Lag0021130 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0021130
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotran_gag_3 domain-containing protein
Location	chr7: 4907323 .. 4909553 (+)
RNA-Seq Expression	Lag0021130
Synteny	Lag0021130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGATCAAGCGTTAATTACACTGATCAATGCAACCTTGACGCAAACCGCCCTCTCTTATGTAATCGGTTGTCAAACCTCCAAGGAAGTTTGGGATCGACTTGAGAAGCACTTCTCCTCTTCGACTCAAACGAACATTGTAGGTGTGAAGACAAAGTTGCAAAGTGTTTCAAAGAAATCCGGTGAGTCAATTGATGTTTATGTTCGAAGAATCAAGGAAATTGTGAACAAATTGGTTGCGGTGTCGGTAGTTATTGATGCTGAAGATCTCAATATTTACACTATTAATGGCCTTTCATCTGCTTACAATGTTTTCAAGACCTCTTTATGCACCAGATCTCAAGCCCTAACATTTGTCGAGTTACATATCCTGATGAAGACTGAGGAGACTGCACTTGAACAACAAATAAAAGCTGATGAAATCCCGAATAATTCTCATTTGGCCATGGCGGCTAGTTTTGATTTTGGTGGCAGAGGAAATTGGAGAGGTCGTTTTGATGGAAATCGAAATGGAGGTAGAGGTCGTGGTACTTCTTTTTCCTCTCAGATTACTACTCCTTCATCTCATGGTCAGTTTTCTTCCTCTCCTTCATTTGATGGCAGTCGTCCGCCGAACAAAGTTACCTGTCAAATTTTTCAGAAATACGGCCACAATGCCCTAGACTGTTATAACATAATGAATCACCTTTCGTATACTCCACTCGTTCCCTTCGCCTTCGTAAGTAAGCTATTTTTTATCCGTAGATTGATTGTGAGTGAGCTTCCTATCAAGGCAGACATCCACCAGCTAAGCTTGCAGCAATGGCTACCTTTGCTCCGTCAAACAATTTGGCTCATAATTTTGTTTCTAATGTTGCACCCTCTGACTCACATGTTTGGCTTTCTGACACAGGCTGCAATGCACATTTGACTCATAATCTTGCCAATTTGAGTGTGTCCAATGCATACAATGGGGAAGAGAACATCACTGTTGGTAATGGTCAGTCACTCTCTATCTCTCATCAAGGTTCTGGCCAACTTTCTCTTCCACATACTTCTTTTACTTTGTCAAATCTTTTTCGTGTCCCTAACAGCTCCACCAATCTTCTATTTGTTCACCAATTTGAGTTGAACTAATTAGGATTTTGCAACAGAAATGAGATCTGCCTCCATTTTCCACTGCACCCGAGGTTGGGCATGTCAAAAGGACCCGTATTGGTCTATGGGGACAATCTTTGTTCATAGAAGCAGTTCAAGACTAGTAAGGTAGCATGACTAACTTGTCGGGGATGCAAGAGAATGTGGGAAAAATGATCAAGAGGTCACCTAACATAGGATTGCTCTAAGCAAAACTCGCTTAACTTTGAAGTTAATATAATTGAGCCATTGAAAAAAAAAAGTATCACCTTGTTGGTATAAAAGGTAACTATCAATTCTTTTAAGTCTTTATCATACTTTCATATCATCAGACTCTTCTCATTCAAATGTGATGTAGGTTCATTCATGCACCACTCATAAGACGTCACATGCGGTAGTGGTGTTCTTTTAATTTGCTACCTTATAAGTGCTTTTGGATTTAAATTTGCACAGAAAATTTATTAGTACAATATTTTTTTTTCTTTTTCTTTCTTTACTCTTTGTTTGATAAACATCTCATCTCTTTCTTTAAAGAGTCATTAGTTAAAATTAAAAAAAAAAATACATTTTGGTGGATGAGGTTTGGATTTAGTTTCTATTTGGTTCTGAAGTTTCAAAAGAAACACTTTAGTCTCGAGATTTGAAAAATGGTTCTAAATAATCCTTAGACCTATTAATTGACTAACGATGGTTAAGTTGTTGATTGTGTAGTGCTAAGTTGACAAATATATTAATTTATTATTAAACCTAATCTTTATTTAGATTAATGACTAGTTAAGTGTAAGGGATTATAGGGCACTATACCTATCTCGACAATGGTATGATATTGTCCATTTTGGACATAAGCCCTCATGGCTTTGCTTTTAGTTCAACCCAAAAGGCCTCATACCAATGGAGATAGTTGTCCCTCCAATTGGCGACCGGCGAGGTGAAGAGATCGAAATTGCAATTGTAAGCAAAAGACTTGGTGTTGTCTCTTGTATAGTATTCTTTCTTCACTTCCCCGTCTAG

mRNA sequence

ATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGATCAAGCGTTAATTACACTGATCAATGCAACCTTGACGCAAACCGCCCTCTCTTATGTAATCGGTTGTCAAACCTCCAAGGAAGTTTGGGATCGACTTGAGAAGCACTTCTCCTCTTCGACTCAAACGAACATTGTAGGTGTGAAGACAAAGTTGCAAAGTGTTTCAAAGAAATCCGGTGAGTCAATTGATGTTTATGTTCGAAGAATCAAGGAAATTGTGAACAAATTGGTTGCGGTGTCGGTAGTTATTGATGCTGAAGATCTCAATATTTACACTATTAATGGCCTTTCATCTGCTTACAATGTTTTCAAGACCTCTTTATGCACCAGATCTCAAGCCCTAACATTTGTCGAGTTACATATCCTGATGAAGACTGAGGAGACTGCACTTGAACAACAAATAAAAGCTGATGAAATCCCGAATAATTCTCATTTGGCCATGGCGGCTAGTTTTGATTTTGGTGGCAGAGGAAATTGGAGAGGTCGTTTTGATGGAAATCGAAATGGAGGTAGAGGTCGTGGTACTTCTTTTTCCTCTCAGATTACTACTCCTTCATCTCATGGTCAGTTTTCTTCCTCTCCTTCATTTGATGGCAGTCGTCCGCCGAACAAAGTTACCTGTCAAATTTTTCAGAAATACGGCCACAATGCCCTAGACTGTTATAACATAATGAATCACCTTTCGTATACTCCACTCGTTCCCTTCGCCTTCGTAAGCAGACATCCACCAGCTAAGCTTGCAGCAATGGCTACCTTTGCTCCGTCAAACAATTTGGCTCATAATTTTGTTTCTAATGTTGCACCCTCTGACTCACATGTTTGGCTTTCTGACACAGGCTGCAATGCACATTTGACTCATAATCTTGCCAATTTGAGTGTGTCCAATGCATACAATGGGGAAGAGAACATCACTGTTGGTAATGAAATGAGATCTGCCTCCATTTTCCACTGCACCCGAGGTTGGGCATGTCAAAAGGACCCGTATTGGTCTATGGGGACAATCTTTGTTCATAGAAGCAGTTCAAGACTATTCAACCCAAAAGGCCTCATACCAATGGAGATAGTTGTCCCTCCAATTGGCGACCGGCGAGGTGAAGAGATCGAAATTGCAATTGTAAGCAAAAGACTTGGTGTTGTCTCTTGTATAGTATTCTTTCTTCACTTCCCCGTCTAG

Coding sequence (CDS)

ATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGATCAAGCGTTAATTACACTGATCAATGCAACCTTGACGCAAACCGCCCTCTCTTATGTAATCGGTTGTCAAACCTCCAAGGAAGTTTGGGATCGACTTGAGAAGCACTTCTCCTCTTCGACTCAAACGAACATTGTAGGTGTGAAGACAAAGTTGCAAAGTGTTTCAAAGAAATCCGGTGAGTCAATTGATGTTTATGTTCGAAGAATCAAGGAAATTGTGAACAAATTGGTTGCGGTGTCGGTAGTTATTGATGCTGAAGATCTCAATATTTACACTATTAATGGCCTTTCATCTGCTTACAATGTTTTCAAGACCTCTTTATGCACCAGATCTCAAGCCCTAACATTTGTCGAGTTACATATCCTGATGAAGACTGAGGAGACTGCACTTGAACAACAAATAAAAGCTGATGAAATCCCGAATAATTCTCATTTGGCCATGGCGGCTAGTTTTGATTTTGGTGGCAGAGGAAATTGGAGAGGTCGTTTTGATGGAAATCGAAATGGAGGTAGAGGTCGTGGTACTTCTTTTTCCTCTCAGATTACTACTCCTTCATCTCATGGTCAGTTTTCTTCCTCTCCTTCATTTGATGGCAGTCGTCCGCCGAACAAAGTTACCTGTCAAATTTTTCAGAAATACGGCCACAATGCCCTAGACTGTTATAACATAATGAATCACCTTTCGTATACTCCACTCGTTCCCTTCGCCTTCGTAAGCAGACATCCACCAGCTAAGCTTGCAGCAATGGCTACCTTTGCTCCGTCAAACAATTTGGCTCATAATTTTGTTTCTAATGTTGCACCCTCTGACTCACATGTTTGGCTTTCTGACACAGGCTGCAATGCACATTTGACTCATAATCTTGCCAATTTGAGTGTGTCCAATGCATACAATGGGGAAGAGAACATCACTGTTGGTAATGAAATGAGATCTGCCTCCATTTTCCACTGCACCCGAGGTTGGGCATGTCAAAAGGACCCGTATTGGTCTATGGGGACAATCTTTGTTCATAGAAGCAGTTCAAGACTATTCAACCCAAAAGGCCTCATACCAATGGAGATAGTTGTCCCTCCAATTGGCGACCGGCGAGGTGAAGAGATCGAAATTGCAATTGTAAGCAAAAGACTTGGTGTTGTCTCTTGTATAGTATTCTTTCTTCACTTCCCCGTCTAG

Protein sequence

MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKSGESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVELHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFSSQITTPSSHGQFSSSPSFDGSRPPNKVTCQIFQKYGHNALDCYNIMNHLSYTPLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLANLSVSNAYNGEENITVGNEMRSASIFHCTRGWACQKDPYWSMGTIFVHRSSSRLFNPKGLIPMEIVVPPIGDRRGEEIEIAIVSKRLGVVSCIVFFLHFPV

Homology

[Close]

BLAST of Lag0021130 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])

HSP 1 Score: 226.5 bits (576), Expect = 4.4e-55
Identity = 140/315 (44.44%), Postives = 199/315 (63.17%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+TLINATL+  AL+YV+   TSK+VW+ LEKH+SS+++TN+V +K+ LQS+ KK+
Sbjct: 116 KDQALMTLINATLSAEALAYVVRSGTSKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKT 175

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID YV+RIKEI +K   VS+ I+ E L IY +NGLS+ YN   TS+ TR+Q+++F E
Sbjct: 176 EESIDAYVKRIKEIKDKFANVSITINDEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEE 235

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNW---RGRFDGNRNGGRGRGT 215
           LH+ MK+EE+A+E+Q+K +++    +   A+S     R +        D  R    GRG 
Sbjct: 236 LHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGK 295

Query: 216 SFSSQITTPSSHGQFSSSPSFDGSRPPNKVTCQIFQKYGHNALDCYNIMNHLSYTPLVPF 275
           +  +   T    G+ SS   F   +  N+  CQI  K GH ALDCYN MN         F
Sbjct: 296 ANFAPTFTNQGRGR-SSGNFFTSFQADNRSPCQICGKLGHTALDCYNRMN---------F 355

Query: 276 AFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLANLSVSN 335
            F  RHPP +LAAM     ++ LA   V N +P+    WL+D+ CN H+T +L+NLS+++
Sbjct: 356 HFQGRHPPPQLAAMVAVQNNSYLA---VGNSSPT---TWLADSECNTHMTADLSNLSIAS 414

Query: 336 A---YNGEENITVGN 345
               YNGEENI+VG+
Sbjct: 416 IASDYNGEENISVGS 414

[Close]

BLAST of Lag0021130 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 3.3e-50
Identity = 135/317 (42.59%), Postives = 191/317 (60.25%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+T+INATL+  AL+YV+G  +SK+VWD L K +SS +++N+V +K+ LQ++ KK 
Sbjct: 90  KDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKP 149

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID Y++RIKEI +KL  VS  I+ EDL IY +NGL + YN F+TS+ TRSQ +TF E
Sbjct: 150 DESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEE 209

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFS 215
           LH+L++ EE+AL +Q K D+  N   + +++S       +    F+ N   G G G ++ 
Sbjct: 210 LHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQSL---LSCAPTFNNNFVRGNGHGKNY- 269

Query: 216 SQITTPSSHGQFSSSPSFDG------SRP--PNKVTCQIFQKYGHNALDCYNIMNHLSYT 275
                   HG+FS      G       +P   N  TCQI  + GH ALDC+N MN     
Sbjct: 270 -------GHGRFSFDAQTRGHGLSQEQKPVHDNHATCQICSRRGHTALDCFNRMN----- 329

Query: 276 PLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLAN 335
               + F  RHPP +LAAM   A  NN    F+S V  S     L+D+GCN H+T ++  
Sbjct: 330 ----YNFQGRHPPQQLAAMV--ASQNNA---FLSIVNSSS----LTDSGCNTHITSDMNY 377

Query: 336 LSVSNAYNGEENITVGN 345
           +S++  YNGEE + VGN
Sbjct: 390 VSLAPEYNGEEQVGVGN 377

[Close]

BLAST of Lag0021130 vs. NCBI nr
Match: XP_011658579.1 (uncharacterized protein LOC105436058 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 3.3e-50
Identity = 135/317 (42.59%), Postives = 191/317 (60.25%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+T+INATL+  AL+YV+G  +SK+VWD L K +SS +++N+V +K+ LQ++ KK 
Sbjct: 90  KDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKP 149

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID Y++RIKEI +KL  VS  I+ EDL IY +NGL + YN F+TS+ TRSQ +TF E
Sbjct: 150 DESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEE 209

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFS 215
           LH+L++ EE+AL +Q K D+  N   + +++S       +    F+ N   G G G ++ 
Sbjct: 210 LHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQSL---LSCAPTFNNNFVRGNGHGKNY- 269

Query: 216 SQITTPSSHGQFSSSPSFDG------SRP--PNKVTCQIFQKYGHNALDCYNIMNHLSYT 275
                   HG+FS      G       +P   N  TCQI  + GH ALDC+N MN     
Sbjct: 270 -------GHGRFSFDAQTRGHGLSQEQKPVHDNHATCQICSRRGHTALDCFNRMN----- 329

Query: 276 PLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLAN 335
               + F  RHPP +LAAM   A  NN    F+S V  S     L+D+GCN H+T ++  
Sbjct: 330 ----YNFQGRHPPQQLAAMV--ASQNNA---FLSIVNSSS----LTDSGCNTHITSDMNY 377

Query: 336 LSVSNAYNGEENITVGN 345
           +S++  YNGEE + VGN
Sbjct: 390 VSLAPEYNGEEQVGVGN 377

[Close]

BLAST of Lag0021130 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 7.3e-50
Identity = 135/317 (42.59%), Postives = 190/317 (59.94%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+T+INATL+  AL+YV+G  +SK+VWD L K +SS +++N+V +K+ LQ++ KK 
Sbjct: 92  KDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKP 151

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID Y++RIKEI +KL  VS  I+ EDL IY +NGL + YN F+TS+ TRSQ +TF E
Sbjct: 152 DESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEE 211

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFS 215
           LH+L++ EE+AL +Q K D+  N   + +++S       +    FD N   G G G  + 
Sbjct: 212 LHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQSL---LSCAPTFDNNFVRGNGHGKHY- 271

Query: 216 SQITTPSSHGQFS--SSPSFDGSRP------PNKVTCQIFQKYGHNALDCYNIMNHLSYT 275
                   HG+FS  +     GS P       N  TCQI  + GH ALDC+N MN     
Sbjct: 272 -------GHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICSRRGHTALDCFNRMN----- 331

Query: 276 PLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLAN 335
               + F  RHPP +LAAM   A  NN    F+S V  S     L+D+GCN  +T ++  
Sbjct: 332 ----YNFQGRHPPQQLAAMV--ASQNNA---FLSIVNSSS----LTDSGCNTRITSDMNY 379

Query: 336 LSVSNAYNGEENITVGN 345
           +S++  YNGEE + +GN
Sbjct: 392 VSLAPEYNGEEQVGIGN 379

[Close]

BLAST of Lag0021130 vs. NCBI nr
Match: XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo])

HSP 1 Score: 209.1 bits (531), Expect = 7.3e-50
Identity = 135/317 (42.59%), Postives = 190/317 (59.94%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+T+INATL+  AL+YV+G  +SK+VWD L K +SS +++N+V +K+ LQ++ KK 
Sbjct: 92  KDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKP 151

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID Y++RIKEI +KL  VS  I+ EDL IY +NGL + YN F+TS+ TRSQ +TF E
Sbjct: 152 DESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEE 211

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFS 215
           LH+L++ EE+AL +Q K D+  N   + +++S       +    FD N   G G G  + 
Sbjct: 212 LHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQSL---LSCAPTFDNNFVRGNGHGKHY- 271

Query: 216 SQITTPSSHGQFS--SSPSFDGSRP------PNKVTCQIFQKYGHNALDCYNIMNHLSYT 275
                   HG+FS  +     GS P       N  TCQI  + GH ALDC+N MN     
Sbjct: 272 -------GHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICSRRGHTALDCFNRMN----- 331

Query: 276 PLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLAN 335
               + F  RHPP +LAAM   A  NN    F+S V  S     L+D+GCN  +T ++  
Sbjct: 332 ----YNFQGRHPPQQLAAMV--ASQNNA---FLSIVNSSS----LTDSGCNTRITSDMNY 379

Query: 336 LSVSNAYNGEENITVGN 345
           +S++  YNGEE + +GN
Sbjct: 392 VSLAPEYNGEEQVGIGN 379

[Close]

BLAST of Lag0021130 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.1e-55
Identity = 140/315 (44.44%), Postives = 199/315 (63.17%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+TLINATL+  AL+YV+   TSK+VW+ LEKH+SS+++TN+V +K+ LQS+ KK+
Sbjct: 116 KDQALMTLINATLSAEALAYVVRSGTSKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKT 175

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID YV+RIKEI +K   VS+ I+ E L IY +NGLS+ YN   TS+ TR+Q+++F E
Sbjct: 176 EESIDAYVKRIKEIKDKFANVSITINDEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEE 235

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNW---RGRFDGNRNGGRGRGT 215
           LH+ MK+EE+A+E+Q+K +++    +   A+S     R +        D  R    GRG 
Sbjct: 236 LHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGK 295

Query: 216 SFSSQITTPSSHGQFSSSPSFDGSRPPNKVTCQIFQKYGHNALDCYNIMNHLSYTPLVPF 275
           +  +   T    G+ SS   F   +  N+  CQI  K GH ALDCYN MN         F
Sbjct: 296 ANFAPTFTNQGRGR-SSGNFFTSFQADNRSPCQICGKLGHTALDCYNRMN---------F 355

Query: 276 AFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLANLSVSN 335
            F  RHPP +LAAM     ++ LA   V N +P+    WL+D+ CN H+T +L+NLS+++
Sbjct: 356 HFQGRHPPPQLAAMVAVQNNSYLA---VGNSSPT---TWLADSECNTHMTADLSNLSIAS 414

Query: 336 A---YNGEENITVGN 345
               YNGEENI+VG+
Sbjct: 416 IASDYNGEENISVGS 414

[Close]

BLAST of Lag0021130 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.5e-50
Identity = 135/317 (42.59%), Postives = 190/317 (59.94%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+T+INATL+  AL+YV+G  +SK+VWD L K +SS +++N+V +K+ LQ++ KK 
Sbjct: 92  KDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKP 151

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID Y++RIKEI +KL  VS  I+ EDL IY +NGL + YN F+TS+ TRSQ +TF E
Sbjct: 152 DESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEE 211

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFS 215
           LH+L++ EE+AL +Q K D+  N   + +++S       +    FD N   G G G  + 
Sbjct: 212 LHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQSL---LSCAPTFDNNFVRGNGHGKHY- 271

Query: 216 SQITTPSSHGQFS--SSPSFDGSRP------PNKVTCQIFQKYGHNALDCYNIMNHLSYT 275
                   HG+FS  +     GS P       N  TCQI  + GH ALDC+N MN     
Sbjct: 272 -------GHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICSRRGHTALDCFNRMN----- 331

Query: 276 PLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLAN 335
               + F  RHPP +LAAM   A  NN    F+S V  S     L+D+GCN  +T ++  
Sbjct: 332 ----YNFQGRHPPQQLAAMV--ASQNNA---FLSIVNSSS----LTDSGCNTRITSDMNY 379

Query: 336 LSVSNAYNGEENITVGN 345
           +S++  YNGEE + +GN
Sbjct: 392 VSLAPEYNGEEQVGIGN 379

[Close]

BLAST of Lag0021130 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.5e-50
Identity = 135/317 (42.59%), Postives = 190/317 (59.94%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+T+INATL+  AL+YV+G  +SK+VWD L K +SS +++N+V +K+ LQ++ KK 
Sbjct: 92  KDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKP 151

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID Y++RIKEI +KL  VS  I+ EDL IY +NGL + YN F+TS+ TRSQ +TF E
Sbjct: 152 DESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEE 211

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFS 215
           LH+L++ EE+AL +Q K D+  N   + +++S       +    FD N   G G G  + 
Sbjct: 212 LHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQSL---LSCAPTFDNNFVRGNGHGKHY- 271

Query: 216 SQITTPSSHGQFS--SSPSFDGSRP------PNKVTCQIFQKYGHNALDCYNIMNHLSYT 275
                   HG+FS  +     GS P       N  TCQI  + GH ALDC+N MN     
Sbjct: 272 -------GHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICSRRGHTALDCFNRMN----- 331

Query: 276 PLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLAN 335
               + F  RHPP +LAAM   A  NN    F+S V  S     L+D+GCN  +T ++  
Sbjct: 332 ----YNFQGRHPPQQLAAMV--ASQNNA---FLSIVNSSS----LTDSGCNTRITSDMNY 379

Query: 336 LSVSNAYNGEENITVGN 345
           +S++  YNGEE + +GN
Sbjct: 392 VSLAPEYNGEEQVGIGN 379

[Close]

BLAST of Lag0021130 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.5e-50
Identity = 135/317 (42.59%), Postives = 190/317 (59.94%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+T+INATL+  AL+YV+G  +SK+VWD L K +SS +++N+V +K+ LQ++ KK 
Sbjct: 92  KDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKP 151

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID Y++RIKEI +KL  VS  I+ EDL IY +NGL + YN F+TS+ TRSQ +TF E
Sbjct: 152 DESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEE 211

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFS 215
           LH+L++ EE+AL +Q K D+  N   + +++S       +    FD N   G G G  + 
Sbjct: 212 LHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQSL---LSCAPTFDNNFVRGNGHGKHY- 271

Query: 216 SQITTPSSHGQFS--SSPSFDGSRP------PNKVTCQIFQKYGHNALDCYNIMNHLSYT 275
                   HG+FS  +     GS P       N  TCQI  + GH ALDC+N MN     
Sbjct: 272 -------GHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICSRRGHTALDCFNRMN----- 331

Query: 276 PLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLAN 335
               + F  RHPP +LAAM   A  NN    F+S V  S     L+D+GCN  +T ++  
Sbjct: 332 ----YNFQGRHPPQQLAAMV--ASQNNA---FLSIVNSSS----LTDSGCNTRITSDMNY 379

Query: 336 LSVSNAYNGEENITVGN 345
           +S++  YNGEE + +GN
Sbjct: 392 VSLAPEYNGEEQVGIGN 379

[Close]

BLAST of Lag0021130 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.5e-50
Identity = 135/317 (42.59%), Postives = 190/317 (59.94%), Query Frame = 0


Query: 36  RDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTQTNIVGVKTKLQSVSKKS 95
           +DQAL+T+INATL+  AL+YV+G  +SK+VWD L K +SS +++N+V +K+ LQ++ KK 
Sbjct: 92  KDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKP 151

Query: 96  GESIDVYVRRIKEIVNKLVAVSVVIDAEDLNIYTINGLSSAYNVFKTSLCTRSQALTFVE 155
            ESID Y++RIKEI +KL  VS  I+ EDL IY +NGL + YN F+TS+ TRSQ +TF E
Sbjct: 152 DESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEE 211

Query: 156 LHILMKTEETALEQQIKADEIPNNSHLAMAASFDFGGRGNWRGRFDGNRNGGRGRGTSFS 215
           LH+L++ EE+AL +Q K D+  N   + +++S       +    FD N   G G G  + 
Sbjct: 212 LHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQSL---LSCAPTFDNNFVRGNGHGKHY- 271

Query: 216 SQITTPSSHGQFS--SSPSFDGSRP------PNKVTCQIFQKYGHNALDCYNIMNHLSYT 275
                   HG+FS  +     GS P       N  TCQI  + GH ALDC+N MN     
Sbjct: 272 -------GHGRFSFDAQTRGHGSSPEQKSVHDNHATCQICSRRGHTALDCFNRMN----- 331

Query: 276 PLVPFAFVSRHPPAKLAAMATFAPSNNLAHNFVSNVAPSDSHVWLSDTGCNAHLTHNLAN 335
               + F  RHPP +LAAM   A  NN    F+S V  S     L+D+GCN  +T ++  
Sbjct: 332 ----YNFQGRHPPQQLAAMV--ASQNNA---FLSIVNSSS----LTDSGCNTRITSDMNY 379

Query: 336 LSVSNAYNGEENITVGN 345
           +S++  YNGEE + +GN
Sbjct: 392 VSLAPEYNGEEQVGIGN 379

The following BLAST results are available for this feature:

BLAST of Lag0021130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150845.1	4.4e-55	44.44	uncharacterized protein LOC111018892 [Momordica charantia]	[more]
KAE8645659.1	3.3e-50	42.59	hypothetical protein Csa_020439 [Cucumis sativus]	[more]
XP_011658579.1	3.3e-50	42.59	uncharacterized protein LOC105436058 [Cucumis sativus]	[more]
XP_008448007.1	7.3e-50	42.59	PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]	[more]
XP_008448008.1	7.3e-50	42.59	PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]	[more]

BLAST of Lag0021130 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0021130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9L6	2.1e-55	44.44	uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5D3CLI6	3.5e-50	42.59	T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=...	[more]
A0A1S3BI58	3.5e-50	42.59	uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DWT9	3.5e-50	42.59	uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BIR3	3.5e-50	42.59	uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lag0021130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 3..132 e-value: 7.5E-21 score: 74.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..204
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 3..313
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 3..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0021130.1	Lag0021130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding