Lag0021010 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGAGAAGGTTTTTGTAATGCTGTTGTTGGCAGCGGTTGCGGCGGCGCGTAGCGTTCCTGGTGGCGAGCAGGTGGAGGTCGTGGACGCCGTTGAAGTGAAGGCGGCGGAGTTGCCGGCGGGTGGTGGCGGCGCTTCTGTTCGTGATGAGAAGAATTTTATCTATGGCGGAGTTGGCGGCTTTGCTGGCATGGGCGGGTACTGTTATTTTAAACTAACCCTAAACTCGATTTTTAAATGATGGGAGTTTTTCATTTGTACTTTTAATACATTTGGAGATTAGCGAAAAACTTTTATATTTTTAAGATTCCGTTTAATAGTCATTTGGTTTTTTATTTTTTTAAACCATGCTTATAAACACTATTCATAAGTTTATTATTATTATTATTATTTTGAAAGGAAGTTTGTTAATTTTTTCGTTTTGTTTATTTACAATATTCCATGTTTTCAAAAATTAAGTTGGTTTTAAACTAAAGAATGTAGGCATTCGTTTTGATAACCATTTCGTTTTTTATTTTTTGTTTTTAAAAATTAAACTTATAAGCACTACTTTTATTCACAAGTTTCTTTGTTTTGCAATCTATATCATTCCCTTATTTTCAAAAACCAAGTTAGATTTTGATAAAAAAAAAAATGAGTATTTTTTTAATACTTATTTTTGTTTTCAAATGTGTAATTAACAAAAATTAAAAACCCATTAATAAGGAAATTGGGAGGAAACAAGCCTAGTTTTCAAAAACAAAAAATCAGATGGATATCAAATGGACCTATAGTTTTCAAAATTTTGTTTTTATTTTTAGAATTCAAATGTATACTTAACAAAAATGAAAACAATTATGATAAGTAGTTGGAATATCAAAACAAAAGTAATTTTCAAAACGGTTCCCCCACCCTAATTAAACTAATAAGGTAGGATATTTGATATTTTGAACCTCTAATATGGTTCAAAATACCTGTTTTGATCAGTATATAAACTTTATGCCAATCGAGCCATGCTTTTGTTTGCAATTTGATATTTTAGTTTGATACCATGCATGTTAGAGAGCTAGCGCTACTAAAGATGTTGTAGAAAAAAAAAAGTTTTAAAATAAAACAATTGTAAAAGCAATTTAGGAATTGAATAAAATGATCGAAAATATTAAAGGAAAAAAAAATACTTTTGCTCGTTTAAGAATATTTTTACCACCTTGTAAAAAAAAACATTTACTTACATTTTGAAAACGTTTTTAAAAAGTGTAGCAAAACATACAATAAAATAAAATAAAATAAAAAAATAAAACATGAGAGGACGTAGTATATATAAATTTAATTTTGTTAGGTAAAAACTAAAAATAAAATTATTTTAGCGTTTAATATTCTATTCATACAATAATAACAGGTACGCAGGGCTGGGTATGCCGATGCTGGGTGGTGGCGCTGGGATCGGAAAATTCGGTGGAATTGGTGGGTTCGCCGGAATTGGAAACTTGGGTGGCGCCGGCGGTCTAGGCGGCGGAGGAGCTGGTGGGATCGGCGGTTTGGGAGGCGGAGGACCTATTCTTCCCGGTGGCGGAAATGGAATAGGCGGTCTAGCCGGGCATGGACTTGGCGGAGCTGGTGGAATAGGTGGTCTGGCCGGACATGGACTTGGCGGAGCTGGTGGTGTCGGAGGATCCGGCGGCGGTGCGGTGGGAAACGGCGTAGCCGGCGGCGGTCCTCCGGTCAGTGGCGTTTTTCATCCATAA ATGATGGAGAAGGTTTTTGTAATGCTGTTGTTGGCAGCGGTTGCGGCGGCGCGTAGCGTTCCTGGTGGCGAGCAGGTGGAGGTCGTGGACGCCGTTGAAGTGAAGGCGGCGGAGTTGCCGGCGGGTGGTGGCGGCGCTTCTGTTCGTGATGAGAAGAATTTTATCTATGGCGGAGTTGGCGGCTTTGCTGGCATGGGCGGGTACGCAGGGCTGGGTATGCCGATGCTGGGTGGTGGCGCTGGGATCGGAAAATTCGGTGGAATTGGTGGGTTCGCCGGAATTGGAAACTTGGGTGGCGCCGGCGGTCTAGGCGGCGGAGGAGCTGGTGGGATCGGCGGTTTGGGAGGCGGAGGACCTATTCTTCCCGGTGGCGGAAATGGAATAGGCGGTCTAGCCGGGCATGGACTTGGCGGAGCTGGTGGAATAGGTGGTCTGGCCGGACATGGACTTGGCGGAGCTGGTGGTGTCGGAGGATCCGGCGGCGGTGCGGTGGGAAACGGCGTAGCCGGCGGCGGTCCTCCGGTCAGTGGCGTTTTTCATCCATAA ATGATGGAGAAGGTTTTTGTAATGCTGTTGTTGGCAGCGGTTGCGGCGGCGCGTAGCGTTCCTGGTGGCGAGCAGGTGGAGGTCGTGGACGCCGTTGAAGTGAAGGCGGCGGAGTTGCCGGCGGGTGGTGGCGGCGCTTCTGTTCGTGATGAGAAGAATTTTATCTATGGCGGAGTTGGCGGCTTTGCTGGCATGGGCGGGTACGCAGGGCTGGGTATGCCGATGCTGGGTGGTGGCGCTGGGATCGGAAAATTCGGTGGAATTGGTGGGTTCGCCGGAATTGGAAACTTGGGTGGCGCCGGCGGTCTAGGCGGCGGAGGAGCTGGTGGGATCGGCGGTTTGGGAGGCGGAGGACCTATTCTTCCCGGTGGCGGAAATGGAATAGGCGGTCTAGCCGGGCATGGACTTGGCGGAGCTGGTGGAATAGGTGGTCTGGCCGGACATGGACTTGGCGGAGCTGGTGGTGTCGGAGGATCCGGCGGCGGTGCGGTGGGAAACGGCGTAGCCGGCGGCGGTCCTCCGGTCAGTGGCGTTTTTCATCCATAA MMEKVFVMLLLAAVAAARSVPGGEQVEVVDAVEVKAAELPAGGGGASVRDEKNFIYGGVGGFAGMGGYAGLGMPMLGGGAGIGKFGGIGGFAGIGNLGGAGGLGGGGAGGIGGLGGGGPILPGGGNGIGGLAGHGLGGAGGIGGLAGHGLGGAGGVGGSGGGAVGNGVAGGGPPVSGVFHP Homology
BLAST of Lag0021010 vs. NCBI nr
Match: XP_022974868.1 (glycine-rich cell wall structural protein [Cucurbita maxima]) HSP 1 Score: 183.0 bits (463), Expect = 2.4e-42 Identity = 138/183 (75.41%), Postives = 146/183 (79.78%), Query Frame = 0
BLAST of Lag0021010 vs. NCBI nr
Match: XP_011652752.1 (glycine-rich protein 23 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 2.6e-41 Identity = 139/192 (72.40%), Postives = 148/192 (77.08%), Query Frame = 0
BLAST of Lag0021010 vs. NCBI nr
Match: KAG6597313.1 (hypothetical protein SDJN03_10493, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 173.7 bits (439), Expect = 1.4e-39 Identity = 133/173 (76.88%), Postives = 142/173 (82.08%), Query Frame = 0
BLAST of Lag0021010 vs. NCBI nr
Match: KAA0049179.1 (putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa] >TYK17381.1 putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 3.2e-39 Identity = 132/191 (69.11%), Postives = 142/191 (74.35%), Query Frame = 0
BLAST of Lag0021010 vs. NCBI nr
Match: XP_023540607.1 (glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.2 bits (435), Expect = 4.2e-39 Identity = 139/207 (67.15%), Postives = 145/207 (70.05%), Query Frame = 0
BLAST of Lag0021010 vs. ExPASy Swiss-Prot
Match: O48848 (Glycine-rich protein 23 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05 Identity = 71/123 (57.72%), Postives = 79/123 (64.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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