Lag0021115 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0021115
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionethylene-responsive transcription factor ERF098-like
Locationchr7: 4790919 .. 4791374 (+)
RNA-Seq ExpressionLag0021115
SyntenyLag0021115
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATTCTCGTAAGGGAAAGGAGCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGGCGGCGACCGTGGGGGAAATACGCGGCAGAGATTCGAGACCCGTCGAAGAACGGGGCAAGGCAATGGCTCGGGACCTACGACACGGCGGAGGAGGCGGCTAGGGCTTATGATCGGATGGCATTCCACTTGAAAGGTCATCTTGCTAGTTTGAATTTCCCTAGTGAATATTATGCTCTTGTGATGGGTTCGCCTCCTCATCCTCCTCACTTGTTTCCTTCGGCTCCGATCAACAATCGGGGTTTCGAGAGCGGTGGTAGTGGCGGTGGATCGTCGTCTTCTAACCCCGATCCACGGCAAGTGATTGTATTGGAGTATCTGGATGGGAGAGTTTTGGACGACCTTCTGGAGCAAGAGGAGAAGAAGAAGAAGAAGAATAGCAAATAA

mRNA sequence

ATGGAGGATTCTCGTAAGGGAAAGGAGCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGGCGGCGACCGTGGGGGAAATACGCGGCAGAGATTCGAGACCCGTCGAAGAACGGGGCAAGGCAATGGCTCGGGACCTACGACACGGCGGAGGAGGCGGCTAGGGCTTATGATCGGATGGCATTCCACTTGAAAGGTCATCTTGCTAGTTTGAATTTCCCTAGTGAATATTATGCTCTTGTGATGGGTTCGCCTCCTCATCCTCCTCACTTGTTTCCTTCGGCTCCGATCAACAATCGGGGTTTCGAGAGCGGTGGTAGTGGCGGTGGATCGTCGTCTTCTAACCCCGATCCACGGCAAGTGATTGTATTGGAGTATCTGGATGGGAGAGTTTTGGACGACCTTCTGGAGCAAGAGGAGAAGAAGAAGAAGAAGAATAGCAAATAA

Coding sequence (CDS)

ATGGAGGATTCTCGTAAGGGAAAGGAGCAACAAAAGCAAGGCGACGACGGGATCAAGTACCGGGGAGTGCGGCGGCGACCGTGGGGGAAATACGCGGCAGAGATTCGAGACCCGTCGAAGAACGGGGCAAGGCAATGGCTCGGGACCTACGACACGGCGGAGGAGGCGGCTAGGGCTTATGATCGGATGGCATTCCACTTGAAAGGTCATCTTGCTAGTTTGAATTTCCCTAGTGAATATTATGCTCTTGTGATGGGTTCGCCTCCTCATCCTCCTCACTTGTTTCCTTCGGCTCCGATCAACAATCGGGGTTTCGAGAGCGGTGGTAGTGGCGGTGGATCGTCGTCTTCTAACCCCGATCCACGGCAAGTGATTGTATTGGAGTATCTGGATGGGAGAGTTTTGGACGACCTTCTGGAGCAAGAGGAGAAGAAGAAGAAGAAGAATAGCAAATAA

Protein sequence

MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAYDRMAFHLKGHLASLNFPSEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPDPRQVIVLEYLDGRVLDDLLEQEEKKKKKNSK
Homology
[Close]
BLAST of Lag0021115 vs. NCBI nr
Match: XP_038877370.1 (ethylene-responsive transcription factor ERF098-like [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 1.8e-67
Identity = 140/152 (92.11%), Postives = 142/152 (93.42%), Query Frame = 0 

Query: 1   MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAY 60
           MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTY+TAE+AARAY
Sbjct: 1   MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYETAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPSEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPD 120
           DRMAF LKGHLASLNFP EYYA VMGSPPHPPHLFPSAPI NRGFESG  GGGSSSSN D
Sbjct: 61  DRMAFQLKGHLASLNFPGEYYARVMGSPPHPPHLFPSAPI-NRGFESG--GGGSSSSNFD 120

Query: 121 PRQVIVLEYLDGRVLDDLLEQEE-KKKKKNSK 152
           P QVIVLEYLDGRVLDDLL QEE KKKKKNSK
Sbjct: 121 PEQVIVLEYLDGRVLDDLLGQEEKKKKKKNSK 149

[Close]
BLAST of Lag0021115 vs. NCBI nr
Match: XP_023526049.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67
Identity = 133/150 (88.67%), Postives = 139/150 (92.67%), Query Frame = 0 

Query: 1   MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAY 60
           MEDSRKGK+QQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAE+AARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPSEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPD 120
           DRMAFHLKGHLASLNFP EYYA VMGSPPHPPH FPS+   NRGF++G +  GSSSSNPD
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHFFPSSAPINRGFDTGDA--GSSSSNPD 120

Query: 121 PRQVIVLEYLDGRVLDDLLEQEEKKKKKNS 151
           P QVIVLEYLDGRVLDDLL QEEKKKKKNS
Sbjct: 121 PHQVIVLEYLDGRVLDDLLAQEEKKKKKNS 148

[Close]
BLAST of Lag0021115 vs. NCBI nr
Match: KAG7018789.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67
Identity = 132/150 (88.00%), Postives = 140/150 (93.33%), Query Frame = 0 

Query: 1   MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAY 60
           MEDSRKGK+QQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAE+AARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPSEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPD 120
           DRMAFHLKGHLASLNFP EYYA VMGSPPHPPH+FPS+   NRGF++G +  GSSSSNPD
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDA--GSSSSNPD 120

Query: 121 PRQVIVLEYLDGRVLDDLLEQEEKKKKKNS 151
           P QVIVLEYLDGRVLDDLL QEEKKKKKN+
Sbjct: 121 PHQVIVLEYLDGRVLDDLLAQEEKKKKKNT 148

[Close]
BLAST of Lag0021115 vs. NCBI nr
Match: XP_022980051.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita maxima])

HSP 1 Score: 261.9 bits (668), Expect = 3.3e-66
Identity = 131/150 (87.33%), Postives = 138/150 (92.00%), Query Frame = 0 

Query: 1   MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAY 60
           MEDSRKGK+QQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAE+AARAY
Sbjct: 1   MEDSRKGKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPSEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPD 120
           DRMAFHLKGHLASLNFP EYYA VMGSPPHPPH FPS+   NRGF++G +  GSSSSNPD
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHFFPSSAPINRGFDTGDA--GSSSSNPD 120

Query: 121 PRQVIVLEYLDGRVLDDLLEQEEKKKKKNS 151
           P QVIVLEYLD RVL+DLL QEEKKKKKNS
Sbjct: 121 PHQVIVLEYLDSRVLEDLLAQEEKKKKKNS 148

[Close]
BLAST of Lag0021115 vs. NCBI nr
Match: KAG6582380.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.9 bits (668), Expect = 3.3e-66
Identity = 131/150 (87.33%), Postives = 139/150 (92.67%), Query Frame = 0 

Query: 1   MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAY 60
           MEDSRK K+QQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAE+AARAY
Sbjct: 1   MEDSRKPKDQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEDAARAY 60

Query: 61  DRMAFHLKGHLASLNFPSEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPD 120
           DRMAFHLKGHLASLNFP EYYA VMGSPPHPPH+FPS+   NRGF++G +  GSSSSNPD
Sbjct: 61  DRMAFHLKGHLASLNFPGEYYARVMGSPPHPPHVFPSSAPINRGFDTGDA--GSSSSNPD 120

Query: 121 PRQVIVLEYLDGRVLDDLLEQEEKKKKKNS 151
           P QVIVLEYLDGRVLDDLL QEEKKKKKN+
Sbjct: 121 PHQVIVLEYLDGRVLDDLLAQEEKKKKKNT 148

[Close]
BLAST of Lag0021115 vs. ExPASy Swiss-Prot
Match: Q9LTC5 (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-33
Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 0 

Query: 1   MEDSRKGKEQQKQGDDGIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAY 60
           ME S +    Q Q D   ++RGVRRRPWGK+AAEIRDPS+NGAR WLGT++TAEEAARAY
Sbjct: 1   MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAY 60

Query: 61  DRMAFHLKGHLASLNFPSEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSN-- 120
           DR AF+L+GHLA LNFP+EYY  +      PP+             S  S  GS+S+N  
Sbjct: 61  DRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPY----------ASSSSSSSSGSTSTNVS 120

Query: 121 -PDPRQVIVLEYLDGRVLDDLLEQEEKKK 147
             + R+V   EYLD +VL++LL+ EE+K+
Sbjct: 121 RQNQREVFEFEYLDDKVLEELLDSEERKR 139

[Close]
BLAST of Lag0021115 vs. ExPASy Swiss-Prot
Match: Q9LSX0 (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.8e-26
Identity = 72/144 (50.00%), Postives = 86/144 (59.72%), Query Frame = 0 

Query: 13  QGDDGI-----KYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAYDRMAFHL 72
           QG  G+     KYRGVRRRPWGKYAAEIRD  K+G R WLGT+DTAEEAARAYD+ A+ +
Sbjct: 3   QGGRGVGAEHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSM 62

Query: 73  KGHLASLNFPSEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPDPRQVIVL 132
           +G  A LNFP EY    MGS              +      GS   S+S++   RQV   
Sbjct: 63  RGQAAILNFPHEYN---MGSGV------------SSSTAMAGSSSASASASSSSRQVFEF 122

Query: 133 EYLDGRVLDDLLEQEEKKKKKNSK 152
           EYLD  VL++LLE+ EK  K   K
Sbjct: 123 EYLDDSVLEELLEEGEKPNKGKKK 131

[Close]
BLAST of Lag0021115 vs. ExPASy Swiss-Prot
Match: Q9LTC6 (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25
Identity = 66/132 (50.00%), Postives = 88/132 (66.67%), Query Frame = 0 

Query: 18  IKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAYDRMAFHLKGHLASLNFP 77
           +KYRGVR+RPWGKYAAEIRD +++GAR WLGT++TAE+AARAYDR AF ++G  A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

Query: 78  SEYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPDPRQVIVLEYLDGRVLDD 137
            EY   +M   P+  H    A  ++ G+  GG G        D R+VI  EYLD  +L++
Sbjct: 72  HEYQ--MMKDGPNGSHENAVAS-SSSGYRGGGGG-------DDGREVIEFEYLDDSLLEE 131

Query: 138 LLEQEEKKKKKN 150
           LL+  E+  + N
Sbjct: 132 LLDYGERSNQDN 133

[Close]
BLAST of Lag0021115 vs. ExPASy Swiss-Prot
Match: P93822 (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 67/132 (50.76%), Postives = 79/132 (59.85%), Query Frame = 0 

Query: 19  KYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAYDRMAFHLKGHLASLNFPS 78
           KYRGVRRRPWGKYAAEIRD  K+G R WLGT+DTAE+AARAYDR A+ ++G  A LNFP 
Sbjct: 19  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPH 78

Query: 79  EYYALVMGSPPHPPHLFPSAPINNRGFESGGSGGGSSSSNPDPRQVIVLEYLDGRVLDDL 138
           EY                     N G  S  +   SSSS+   +QV   EYLD  VLD+L
Sbjct: 79  EY---------------------NMGTGSSSTAANSSSSS---QQVFEFEYLDDSVLDEL 126

Query: 139 LEQEEKKKKKNS 151
           LE  E   K ++
Sbjct: 139 LEYGENYNKTHN 126

[Close]
BLAST of Lag0021115 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 9.9e-21
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0 

Query: 17  GIKYRGVRRRPWGKYAAEIRDPSKNGARQWLGTYDTAEEAARAYDRMAFHLKGHLASLNF 76
           G++YRGVRRRPWGK+AAEIRDP KNGAR WLGTY+T E+AA AYDR AF L+G  A LNF
Sbjct: 89  GMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNF 148

Query: 77  P 78
           P
Sbjct: 149 P 149

The following BLAST results are available for this feature:
BLAST of Lag0021115 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038877370.11.8e-6792.11ethylene-responsive transcription factor ERF098-like [Benincasa hispida][more]
XP_023526049.12.3e-6788.67ethylene-responsive transcription factor ERF098-like [Cucurbita pepo subsp. pepo... [more]
KAG7018789.14.0e-6788.00Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022980051.13.3e-6687.33ethylene-responsive transcription factor ERF098-like [Cucurbita maxima][more]
KAG6582380.13.3e-6687.33Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
BLAST of Lag0021115 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LTC51.0e-3352.35Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LSX07.8e-2650.00Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LTC61.0e-2550.00Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 ... [more]
P938221.9e-2450.76Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
Q8L9K19.9e-2175.41Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 20..31
score: 71.67
coord: 43..59
score: 68.13
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 19..83
e-value: 9.8E-34
score: 128.1
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 19..70
e-value: 5.2E-15
score: 55.4
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 19..77
score: 23.498629
IPR001471AP2/ERF domainCDDcd00018AP2coord: 19..77
e-value: 3.651E-30
score: 101.965
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 18..78
e-value: 1.6E-27
score: 97.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR31190:SF303ETHYLENE RESPONSE FACTORcoord: 1..143
IPR044808Ethylene-responsive transcription factorPANTHERPTHR31190DNA-BINDING DOMAINcoord: 1..143
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 19..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0021115.1Lag0021115.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity