Lag0021430 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0021430
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ethylene-responsive transcription factor RAP2-3-like
Location	chr7: 7636928 .. 7637979 (+)
RNA-Seq Expression	Lag0021430
Synteny	Lag0021430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGGCGGAGCCATCATCTCCGACTTCGTCGACTGTGGGAAGCCCGTCGTCGACGATAACCTCTGGCCCGAGCTCGAAACCTTCTCCGACCTCCTCGGCCTCAGTCTCTCCGGTGAAAACTACCCCTTCAACCAGACTCCCCCCACAGCCGTCGAGAATCCCAAACAACCCCATGAAGGTACACTATTCTCTCCACTCTACAAAATTTTCTATTAATTCTGATATACTATTACTGAACTCAAAAGCTTAAGTTGACGATGGACTCATAACTTTAACAATCGTTAAATTAAGTCATGATTGTAAATATTAATTTGGATGAAAATAACATTACGTAAATTCTAATAGAGGATCTTTGGATAAATTAAACCAAAAAATTCAAGTAGATATATAGATTATGGTATATTTAATTTTTTATTGATATTCTTAACACTTCCTTTAAAGGTAAAAAAAGCAGTACAAAGTCCAATTGATATAAAAATTCCAAACTTAGGATTTGATGTTTTTGATGACAAATATTAAACAAACATTTGGGTATTCTTAATCTTTGATTTATATTCTTTTTAGTGAAAGTTGAGAGAGCAGAAGAGTATGAAGCAGCAGGGAAAAATGCAAATAAAATCGCAGTTGCAGGGGAAAAGAAGAAGCCTCAAAAGGTTCGCAAAAGCAAATACAGAGGAATCAGGCAGCGGCCATGGGGCAAATGGGCCGCCGAGATTCGAGACCCACAAAAGGGCGTCCGTGTTTGGCTTGGAACTTACAACACCGCCGAAGAAGCAGCCAGAGCCTACGACGAAGCCGCCAAAAGAATTAGAGGCAAAAAGGCCAAGCTCAACTTCACTCATCCGCCGTCGCCGTTGCCGCCGCCGCCACTTCCCCCGCAACCGCAGCTCCCGACCTCCTTCACCCCCACCGACATCGAACTCAAAGACCAAATCTCGAGCTTGGAGTCATTTCTGGGTCTCGACCCGTCACCGTCGGTGGAACCCACGGCTGACCTCTGGTGGGTCGACGACCTTCTTGCATATCAACAACAAAATCTCCAACTCTAA

mRNA sequence

ATGTGCGGCGGAGCCATCATCTCCGACTTCGTCGACTGTGGGAAGCCCGTCGTCGACGATAACCTCTGGCCCGAGCTCGAAACCTTCTCCGACCTCCTCGGCCTCAGTCTCTCCGGTGAAAACTACCCCTTCAACCAGACTCCCCCCACAGCCGTCGAGAATCCCAAACAACCCCATGAAGTGAAAGTTGAGAGAGCAGAAGAGTATGAAGCAGCAGGGAAAAATGCAAATAAAATCGCAGTTGCAGGGGAAAAGAAGAAGCCTCAAAAGGTTCGCAAAAGCAAATACAGAGGAATCAGGCAGCGGCCATGGGGCAAATGGGCCGCCGAGATTCGAGACCCACAAAAGGGCGTCCGTGTTTGGCTTGGAACTTACAACACCGCCGAAGAAGCAGCCAGAGCCTACGACGAAGCCGCCAAAAGAATTAGAGGCAAAAAGGCCAAGCTCAACTTCACTCATCCGCCGTCGCCGTTGCCGCCGCCGCCACTTCCCCCGCAACCGCAGCTCCCGACCTCCTTCACCCCCACCGACATCGAACTCAAAGACCAAATCTCGAGCTTGGAGTCATTTCTGGGTCTCGACCCGTCACCGTCGGTGGAACCCACGGCTGACCTCTGGTGGGTCGACGACCTTCTTGCATATCAACAACAAAATCTCCAACTCTAA

Coding sequence (CDS)

ATGTGCGGCGGAGCCATCATCTCCGACTTCGTCGACTGTGGGAAGCCCGTCGTCGACGATAACCTCTGGCCCGAGCTCGAAACCTTCTCCGACCTCCTCGGCCTCAGTCTCTCCGGTGAAAACTACCCCTTCAACCAGACTCCCCCCACAGCCGTCGAGAATCCCAAACAACCCCATGAAGTGAAAGTTGAGAGAGCAGAAGAGTATGAAGCAGCAGGGAAAAATGCAAATAAAATCGCAGTTGCAGGGGAAAAGAAGAAGCCTCAAAAGGTTCGCAAAAGCAAATACAGAGGAATCAGGCAGCGGCCATGGGGCAAATGGGCCGCCGAGATTCGAGACCCACAAAAGGGCGTCCGTGTTTGGCTTGGAACTTACAACACCGCCGAAGAAGCAGCCAGAGCCTACGACGAAGCCGCCAAAAGAATTAGAGGCAAAAAGGCCAAGCTCAACTTCACTCATCCGCCGTCGCCGTTGCCGCCGCCGCCACTTCCCCCGCAACCGCAGCTCCCGACCTCCTTCACCCCCACCGACATCGAACTCAAAGACCAAATCTCGAGCTTGGAGTCATTTCTGGGTCTCGACCCGTCACCGTCGGTGGAACCCACGGCTGACCTCTGGTGGGTCGACGACCTTCTTGCATATCAACAACAAAATCTCCAACTCTAA

Protein sequence

MCGGAIISDFVDCGKPVVDDNLWPELETFSDLLGLSLSGENYPFNQTPPTAVENPKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSPLPPPPLPPQPQLPTSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL

Homology

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BLAST of Lag0021430 vs. NCBI nr
Match: XP_038906638.1 (ethylene-responsive transcription factor RAP2-3 [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-76
Identity = 161/224 (71.88%), Postives = 176/224 (78.57%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELE-TFSDLLGLSLSGENYPFNQTPPTAV-ENPKQP 60
           MCGGAIISD+V+    VVD+ LWP L+ TFSDLLGL LSG+NYPFN TP   V E PKQ 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPNLDTTFSDLLGLDLSGQNYPFNNTPSNVVAETPKQL 60

Query: 61  HEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGV 120
            +VK E+ E  EA           G KKKPQK+RKSKYRGIRQRPWGKWAAEIRDPQKG+
Sbjct: 61  SQVKSEKVEGNEA----------VGGKKKPQKIRKSKYRGIRQRPWGKWAAEIRDPQKGL 120

Query: 121 RVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSPLPPPPLP---PQPQLPTSFTP 180
           RVWLGT+NTAEEAARAYD+AA RIRGKKAK NFTHPPSP   P LP   PQ QLPT+ +P
Sbjct: 121 RVWLGTFNTAEEAARAYDQAAIRIRGKKAKTNFTHPPSPTSLPLLPPSLPQQQLPTTSSP 180

Query: 181 T-DIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQN 219
           + DIELKDQIS+LESFLGLDPSP VEP ADLWWVDDL  YQQQN
Sbjct: 181 SFDIELKDQISTLESFLGLDPSPLVEPMADLWWVDDLFTYQQQN 214

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BLAST of Lag0021430 vs. NCBI nr
Match: XP_008438910.1 (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 1.7e-74
Identity = 170/237 (71.73%), Postives = 182/237 (76.79%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELET--FSDLLGLSLSG-ENYPFNQTPPTA--VEN- 60
           MCGGAIISD+V+    VVD+ LWP+L+T  FSDLLGL LSG +NY FN T P+A  V N 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  PKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120
           PKQ  +VK ER E  E A           E KKPQKVRKSKYRGIRQRPWGKWAAEIRDP
Sbjct: 61  PKQLSQVKKERVEGNEGA---------TSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120

Query: 121 QKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSP--LP-PPPLPP------ 180
           QKG+RVWLGTYNTAEEAARAYD+AA RIRGKKAKLNF HPP P  LP P PLPP      
Sbjct: 121 QKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQ 180

Query: 181 QPQLP-TSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL 222
           Q QLP TS TP D+ELK QIS+LESFLGLDPSP VEPTADLWWVDDLL YQQQNLQL
Sbjct: 181 QQQLPTTSATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

[Close]

BLAST of Lag0021430 vs. NCBI nr
Match: KAA0049520.1 (ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 288.9 bits (738), Expect = 3.7e-74
Identity = 169/237 (71.31%), Postives = 182/237 (76.79%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELET--FSDLLGLSLSG-ENYPFNQTPPTA--VEN- 60
           MCGGAIISD+V+    VVD+ LWP+L+T  FSDLLGL LSG +NY FN T P+A  V N 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  PKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120
           PKQ  +VK E+ E  E A           E KKPQKVRKSKYRGIRQRPWGKWAAEIRDP
Sbjct: 61  PKQLSQVKKEKVEGNEGA---------TSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120

Query: 121 QKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSP--LP-PPPLPP------ 180
           QKG+RVWLGTYNTAEEAARAYD+AA RIRGKKAKLNF HPP P  LP P PLPP      
Sbjct: 121 QKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQ 180

Query: 181 QPQLP-TSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL 222
           Q QLP TS TP D+ELK QIS+LESFLGLDPSP VEPTADLWWVDDLL YQQQNLQL
Sbjct: 181 QQQLPTTSATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

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BLAST of Lag0021430 vs. NCBI nr
Match: XP_004134228.1 (ethylene-responsive transcription factor RAP2-3 [Cucumis sativus] >KGN57139.1 hypothetical protein Csa_010229 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 3.2e-73
Identity = 162/235 (68.94%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELE-TFSDLLGLSL--SGENYPFNQ-TPPTAVEN-- 60
           MCGGAIISD+V+    VVD+ LWP+L+ TFSDLLGL L    +NYPFN  T P  V+N  
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 60

Query: 61  PKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120
           PKQ  +VK E+ E  E            GE KKPQKVRKSKYRGIRQRPWGKWAAEIRDP
Sbjct: 61  PKQLSQVKKEKVEGNEVG---------RGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120

Query: 121 QKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSPLPP--------PPLPPQ 180
           +KG+RVWLGTYNT EEAARAYD+AA RIRGKKAKLNF  PP P PP        PP PPQ
Sbjct: 121 RKGLRVWLGTYNTPEEAARAYDQAAIRIRGKKAKLNFP-PPLPSPPLLSVPLSLPPSPPQ 180

Query: 181 PQLPTSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL 222
            QLPT+ TP D+ELK QIS+LESFLGLDPSP VEPTADLWWVDDLLA QQQNLQL
Sbjct: 181 QQLPTTSTPIDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 225

[Close]

BLAST of Lag0021430 vs. NCBI nr
Match: XP_008438911.1 (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 5.4e-73
Identity = 164/234 (70.09%), Postives = 177/234 (75.64%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELET--FSDLLGLSLSG-ENYPFNQTPPTAVENPKQ 60
           MCGGAIISD+V+    VVD+ LWP+L+T  FSDLLGL LSG +NY FN T P+A      
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  PHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKG 120
           P ++  ER E  E A           E KKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKG
Sbjct: 61  PKQLSQERVEGNEGA---------TSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKG 120

Query: 121 VRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSP--LP-PPPLPP------QPQ 180
           +RVWLGTYNTAEEAARAYD+AA RIRGKKAKLNF HPP P  LP P PLPP      Q Q
Sbjct: 121 LRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQ 180

Query: 181 LP-TSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL 222
           LP TS TP D+ELK QIS+LESFLGLDPSP VEPTADLWWVDDLL YQQQNLQL
Sbjct: 181 LPTTSATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 225

[Close]

BLAST of Lag0021430 vs. ExPASy Swiss-Prot
Match: P42736 (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-34
Identity = 112/270 (41.48%), Postives = 140/270 (51.85%), Query Frame = 0


Query: 1   MCGGAIISDFVDC-----GKPVVDDNLWPELETFS--DLLGLSLSGENYPFNQTPPTAVE 60
           MCGGAIISD+        G+ +  + LW EL+  +  D  G   + + +P NQ       
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQV------ 60

Query: 61  NPKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRD 120
           N K+   VK E+A E              G+++K    RK+ YRGIR+RPWGKWAAEIRD
Sbjct: 61  NVKE-EAVKKEQATE-------------PGKRRK----RKNVYRGIRKRPWGKWAAEIRD 120

Query: 121 PQKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFT---HPPSP--LPPPPLP---- 180
           P+KGVRVWLGT+NTAEEAA AYD AAK+IRG KAKLNF    HPP P   PPP  P    
Sbjct: 121 PRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTD 180

Query: 181 -----------------PQPQLPT----------------SFTPTDIELKDQISSLESFL 214
                             QP  P                  F P D +LK QISSLESFL
Sbjct: 181 QPPAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEP-DYDLKQQISSLESFL 240

[Close]

BLAST of Lag0021430 vs. ExPASy Swiss-Prot
Match: Q9SSA8 (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-25
Identity = 77/186 (41.40%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 1   MCGGAIISDFV--DCGKPVVDDNLWPELETFSDLLGLSLSGENYP--------------- 60
           MCGGAIISDF+     + V  + +WP+L+   +L G   S +N                 
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLK--KNLKGSKKSSKNRSNFFDFDAEFEADFQG 60

Query: 61  ------------------FNQTPPTAVENPKQPHEVKVERAEEYEAAGKNANKIAVAGEK 120
                             F    P    +  +P    V  A E    GK    +    EK
Sbjct: 61  FKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKP---AVSAAAEGSVFGKKVTGLDGDAEK 120

Query: 121 KKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGVRVWLGTYNTAEEAARAYDEAAKRIRGK 152
              +K RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA+RIRG 
Sbjct: 121 SANRK-RKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGS 180

[Close]

BLAST of Lag0021430 vs. ExPASy Swiss-Prot
Match: Q9LUM4 (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 7.4e-25
Identity = 74/189 (39.15%), Postives = 96/189 (50.79%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKP--VVDDNLWPELET----------------------------FS 60
           MCGGAIISDF+   +   V ++ +WP+L+                             F 
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  DLLGLSLSGENYPFNQTPPTAVENPKQPHEVKVERAEEYEAAGKNANKIAVAGE--KKKP 120
           D        ++  F    P       +P          Y      A K   + E  +K  
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSS 120

Query: 121 QKVRKSKYRGIRQRPWGKWAAEIRDPQKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAK 158
           ++ RK++YRGIRQRPWGKWAAEIRDP+KG R WLGT++TAEEAARAYD AA+RIRG KAK
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAK 180

[Close]

BLAST of Lag0021430 vs. ExPASy Swiss-Prot
Match: Q6K7E6 (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.8e-24
Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 75  NANKIAVAG----EKKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGVRVWLGTYNTAEE 134
           N + I  AG      K  ++ RK+++RGIRQRPWGKWAAEIRDP+KGVRVWLGT+N+AEE
Sbjct: 95  NLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEE 154

Query: 135 AARAYDEAAKRIRGKKAKLNFTHPPS 157
           AARAYD  A+RIRGKKAK+NF   P+
Sbjct: 155 AARAYDAEARRIRGKKAKVNFPEAPT 180

[Close]

BLAST of Lag0021430 vs. ExPASy Swiss-Prot
Match: O22259 (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-24
Identity = 69/151 (45.70%), Postives = 84/151 (55.63%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELETFSDLLGLSLSGENYPFNQTPPTAVENPKQPHE 60
           MCGGAIISDF+           W + E+    LG                +V + K+   
Sbjct: 1   MCGGAIISDFI-----------WSKSESEPSQLG----------------SVSSRKKRKP 60

Query: 61  VKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGVRV 120
           V V                    E++  ++ RK+ YRGIRQRPWGKWAAEIRDP KGVRV
Sbjct: 61  VSV-------------------SEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRV 105

Query: 121 WLGTYNTAEEAARAYDEAAKRIRGKKAKLNF 152
           WLGT+ TA+EAARAYD AA +IRG+KAKLNF
Sbjct: 121 WLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105

[Close]

BLAST of Lag0021430 vs. ExPASy TrEMBL
Match: A0A1S3AY54 (ethylene-responsive transcription factor RAP2-3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483869 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 8.1e-75
Identity = 170/237 (71.73%), Postives = 182/237 (76.79%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELET--FSDLLGLSLSG-ENYPFNQTPPTA--VEN- 60
           MCGGAIISD+V+    VVD+ LWP+L+T  FSDLLGL LSG +NY FN T P+A  V N 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  PKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120
           PKQ  +VK ER E  E A           E KKPQKVRKSKYRGIRQRPWGKWAAEIRDP
Sbjct: 61  PKQLSQVKKERVEGNEGA---------TSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120

Query: 121 QKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSP--LP-PPPLPP------ 180
           QKG+RVWLGTYNTAEEAARAYD+AA RIRGKKAKLNF HPP P  LP P PLPP      
Sbjct: 121 QKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQ 180

Query: 181 QPQLP-TSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL 222
           Q QLP TS TP D+ELK QIS+LESFLGLDPSP VEPTADLWWVDDLL YQQQNLQL
Sbjct: 181 QQQLPTTSATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

[Close]

BLAST of Lag0021430 vs. ExPASy TrEMBL
Match: A0A5A7U2G6 (Ethylene-responsive transcription factor RAP2-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G007740 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.8e-74
Identity = 169/237 (71.31%), Postives = 182/237 (76.79%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELET--FSDLLGLSLSG-ENYPFNQTPPTA--VEN- 60
           MCGGAIISD+V+    VVD+ LWP+L+T  FSDLLGL LSG +NY FN T P+A  V N 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  PKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120
           PKQ  +VK E+ E  E A           E KKPQKVRKSKYRGIRQRPWGKWAAEIRDP
Sbjct: 61  PKQLSQVKKEKVEGNEGA---------TSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120

Query: 121 QKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSP--LP-PPPLPP------ 180
           QKG+RVWLGTYNTAEEAARAYD+AA RIRGKKAKLNF HPP P  LP P PLPP      
Sbjct: 121 QKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQ 180

Query: 181 QPQLP-TSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL 222
           Q QLP TS TP D+ELK QIS+LESFLGLDPSP VEPTADLWWVDDLL YQQQNLQL
Sbjct: 181 QQQLPTTSATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

[Close]

BLAST of Lag0021430 vs. ExPASy TrEMBL
Match: A0A0A0L7Z6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G164580 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 162/235 (68.94%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELE-TFSDLLGLSL--SGENYPFNQ-TPPTAVEN-- 60
           MCGGAIISD+V+    VVD+ LWP+L+ TFSDLLGL L    +NYPFN  T P  V+N  
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 60

Query: 61  PKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120
           PKQ  +VK E+ E  E            GE KKPQKVRKSKYRGIRQRPWGKWAAEIRDP
Sbjct: 61  PKQLSQVKKEKVEGNEVG---------RGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP 120

Query: 121 QKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSPLPP--------PPLPPQ 180
           +KG+RVWLGTYNT EEAARAYD+AA RIRGKKAKLNF  PP P PP        PP PPQ
Sbjct: 121 RKGLRVWLGTYNTPEEAARAYDQAAIRIRGKKAKLNFP-PPLPSPPLLSVPLSLPPSPPQ 180

Query: 181 PQLPTSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL 222
            QLPT+ TP D+ELK QIS+LESFLGLDPSP VEPTADLWWVDDLLA QQQNLQL
Sbjct: 181 QQLPTTSTPIDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 225

[Close]

BLAST of Lag0021430 vs. ExPASy TrEMBL
Match: A0A1S3AY72 (ethylene-responsive transcription factor RAP2-3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483869 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.6e-73
Identity = 164/234 (70.09%), Postives = 177/234 (75.64%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKPVVDDNLWPELET--FSDLLGLSLSG-ENYPFNQTPPTAVENPKQ 60
           MCGGAIISD+V+    VVD+ LWP+L+T  FSDLLGL LSG +NY FN T P+A      
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  PHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKG 120
           P ++  ER E  E A           E KKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKG
Sbjct: 61  PKQLSQERVEGNEGA---------TSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKG 120

Query: 121 VRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSP--LP-PPPLPP------QPQ 180
           +RVWLGTYNTAEEAARAYD+AA RIRGKKAKLNF HPP P  LP P PLPP      Q Q
Sbjct: 121 LRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQ 180

Query: 181 LP-TSFTPTDIELKDQISSLESFLGLDPSPSVEPTADLWWVDDLLAYQQQNLQL 222
           LP TS TP D+ELK QIS+LESFLGLDPSP VEPTADLWWVDDLL YQQQNLQL
Sbjct: 181 LPTTSATPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 225

[Close]

BLAST of Lag0021430 vs. ExPASy TrEMBL
Match: A0A6J1C807 (ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3673 GN=LOC111009221 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.7e-64
Identity = 145/227 (63.88%), Postives = 156/227 (68.72%), Query Frame = 0


Query: 1   MCGGAIISDFVDC---GKPVVDDNLWPELETFSDLLGLSLSGENYPFNQTPPTAVENPKQ 60
           MCGGAIISDFVD      PVVDDNLWPE +TFS+LLGL  S  NY FN +P     N +Q
Sbjct: 1   MCGGAIISDFVDTTCHQSPVVDDNLWPEFDTFSELLGLDASTGNYLFNNSPTN--NNLQQ 60

Query: 61  PHEVKVERAEEYEAAGKNANKIAVAGEKKKPQK--VRKSKYRGIRQRPWGKWAAEIRDPQ 120
              VK E+ EE E AG    +      KK+PQK  VRKSKYRGIRQRPWGKWAAEIRDPQ
Sbjct: 61  HSHVKSEKKEECEEAGGEVAEAVAEEMKKRPQKQRVRKSKYRGIRQRPWGKWAAEIRDPQ 120

Query: 121 KGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFTHPPSPLPPPPLPPQPQLPTSFTP 180
           KG+RVWLGT+NTAEEAA AYD+AA RIRGKKAKLNFTHPP   PPPP             
Sbjct: 121 KGLRVWLGTFNTAEEAAAAYDQAAIRIRGKKAKLNFTHPPPSPPPPPAV----------- 180

Query: 181 TDIELKDQISSLESFLGLDPS-PSVEPTADLWWVDDLLAYQQQNLQL 222
                  Q+SSLESFLGLDPS P VEP ADLWW DDLL Y  QNL L
Sbjct: 181 -------QLSSLESFLGLDPSPPPVEPMADLWWADDLLTYHHQNLPL 207

[Close]

BLAST of Lag0021430 vs. TAIR 10
Match: AT3G16770.1 (ethylene-responsive element binding protein )

HSP 1 Score: 148.3 bits (373), Expect = 7.3e-36
Identity = 112/270 (41.48%), Postives = 140/270 (51.85%), Query Frame = 0


Query: 1   MCGGAIISDFVDC-----GKPVVDDNLWPELETFS--DLLGLSLSGENYPFNQTPPTAVE 60
           MCGGAIISD+        G+ +  + LW EL+  +  D  G   + + +P NQ       
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQV------ 60

Query: 61  NPKQPHEVKVERAEEYEAAGKNANKIAVAGEKKKPQKVRKSKYRGIRQRPWGKWAAEIRD 120
           N K+   VK E+A E              G+++K    RK+ YRGIR+RPWGKWAAEIRD
Sbjct: 61  NVKE-EAVKKEQATE-------------PGKRRK----RKNVYRGIRKRPWGKWAAEIRD 120

Query: 121 PQKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLNFT---HPPSP--LPPPPLP---- 180
           P+KGVRVWLGT+NTAEEAA AYD AAK+IRG KAKLNF    HPP P   PPP  P    
Sbjct: 121 PRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTD 180

Query: 181 -----------------PQPQLPT----------------SFTPTDIELKDQISSLESFL 214
                             QP  P                  F P D +LK QISSLESFL
Sbjct: 181 QPPAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEP-DYDLKQQISSLESFL 240

[Close]

BLAST of Lag0021430 vs. TAIR 10
Match: AT1G53910.1 (related to AP2 12 )

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26
Identity = 77/186 (41.40%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 1   MCGGAIISDFV--DCGKPVVDDNLWPELETFSDLLGLSLSGENYP--------------- 60
           MCGGAIISDF+     + V  + +WP+L+   +L G   S +N                 
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLK--KNLKGSKKSSKNRSNFFDFDAEFEADFQG 60

Query: 61  ------------------FNQTPPTAVENPKQPHEVKVERAEEYEAAGKNANKIAVAGEK 120
                             F    P    +  +P    V  A E    GK    +    EK
Sbjct: 61  FKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKP---AVSAAAEGSVFGKKVTGLDGDAEK 120

Query: 121 KKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGVRVWLGTYNTAEEAARAYDEAAKRIRGK 152
              +K RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA+RIRG 
Sbjct: 121 SANRK-RKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGS 180

[Close]

BLAST of Lag0021430 vs. TAIR 10
Match: AT1G53910.2 (related to AP2 12 )

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26
Identity = 77/186 (41.40%), Postives = 97/186 (52.15%), Query Frame = 0


Query: 1   MCGGAIISDFV--DCGKPVVDDNLWPELETFSDLLGLSLSGENYP--------------- 60
           MCGGAIISDF+     + V  + +WP+L+   +L G   S +N                 
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLK--KNLKGSKKSSKNRSNFFDFDAEFEADFQG 60

Query: 61  ------------------FNQTPPTAVENPKQPHEVKVERAEEYEAAGKNANKIAVAGEK 120
                             F    P    +  +P    V  A E    GK    +    EK
Sbjct: 61  FKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKP---AVSAAAEGSVFGKKVTGLDGDAEK 120

Query: 121 KKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGVRVWLGTYNTAEEAARAYDEAAKRIRGK 152
              +K RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA+RIRG 
Sbjct: 121 SANRK-RKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGS 180

[Close]

BLAST of Lag0021430 vs. TAIR 10
Match: AT1G53910.3 (related to AP2 12 )

HSP 1 Score: 115.5 bits (288), Expect = 5.3e-26
Identity = 75/181 (41.44%), Postives = 98/181 (54.14%), Query Frame = 0


Query: 1   MCGGAIISDFV--DCGKPVVDDNLWPELETFSDLLGLSLSGEN----YPFNQTPPTAVEN 60
           MCGGAIISDF+     + V  + +WP+L+   +L G   S +N    + F+       + 
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLK--KNLKGSKKSSKNRSNFFDFDAEFEADFQG 60

Query: 61  PKQPHEV------------------------KVERAEEYEAAGKNANKIAVAGEKKKPQK 120
            K    +                        K   +   E  GK    +    EK   +K
Sbjct: 61  FKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEVFGKKVTGLDGDAEKSANRK 120

Query: 121 VRKSKYRGIRQRPWGKWAAEIRDPQKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAKLN 152
            RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA+RIRG KAK+N
Sbjct: 121 -RKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVN 178

[Close]

BLAST of Lag0021430 vs. TAIR 10
Match: AT3G14230.1 (related to AP2 2 )

HSP 1 Score: 115.5 bits (288), Expect = 5.3e-26
Identity = 74/189 (39.15%), Postives = 96/189 (50.79%), Query Frame = 0


Query: 1   MCGGAIISDFVDCGKP--VVDDNLWPELET----------------------------FS 60
           MCGGAIISDF+   +   V ++ +WP+L+                             F 
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  DLLGLSLSGENYPFNQTPPTAVENPKQPHEVKVERAEEYEAAGKNANKIAVAGE--KKKP 120
           D        ++  F    P       +P          Y      A K   + E  +K  
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSS 120

Query: 121 QKVRKSKYRGIRQRPWGKWAAEIRDPQKGVRVWLGTYNTAEEAARAYDEAAKRIRGKKAK 158
           ++ RK++YRGIRQRPWGKWAAEIRDP+KG R WLGT++TAEEAARAYD AA+RIRG KAK
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAK 180

The following BLAST results are available for this feature:

BLAST of Lag0021430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906638.1	2.3e-76	71.88	ethylene-responsive transcription factor RAP2-3 [Benincasa hispida]	[more]
XP_008438910.1	1.7e-74	71.73	PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis m...	[more]
KAA0049520.1	3.7e-74	71.31	ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo var. ma...	[more]
XP_004134228.1	3.2e-73	68.94	ethylene-responsive transcription factor RAP2-3 [Cucumis sativus] >KGN57139.1 hy...	[more]
XP_008438911.1	5.4e-73	70.09	PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis m...	[more]

BLAST of Lag0021430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42736	1.0e-34	41.48	Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SSA8	1.5e-25	41.40	Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LUM4	7.4e-25	39.15	Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6K7E6	4.8e-24	65.12	Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39...	[more]
O22259	6.3e-24	45.70	Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lag0021430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AY54	8.1e-75	71.73	ethylene-responsive transcription factor RAP2-3 isoform X1 OS=Cucumis melo OX=36...	[more]
A0A5A7U2G6	1.8e-74	71.31	Ethylene-responsive transcription factor RAP2-3 isoform X1 OS=Cucumis melo var. ...	[more]
A0A0A0L7Z6	1.5e-73	68.94	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G164580 PE=...	[more]
A0A1S3AY72	2.6e-73	70.09	ethylene-responsive transcription factor RAP2-3 isoform X2 OS=Cucumis melo OX=36...	[more]
A0A6J1C807	1.7e-64	63.88	ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3...	[more]

BLAST of Lag0021430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16770.1	7.3e-36	41.48	ethylene-responsive element binding protein	[more]
AT1G53910.1	1.1e-26	41.40	related to AP2 12	[more]
AT1G53910.2	1.1e-26	41.40	related to AP2 12	[more]
AT1G53910.3	5.3e-26	41.44	related to AP2 12	[more]
AT3G14230.1	5.3e-26	39.15	related to AP2 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..171
None	No IPR available	PANTHER	PTHR31190:SF210	EREBP TRANSCRIPTION FACTOR	coord: 1..154
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 96..107 score: 70.45 coord: 118..134 score: 69.73
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 95..158 e-value: 8.4E-40 score: 148.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 94..144 e-value: 1.3E-15 score: 57.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 95..152 score: 24.078365
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 94..153 e-value: 3.07183E-35 score: 117.373
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 94..153 e-value: 1.1E-26 score: 94.7
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 1..154
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 94..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0021430.1	Lag0021430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity