Lag0021384 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0021384
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	phosphopantetheine adenylyltransferase
Location	chr7: 7118088 .. 7118841 (-)
RNA-Seq Expression	Lag0021384
Synteny	Lag0021384

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATTGCTTTTCAATTGGCTGAATCTTTGGATAATGCGGTGAGAGAAAATAATGTCATTCATAAATTATATGCTTTTGAAAATTTGTTTCACTTTCAACTGTATCTTTGCAGCATGGCCTAGATTCCATGGACCATAAAGTATACTTCTTGCATATGGTCATGAAAATGAAGTTTGTTCCTCGTTGATTCCGTTTCATATCTTTTGGATAAATGTTATTTTCATTGCTGGTTGCATTTCTCAAGTCATGTCGTCAGACAATTTTTGCAGTCTGTGAAGCCTGCGCTGTTGGTACACGTCGAACCTATTGTCGATCCATATGGTCCATCCATTGTTGATGAAACTTTGGAGGCAATTGTTGTCAGGTTTCTCCATCAGCGTTTTATTTTCTACTAAATCCTCAATATTCACTGTGAATGTGATGTTATTCTTTATCCAAGCTGAATGACACTTCCTGGGTTATTCCTTTTCCAGCAAAGAGACGTTAGCAGGTGGAATGTCAGTTAACAAGAAGCGAGGCGAGAATGGCCTTTCGCAACTGAAGGTCCGAGTCTTTCGTCGTCGTCGTCTTTGTTTGCAGTACAAAAGATTCTATACTGAGATTGAGCCATTTGGTGTTTTCTGTGTGCAGATTGAAGTTGTGGATTTAGTTACTGGGGAATCTGGTGAAGATAAGTTGAGTTCATCAACACTAAGAAAGCTTGAGGCAGAGAAGGCTGCCTCTTCTTCCTTGCAGCAACAGACAGAGTAG

mRNA sequence

ATGACTATTGCTTTTCAATTGGCTGAATCTTTGGATAATGCGTCTGTGAAGCCTGCGCTGTTGGTACACGTCGAACCTATTGTCGATCCATATGGTCCATCCATTGTTGATGAAACTTTGGAGGCAATTGTTGTCAGCAAAGAGACGTTAGCAGGTGGAATGTCAGTTAACAAGAAGCGAGGCGAGAATGGCCTTTCGCAACTGAAGATTGAAGTTGTGGATTTAGTTACTGGGGAATCTGGTGAAGATAAGTTGAGTTCATCAACACTAAGAAAGCTTGAGGCAGAGAAGGCTGCCTCTTCTTCCTTGCAGCAACAGACAGAGTAG

Coding sequence (CDS)

ATGACTATTGCTTTTCAATTGGCTGAATCTTTGGATAATGCGTCTGTGAAGCCTGCGCTGTTGGTACACGTCGAACCTATTGTCGATCCATATGGTCCATCCATTGTTGATGAAACTTTGGAGGCAATTGTTGTCAGCAAAGAGACGTTAGCAGGTGGAATGTCAGTTAACAAGAAGCGAGGCGAGAATGGCCTTTCGCAACTGAAGATTGAAGTTGTGGATTTAGTTACTGGGGAATCTGGTGAAGATAAGTTGAGTTCATCAACACTAAGAAAGCTTGAGGCAGAGAAGGCTGCCTCTTCTTCCTTGCAGCAACAGACAGAGTAG

Protein sequence

MTIAFQLAESLDNASVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVDLVTGESGEDKLSSSTLRKLEAEKAASSSLQQQTE

Homology

[Close]

BLAST of Lag0021384 vs. NCBI nr
Match: KAG7028970.1 (Phosphopantetheine adenylyltransferase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 85/93 (91.40%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 15  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVD 74
           SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGE GL  LKIEVVD
Sbjct: 597 SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGEKGLPLLKIEVVD 656

Query: 75  LVTGESGEDKLSSSTLRKLEAEKAASSSLQQQT 108
           LVT ESG DKLSSSTLRKLEAEKAA  +LQQQT
Sbjct: 657 LVTEESGGDKLSSSTLRKLEAEKAA-PALQQQT 688

[Close]

BLAST of Lag0021384 vs. NCBI nr
Match: XP_022947987.1 (phosphopantetheine adenylyltransferase isoform X1 [Cucurbita moschata] >XP_022947994.1 phosphopantetheine adenylyltransferase isoform X1 [Cucurbita moschata])

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 85/93 (91.40%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 15  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVD 74
           SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGE GL  LKIEVVD
Sbjct: 94  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGEKGLPLLKIEVVD 153

Query: 75  LVTGESGEDKLSSSTLRKLEAEKAASSSLQQQT 108
           LVT ESG DKLSSSTLRKLEAEKAA  +LQQQT
Sbjct: 154 LVTEESGGDKLSSSTLRKLEAEKAA-PALQQQT 185

[Close]

BLAST of Lag0021384 vs. NCBI nr
Match: XP_022948003.1 (phosphopantetheine adenylyltransferase isoform X2 [Cucurbita moschata] >XP_022948012.1 phosphopantetheine adenylyltransferase isoform X2 [Cucurbita moschata])

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 85/93 (91.40%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 15  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVD 74
           SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGE GL  LKIEVVD
Sbjct: 85  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGEKGLPLLKIEVVD 144

Query: 75  LVTGESGEDKLSSSTLRKLEAEKAASSSLQQQT 108
           LVT ESG DKLSSSTLRKLEAEKAA  +LQQQT
Sbjct: 145 LVTEESGGDKLSSSTLRKLEAEKAA-PALQQQT 176

[Close]

BLAST of Lag0021384 vs. NCBI nr
Match: XP_022137784.1 (phosphopantetheine adenylyltransferase [Momordica charantia])

HSP 1 Score: 148.3 bits (373), Expect = 3.9e-32
Identity = 81/86 (94.19%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 15  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVD 74
           SVKP LLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGE GLSQLKIEVVD
Sbjct: 85  SVKPELLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGEKGLSQLKIEVVD 144

Query: 75  LVTGESGEDKLSSSTLRKLEAEKAAS 101
           LVT ESG DKLSSSTLRK EAEKAAS
Sbjct: 145 LVTDESGGDKLSSSTLRKFEAEKAAS 170

[Close]

BLAST of Lag0021384 vs. NCBI nr
Match: XP_022973783.1 (phosphopantetheine adenylyltransferase [Cucurbita maxima] >XP_022973784.1 phosphopantetheine adenylyltransferase [Cucurbita maxima] >XP_022973785.1 phosphopantetheine adenylyltransferase [Cucurbita maxima] >XP_022973786.1 phosphopantetheine adenylyltransferase [Cucurbita maxima] >XP_022973787.1 phosphopantetheine adenylyltransferase [Cucurbita maxima])

HSP 1 Score: 147.9 bits (372), Expect = 5.0e-32
Identity = 84/93 (90.32%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 15  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVD 74
           SVKPALLVHVEPIVDPYGPS+VD+TLEAIVVSKETLAGGMSVNKKRGENGL  LKIEVVD
Sbjct: 85  SVKPALLVHVEPIVDPYGPSVVDKTLEAIVVSKETLAGGMSVNKKRGENGLPLLKIEVVD 144

Query: 75  LVTGESGEDKLSSSTLRKLEAEKAASSSLQQQT 108
           LVT ESG DKLSSSTLRKLEAEKAA   LQQQT
Sbjct: 145 LVTEESGGDKLSSSTLRKLEAEKAA-PVLQQQT 176

[Close]

BLAST of Lag0021384 vs. ExPASy Swiss-Prot
Match: Q9ZPV8 (Phosphopantetheine adenylyltransferase OS=Arabidopsis thaliana OX=3702 GN=COAD PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-26
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 0


Query: 15  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVD 74
           S+KP L+V  EPI DPYGPSIVDE LEAIVVSKETL GG+SVN+KR E GLSQLKIEVV+
Sbjct: 81  SIKPELVVQAEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNRKRAERGLSQLKIEVVE 140

Query: 75  LVTGESGEDKLSSSTLRKLEAEKAA 100
           +V+  S  +K+SSSTLRK+EAEKA+
Sbjct: 141 IVSDGSSGNKISSSTLRKMEAEKAS 165

[Close]

BLAST of Lag0021384 vs. ExPASy Swiss-Prot
Match: Q6ZLC4 (Phosphopantetheine adenylyltransferase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0179400 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 58/84 (69.05%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 15  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVD 74
           SVKP L+V VEPI DPYGPSI+D+ L+AI+VSKETL GG +VN+KR E GL  LK+EVVD
Sbjct: 93  SVKPELVVQVEPIEDPYGPSIIDDKLDAIIVSKETLNGGFAVNRKREEKGLPLLKVEVVD 152

Query: 75  LVTGESGEDKLSSSTLRKLEAEKA 99
           L++G +  +KLSSS LRKLEAEKA
Sbjct: 153 LLSGGAEGEKLSSSALRKLEAEKA 176

[Close]

BLAST of Lag0021384 vs. ExPASy Swiss-Prot
Match: B9F2L1 (Phosphopantetheine adenylyltransferase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0134000 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.9e-23
Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 15  SVKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVD 74
           S+KP L VHVEPIVDP+GPSIVDE LEAI+VSKETL GG++VN+KR E GL+QL+IEVV+
Sbjct: 114 SIKPDLEVHVEPIVDPFGPSIVDEALEAIIVSKETLPGGLAVNRKRAERGLAQLEIEVVE 173

Query: 75  LVTGESGEDKLSSSTLRKLEAEKAASSSLQQ 106
           LV  +S  +K+SS+  RK EAE+      Q+
Sbjct: 174 LVPEKSTGNKISSTAFRKKEAERELHKQQQE 204

[Close]

BLAST of Lag0021384 vs. ExPASy Swiss-Prot
Match: Q9DBL7 (Bifunctional coenzyme A synthase OS=Mus musculus OX=10090 GN=Coasy PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 8.7e-11
Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 16  VKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVVDL 75
           +KP+L   + P++DPYGP+  D TLE +VVS+ET  GGM+VN+ R ENG  +L +  + L
Sbjct: 257 IKPSLTFELVPLLDPYGPAGSDPTLEFLVVSEETYRGGMAVNRFRLENGKEELALYQIQL 316

Query: 76  VT----GESGEDKLSSSTLRK 93
           +      E+ EDK+SSS+ R+
Sbjct: 317 LKDQSHNENEEDKVSSSSFRQ 337

[Close]

BLAST of Lag0021384 vs. ExPASy Swiss-Prot
Match: Q8MIR4 (Bifunctional coenzyme A synthase OS=Sus scrofa OX=9823 GN=COASY PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 16  VKPALLVHVEPIVDPYGPSIVDETLEAIVVSKETLAGGMSVNKKRGENGLSQLKIEVV-- 75
           +KP+L   + P++DPYGP+  D +LE +VVS+ET  GGM+VN+ R ENGL +L +  +  
Sbjct: 257 IKPSLSFDLIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAVNRFRLENGLEELTLYQIQL 316

Query: 76  --DLVTGESGEDKLSSSTLRK 93
             DL   E+ EDK+SSS+ R+
Sbjct: 317 LKDLNPKENEEDKVSSSSFRQ 337

The following BLAST results are available for this feature:

BLAST of Lag0021384 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028970.1	3.0e-32	91.40	Phosphopantetheine adenylyltransferase [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022947987.1	3.0e-32	91.40	phosphopantetheine adenylyltransferase isoform X1 [Cucurbita moschata] >XP_02294...	[more]
XP_022948003.1	3.0e-32	91.40	phosphopantetheine adenylyltransferase isoform X2 [Cucurbita moschata] >XP_02294...	[more]
XP_022137784.1	3.9e-32	94.19	phosphopantetheine adenylyltransferase [Momordica charantia]	[more]
XP_022973783.1	5.0e-32	90.32	phosphopantetheine adenylyltransferase [Cucurbita maxima] >XP_022973784.1 phosph...	[more]

BLAST of Lag0021384 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPV8	3.3e-26	72.94	Phosphopantetheine adenylyltransferase OS=Arabidopsis thaliana OX=3702 GN=COAD P...	[more]
Q6ZLC4	1.2e-23	69.05	Phosphopantetheine adenylyltransferase 1 OS=Oryza sativa subsp. japonica OX=3994...	[more]
B9F2L1	9.9e-23	62.64	Phosphopantetheine adenylyltransferase 2 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9DBL7	8.7e-11	45.68	Bifunctional coenzyme A synthase OS=Mus musculus OX=10090 GN=Coasy PE=1 SV=2	[more]
Q8MIR4	1.1e-10	46.91	Bifunctional coenzyme A synthase OS=Sus scrofa OX=9823 GN=COASY PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 5..101 e-value: 6.4E-19 score: 70.5
None	No IPR available	PANTHER	PTHR10695	DEPHOSPHO-COA KINASE-RELATED	coord: 15..102
None	No IPR available	PANTHER	PTHR10695:SF50	PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE	coord: 15..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0021384.1	Lag0021384.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0019915	lipid storage
biological_process	GO:0016310	phosphorylation
biological_process	GO:0080020	regulation of coenzyme A biosynthetic process
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0004140	dephospho-CoA kinase activity
molecular_function	GO:0004595	pantetheine-phosphate adenylyltransferase activity