Lag0021569 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGAAGTAACTAAGAACACCAAGAGCATGAAAGAACGAAGCTCAAGCCACCAAAGCCTCCGCGTCCTCCTCCTCCTCGGCCATCTATATCTACTAATTTTTGACAACATGGTCGTCGTCGCACTCGGCAGCTCGATGGTCCCGTGCAACGGTACGATAGCAGAGTGCTACGAAGAGGAAGAGATGTTAATGGAGTCGGAGATAAGTCGAAGGTTTCTCGAACAACAAAGAAAGAAAATAACGTATCCTGCTCTGAGACCTGACAAACCTGCTTGTGATAATGGAGCCGTAGGTCAACCTTATGGCAAAAGCTGTGCTCCTTCTGTGGCTAATAAATATAACACAGGATCATGTGGTTCAGTATACAACAGAGGATGCCCTTCAAAAAATACTCCGGCGCGGCCTTAG ATGCAAGAAGTAACTAAGAACACCAAGAGCATGAAAGAACGAAGCTCAAGCCACCAAAGCCTCCGCGTCCTCCTCCTCCTCGGCCATCTATATCTACTAATTTTTGACAACATGGTCGTCGTCGCACTCGGCAGCTCGATGGTCCCGTGCAACGGTACGATAGCAGAGTGCTACGAAGAGGAAGAGATGTTAATGGAGTCGGAGATAAGTCGAAGGTTTCTCGAACAACAAAGAAAGAAAATAACGTATCCTGCTCTGAGACCTGACAAACCTGCTTGTGATAATGGAGCCGTAGGTCAACCTTATGGCAAAAGCTGTGCTCCTTCTGTGGCTAATAAATATAACACAGGATCATGTGGTTCAGTATACAACAGAGGATGCCCTTCAAAAAATACTCCGGCGCGGCCTTAG ATGCAAGAAGTAACTAAGAACACCAAGAGCATGAAAGAACGAAGCTCAAGCCACCAAAGCCTCCGCGTCCTCCTCCTCCTCGGCCATCTATATCTACTAATTTTTGACAACATGGTCGTCGTCGCACTCGGCAGCTCGATGGTCCCGTGCAACGGTACGATAGCAGAGTGCTACGAAGAGGAAGAGATGTTAATGGAGTCGGAGATAAGTCGAAGGTTTCTCGAACAACAAAGAAAGAAAATAACGTATCCTGCTCTGAGACCTGACAAACCTGCTTGTGATAATGGAGCCGTAGGTCAACCTTATGGCAAAAGCTGTGCTCCTTCTGTGGCTAATAAATATAACACAGGATCATGTGGTTCAGTATACAACAGAGGATGCCCTTCAAAAAATACTCCGGCGCGGCCTTAG MQEVTKNTKSMKERSSSHQSLRVLLLLGHLYLLIFDNMVVVALGSSMVPCNGTIAECYEEEEMLMESEISRRFLEQQRKKITYPALRPDKPACDNGAVGQPYGKSCAPSVANKYNTGSCGSVYNRGCPSKNTPARP Homology
BLAST of Lag0021569 vs. NCBI nr
Match: XP_004147646.3 (protein RALF-like 32 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 1.0e-18 Identity = 63/122 (51.64%), Postives = 80/122 (65.57%), Query Frame = 0
BLAST of Lag0021569 vs. NCBI nr
Match: XP_022138044.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 102.8 bits (255), Expect = 2.3e-18 Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0
BLAST of Lag0021569 vs. NCBI nr
Match: KAG6582109.1 (Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018526.1 Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 99.8 bits (247), Expect = 2.0e-17 Identity = 64/114 (56.14%), Postives = 75/114 (65.79%), Query Frame = 0
BLAST of Lag0021569 vs. NCBI nr
Match: XP_023528073.1 (protein RALF-like 32 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 97.1 bits (240), Expect = 1.3e-16 Identity = 55/96 (57.29%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Lag0021569 vs. NCBI nr
Match: XP_022138261.1 (protein RALF-like 32 [Momordica charantia]) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16 Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of Lag0021569 vs. ExPASy Swiss-Prot
Match: O23262 (Protein RALF-like 32 OS=Arabidopsis thaliana OX=3702 GN=RALFL32 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10 Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Lag0021569 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.3e-05 Identity = 34/85 (40.00%), Postives = 46/85 (54.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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