24%), Query Frame = 0


Query: 192 HTGLLSDVVNFDAARSF------GDVTTINGEAKSSETKKNR-NPWSEDEHKLFLVGMHI 251
           +  L+ DV+  D+ R             I+ E+K  E ++ R  PWSE EHKLFLVG+  
Sbjct: 47  YEALVHDVIEIDSGRVHVPYYMDDSAGQISFESKHGENERKRGTPWSESEHKLFLVGLKR 106

Query: 252 YGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVL 301
           YG+GDW++I+ NVV TRT TQVASHAQK+FL  Q+S+ ++RKR+SIHD+ TVD  L
Sbjct: 107 YGKGDWRSISRNVVVTRTPTQVASHAQKYFL-RQNSVKKERKRSSIHDITTVDTSL 161

[Close]

BLAST of Lag0021736 vs. NCBI nr
Match: CAG7912005.1 (unnamed protein product, partial [Brassica rapa])

HSP 1 Score: 107.1 bits (266), Expect = 2.9e-19
Identity = 58/116 (50.00%), Postives = 78/116 (67.24%), Query Frame = 0


Query: 192 HTGLLSDVVNFDAARSF------GDVTTINGEAKSSETKKNR-NPWSEDEHKLFLVGMHI 251
           +  L+ DV+  D+ R             I+ E+K  E ++ R  PWSE EHKLFLVG+  
Sbjct: 58  YEALVHDVIEIDSGRVHVPYYMDDSAGQISFESKHGENERKRGTPWSESEHKLFLVGLKR 117

Query: 252 YGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVL 301
           YG+GDW++I+ NVV TRT TQVASHAQK+FL  Q+S+ ++RKR+SIHD+ TVD  L
Sbjct: 118 YGKGDWRSISRNVVVTRTPTQVASHAQKYFL-RQNSVKKERKRSSIHDITTVDTSL 172

[Close]

BLAST of Lag0021736 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.8e-18
Identity = 70/198 (35.35%), Postives = 102/198 (51.52%), Query Frame = 0


Query: 133 YSKSETPQFDNASAFTDQSTSNNNIMSAS---NPLLSNVVDPYLSSQNEKTS-------- 192
           ++ +E   F+NA A  D++T N     A       + +V+  Y   +++ +S        
Sbjct: 26  WTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAGFVPV 85

Query: 193 PNNFLSDPMG-HTGLLSDVVNFDAARSFGDVTTINGEAKSSETKKNRNPWSEDEHKLFLV 252
           P    S P     G       F  +   G   + +G     E KK   PW+E+EHKLFL+
Sbjct: 86  PGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKG-VPWTEEEHKLFLM 145

Query: 253 GMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVL 312
           G+  YG+GDW+NI+ N V TRT TQVASHAQK+F+  Q S G+ ++R SIHD+ TV+   
Sbjct: 146 GLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFI-RQLSGGKDKRRASIHDITTVN--- 205

Query: 313 LSQVLARLQSPSPSLPMP 319
               L+  Q+PSP    P
Sbjct: 206 ----LSDNQTPSPDNKKP 214

[Close]

BLAST of Lag0021736 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-17
Identity = 41/81 (50.62%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 216 GEAKSSETKKNRNPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFL 275
           G++KS + ++    W+EDEH+LFL+G+  YG+GDW++I+ N V TRT TQVASHAQK+F+
Sbjct: 106 GKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 165

Query: 276 HHQHSLGQKRKRTSIHDMNTV 297
              +S+ + R+R+SIHD+ +V
Sbjct: 166 -RLNSMNKDRRRSSIHDITSV 185

[Close]

BLAST of Lag0021736 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-16
Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 194 GLLSDVVNFDAARSFGDVTTINGEAKSSETKKNRNPWSEDEHKLFLVGMHIYGRGDWKNI 253
           G   DV +  A   +     + G + S E KK   PW+E+EH++FL+G+   G+GDW+ I
Sbjct: 63  GSPGDVPDHVAGDGYASEDFVAGSSSSRERKKG-TPWTEEEHRMFLLGLQKLGKGDWRGI 122

Query: 254 ADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDM 294
           + N VTTRT TQVASHAQK+F+  Q ++ ++++R+S+ DM
Sbjct: 123 SRNYVTTRTPTQVASHAQKYFI-RQSNVSRRKRRSSLFDM 160

[Close]

BLAST of Lag0021736 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16
Identity = 37/79 (46.84%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 218 AKSSETKKNRNPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFLHH 277
           +K+ + ++   PW+E+EH+LFL+G+  +G+GDW++I+ N V +RT TQVASHAQK+F+  
Sbjct: 132 SKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI-R 191

Query: 278 QHSLGQKRKRTSIHDMNTV 297
            +S+ + R+R+SIHD+ +V
Sbjct: 192 LNSMNRDRRRSSIHDITSV 209

[Close]

BLAST of Lag0021736 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16
Identity = 37/79 (46.84%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 218 AKSSETKKNRNPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFLHH 277
           +K+ + ++   PW+E+EH+LFL+G+  +G+GDW++I+ N V +RT TQVASHAQK+F+  
Sbjct: 132 SKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI-R 191

Query: 278 QHSLGQKRKRTSIHDMNTV 297
            +S+ + R+R+SIHD+ +V
Sbjct: 192 LNSMNRDRRRSSIHDITSV 209

[Close]

BLAST of Lag0021736 vs. ExPASy TrEMBL
Match: A0A5A7TMR3 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003420 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.4e-21
Identity = 101/316 (31.96%), Postives = 145/316 (45.89%), Query Frame = 0


Query: 22  NENPTMEMNID--ETQPHSFSSFFSGGWTDNVVFEHE----------PPMRNPTVEIREN 81
           N  PT+   I+  E     FSS  SG WT+N    +           P    P ++  +N
Sbjct: 26  NSAPTLTSTINDHEMSRQLFSSIESGDWTNNEENHNHKRNLETTQCYPSSSTPFIDANDN 85

Query: 82  NNVTKQNPMIMDSFAFDPNTCNNNNVVNHNYM-SLLMGNDEASWDDECVDML---DFFPN 141
              T +      S + DPN+       N++ M    + +D  +     +      D F N
Sbjct: 86  FE-TPRYYHPSSSQSVDPNS-------NYSNMDDAFLFSDSLTCSPSILSTTHNKDSF-N 145

Query: 142 NNIGQCSYSKS--ETPQFDNASAFTDQSTSNNNIMSASNPLLSNVVDPYLSSQNEKTSPN 201
           ++IG   +      +     +S   D  T NN      NP  S+   P   S    T  N
Sbjct: 146 DSIGHNGFLSDVVNSSSTKTSSKSLDSMTFNNRHSPYPNPQTSHFYSP---SSISTTHNN 205

Query: 202 NFLSDPMGHTGLLSDVVNF-----DAARSFGDVTTINGEAKSSETKKN------RNPWSE 261
           +  +D   +TGLLSD+V         + S  +++++     SS    N      RN WS 
Sbjct: 206 DQFADSTEYTGLLSDIVKMRPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSL 265

Query: 262 DEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHD 309
            EH+LFL GM + G+ +WK IAD+VV T+TH QVASHAQK+FLH       KRKR+SIHD
Sbjct: 266 KEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHD 325

[Close]

BLAST of Lag0021736 vs. ExPASy TrEMBL
Match: A0A1S3BZH7 (myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.9e-20
Identity = 96/297 (32.32%), Postives = 138/297 (46.46%), Query Frame = 0


Query: 39  FSSFFSGGWTDN----------VVFEHEPPMRNPTVEIRENNNVTKQNPMIMDSFAFDPN 98
           FSS  SG WT+N             +  P    P ++  +N   T +      S + DPN
Sbjct: 6   FSSIESGDWTNNEGNHNHKRNLKTTQCYPSSSTPFIDANDNFE-TPRYYHPSSSQSVDPN 65

Query: 99  TCNNNNVVNHNYM-SLLMGNDEASWDDECVDML---DFFPNNNIGQCSYSKS--ETPQFD 158
           +       N++ M    + +D  +     +      D F N++IG   +      +    
Sbjct: 66  S-------NYSNMDDAFLFSDSLTCSPSILSTTHNKDSF-NDSIGHNGFLSDVVNSSSTK 125

Query: 159 NASAFTDQSTSNNNIMSASNPLLSNVVDPYLSSQNEKTSPNNFLSDPMGHTGLLSDVVNF 218
            +S   D  T NN      NP  S+   P   S    T  N+  +D   +TGLLSD+V  
Sbjct: 126 TSSKSLDSMTFNNRHSPYPNPQTSHFYSP---SSISTTHNNDQFADSTEYTGLLSDIVKM 185

Query: 219 -----DAARSFGDVTTINGEAKSSETKKN------RNPWSEDEHKLFLVGMHIYGRGDWK 278
                  + S  +++++     SS    N      RN WS  EH+LFL GM + G+ +WK
Sbjct: 186 RPRVPTMSSSTTNLSSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWK 245

Query: 279 NIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVLLSQVLARL 309
            IAD+VV T+TH QVASHAQK+FLH       KRKR+SIHD+ TV+P  L++V A L
Sbjct: 246 KIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACL 290

[Close]

BLAST of Lag0021736 vs. ExPASy TrEMBL
Match: A0A3P6D4R0 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA10T45189Z PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-19
Identity = 58/116 (50.00%), Postives = 78/116 (67.24%), Query Frame = 0


Query: 192 HTGLLSDVVNFDAARSF------GDVTTINGEAKSSETKKNR-NPWSEDEHKLFLVGMHI 251
           +  L+ DV+  D+ R             I+ E+K  E ++ R  PWSE EHKLFLVG+  
Sbjct: 47  YEALVHDVIEIDSGRVHVPYYMDDSAGQISFESKHGENERKRGTPWSESEHKLFLVGLKR 106

Query: 252 YGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVL 301
           YG+GDW++I+ NVV TRT TQVASHAQK+FL  Q+S+ ++RKR+SIHD+ TVD  L
Sbjct: 107 YGKGDWRSISRNVVVTRTPTQVASHAQKYFL-RQNSVKKERKRSSIHDITTVDTSL 161

[Close]

BLAST of Lag0021736 vs. ExPASy TrEMBL
Match: A0A3P6EPX1 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC9T59955H PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-19
Identity = 57/116 (49.14%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 192 HTGLLSDVVNFDAARSF------GDVTTINGEAKSSETKKNR-NPWSEDEHKLFLVGMHI 251
           +  L+ DV+  ++ R             I+ E+K  E+++ R  PWSE EHKLFLVG+  
Sbjct: 47  YEALVHDVIEIESGRVHVPRYMDDSAVQISFESKHGESERKRGTPWSESEHKLFLVGLKR 106

Query: 252 YGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVL 301
           YG+GDW++I+ NVV TRT TQVASHAQK+FL  Q+S+ ++RKR+SIHD+ TVD  L
Sbjct: 107 YGKGDWRSISRNVVVTRTPTQVASHAQKYFL-RQNSVKKERKRSSIHDITTVDTSL 161

[Close]

BLAST of Lag0021736 vs. ExPASy TrEMBL
Match: A0A6J0MJ78 (transcription factor DIVARICATA-like OS=Raphanus sativus OX=3726 GN=LOC108843906 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-19
Identity = 53/96 (55.21%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 203 DAARSFGDVTTINGEAKSSETKKNR-NPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTR 262
           D+A  +     I+  +K  ET++ R  PWSE+EHKLFL+G+  YG+GDW++I+ NVV TR
Sbjct: 70  DSAAGWDSAGQISFGSKHGETERKRGTPWSENEHKLFLIGLKRYGKGDWRSISRNVVVTR 129

Query: 263 THTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVD 298
           T TQVASHAQK+FL  Q+S+ ++RKR+SIHD+ TVD
Sbjct: 130 TPTQVASHAQKYFL-RQNSVKKERKRSSIHDITTVD 164

[Close]

BLAST of Lag0021736 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-22
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 204 AARSFGDVTTINGEAKSSETKKNR-NPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRT 263
           AA  +     I+  +K  E+++ R  PW+E+EHKLFL+G+  YG+GDW++I+ NVV TRT
Sbjct: 74  AAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRT 133

Query: 264 HTQVASHAQKFFLHHQHSLGQKRKRTSIHDMNTVDPVL 301
            TQVASHAQK+FL  Q+S+ ++RKR+SIHD+ TVD  L
Sbjct: 134 PTQVASHAQKYFL-RQNSVKKERKRSSIHDITTVDATL 170

[Close]

BLAST of Lag0021736 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 92.4 bits (228), Expect = 7.0e-19
Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 216 GEAKSSETKKNRNPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFL 275
           G +   E KK   PW+E+EHKLFL+G+  YG+GDW+NI+ N V TRT TQVASHAQK+F+
Sbjct: 130 GRSPELERKKG-VPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFI 189

Query: 276 HHQHSLGQKRKRTSIHDMNTVD 298
             Q S G+ ++R SIHD+ TV+
Sbjct: 190 -RQLSGGKDKRRASIHDITTVN 209

[Close]

BLAST of Lag0021736 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18
Identity = 41/81 (50.62%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 216 GEAKSSETKKNRNPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFL 275
           G++KS + ++    W+EDEH+LFL+G+  YG+GDW++I+ N V TRT TQVASHAQK+F+
Sbjct: 106 GKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 165

Query: 276 HHQHSLGQKRKRTSIHDMNTV 297
              +S+ + R+R+SIHD+ +V
Sbjct: 166 -RLNSMNKDRRRSSIHDITSV 185

[Close]

BLAST of Lag0021736 vs. TAIR 10
Match: AT5G01200.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-18
Identity = 43/74 (58.11%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 224 KKNRNPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFFLHHQHSLGQ 283
           +K   PW+EDEH  FL+G+  YG+GDW+NIA + VTTRT TQVASHAQK+FL  Q + G+
Sbjct: 142 RKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFL-RQLTDGK 201

Query: 284 KRKRTSIHDMNTVD 298
            ++R+SIHD+ TV+
Sbjct: 202 DKRRSSIHDITTVN 214

[Close]

BLAST of Lag0021736 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-17
Identity = 38/83 (45.78%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 215 NGEAKSSETKKNRNPWSEDEHKLFLVGMHIYGRGDWKNIADNVVTTRTHTQVASHAQKFF 274
           +G +++ + ++   PW+E+EH+LFL+G+  +G+GDW++I+ N V +RT TQVASHAQK+F
Sbjct: 121 SGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 180

Query: 275 LHHQHSLGQKRKRTSIHDMNTVD 298
           +   +S+ + R+R+SIHD+ TV+
Sbjct: 181 I-RLNSMNRDRRRSSIHDITTVN 202

The following BLAST results are available for this feature:

BLAST of Lag0021736 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522314.1	1.1e-23	50.34	transcription factor SRM1-like [Cucurbita pepo subsp. pepo]	[more]
KAA0044592.1	9.1e-21	31.96	myb-like protein J [Cucumis melo var. makuwa]	[more]
XP_008454484.1	5.9e-20	32.32	PREDICTED: myb-like protein J [Cucumis melo]	[more]
XP_022548770.1	2.9e-19	50.00	transcription factor DIVARICATA-like [Brassica napus]	[more]
CAG7912005.1	2.9e-19	50.00	unnamed protein product, partial [Brassica rapa]	[more]

BLAST of Lag0021736 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9H7	9.8e-18	35.35	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q9FNN6	1.7e-17	50.62	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
Q9LVS0	2.4e-16	43.00	Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1	[more]
B8A9B2	7.0e-16	46.84	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	7.0e-16	46.84	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]

BLAST of Lag0021736 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMR3	4.4e-21	31.96	Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00...	[more]
A0A1S3BZH7	2.9e-20	32.32	myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1	[more]
A0A3P6D4R0	1.4e-19	50.00	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA10T45189Z PE=4 SV=...	[more]
A0A3P6EPX1	1.9e-19	49.14	Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC9T59955H PE=4 SV=1	[more]
A0A6J0MJ78	2.4e-19	55.21	transcription factor DIVARICATA-like OS=Raphanus sativus OX=3726 GN=LOC108843906...	[more]

BLAST of Lag0021736 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	3.0e-22	53.06	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	7.0e-19	56.10	Homeodomain-like transcriptional regulator	[more]
AT5G08520.1	1.2e-18	50.62	Duplicated homeodomain-like superfamily protein	[more]
AT5G01200.1	2.0e-18	58.11	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	1.0e-17	45.78	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 226..276 e-value: 1.9E-7 score: 40.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 222..274 score: 7.352057
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 229..274 e-value: 4.2407E-8 score: 46.7998
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 227..272 e-value: 9.2E-11 score: 41.8
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 224..278 score: 13.259068
None	No IPR available	GENE3D	1.10.10.60		coord: 228..279 e-value: 7.3E-15 score: 56.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 134..297
None	No IPR available	PANTHER	PTHR44191:SF46	TRANSCRIPTION FACTOR MYB1R1-LIKE	coord: 134..297
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 225..276 e-value: 9.4E-15 score: 52.7
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 225..278 score: 11.49113
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 223..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0021736.1	Lag0021736.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding