Lag0020924 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGGCGTCGTCTACGTTCGTCACAGTGCCAAAGCCCTTTATCGACAGGTCCAATTCACCTTCTGTGTCTGCCCGGCGGCAGATAATCGGTACGCTGAGAACTCCGTTGGTTGATTGATTGTTGCATTTTCTTTTTCTCGATCAATTTTTGTCTCATTCCGTATTCTGAATTTCTGGTTGATTTTGCTTCTTGAGTTTTGGATAGGCGGATTGCGAAGAAACTCTTTGAAAGTCAGCGCAGTTTCTAAGAAATGGGAGCCTGCGAAGGTTTGCCTCTCCTTTTCTCCCGAAATCTCCTCACCGATTTTAGATTCTTTTTTCTTTCTAATGTGTTATTGAACTTGTGTTACTGATTTCAATGCTTATTTTTGGCGTTTTATGATTCTTGTGGATTTCAGGTGGTTCCTCAAGCTGATAGAGTTCTCGTTCGTCTTGAGCAGCTTCCTGAGGTAAGCTCATTAGAATTCTTCTGTAACTCGTAGAACTTGTTGGTTGTATTGAAAACTGTAAAATGTTCCAAAATTTTGAGATGCTTTATCGTGGCAGAAATCAGCTGGTGGAGTTTTGCTTCCCAAATCAGCTGTCAAATTTGAGCGGTATCTCGTGGGAGAGGTGGGGAAATTCCTTCTATTACTGTTGCTAATGTCTCTGTATTTATTCCTGTGAGGGAATGTGTTTGATAATAGGTATTATTTAATATGTTTCTATCAGATTCTATCCATTGGAACAGAAGTTGGAGGGAGTGATATTGCACCTGGAAAGAAGGTAATCAAGGAGTTTTCTTTAATGAACTTTCAAGCTGTAAGTGTGTTTTATAGATTTGGTTTTTCTTAAGTAATGGTGAGTTTGTTGTGTTTTTATTTAGCACTTTCGGTAAGTACTTTTAAATGGTTTTTGTAGTACTTTTTAAATTTTCAATAACTCTTTTAGCTACGTAACTAAACACTGAGAAATTTGAAATGTGCTTTTCAATTATCTAAGAACATTATTTTTGTTCCAAAACGTGCCAAATCCACCCTTATTTTTATGCAAACTTTTGGGACTTGTTTTTTTCTAAGAGGAGCAAATTTCTATTACCTTGCAGGTTCTTTTATCCGACATAAATGCTTATGAGGTAAGTCGTTTATTCTGGTGGCCTTATCATATTGGCTTGATATTTTCTCAATTATTTATGGTCCAATTTTCCTTCTCAAGCATTGGTTACCACAAGTGTGCTGCCATTTTGGTTACCACAAGCATTATTTATGGTCCAATTTTGCTACTAGGGTGTTTGAACACATGGGGTGGGGTAGAGTGATTCGAACTTCTAATCTTTAGGTCAAAGGTTCGAATTCCTCCACCTCTATGTTGTTGAACTTTAAAAAAATCTGAACATAGGGTTGGTTGATTATAAGTTTGTTTGACTTGGGTTAGTCTAGCTATGAGTCCTCTGAGAATTGGTTTGGGTTGAATCAAATTAACTTAAGCTTATCAATTAAAAATCTCTTTTTACTTACGATAATATTATACGTGCATATATTATTTTATTTGATCATTTTCTTTAGTTCTTTTACCGAACAACTTTTAGAAAATAGTTCTTTAAGTCTTTGGGTATAGTTTCTCGTGAAATTAAATTTGTCATCAAATAACTAATTTTTCATTCAACATTTAAATAACTTGTTAGACACTTATCTGGCCGACAGCTTTTCTTTCTCTCTCTGCAAAATTTTGAACAATTGCCCCAAACAACTACATTTTTACGACTTTGAATGTCCTAACATTATGGTCATAGTTTCTAGTGCTTAGCAAAGCCTATAAAACCTAGTTGTTTCTGGATATTGATTATTTCACCGAATACCGCGATTCTTATTGTAAACGTACACTGATTGATGTAAAACTGCCACTAGTGGCTCAGGACTCTAGCTGCAGGGCCCAAATATCAGATATATTTCTAGGAAAAATGTTTGTTAAGATTACTACTTTTAATAATGCATCCTCGGAACTTTTATCTACTAACTTGTATCATGTATGTTAGCTGACCTTCTCACTCTTGTTTGTCATGAAATAGTAATTCGAGTTTGTTTTTCTCATTTCCCTTAAACTATTTTTGCTTCTATTTTTCTCCATTTCGGATTCCAAAATGAAAGAAATGAGTTCGATGGGGTTTCTAATATATTAAATCATGGGAAATTATAGTAGCCCCTTGATCCTACACGTTCTTCTTTTGTAATTACAGTCTTACCATATGATTATTAACAACTGAAATACCTTCCTTAGTCAAGCTTTGGGAAGGAGGTTTCTCTATCCCTTGCTCTTAGGTTGCTCTTTTGTCTTTGCATGAATATATTTTATCGTTTCTTATCAATATATGTATCCTACAAGTTCTTCAATGTCAAAAGTTGTTAGGTTAGGTAGTTATCATCGTGTGTGTTTAGTCGAGACGCACGGACTGATCTGAATACAATTAGAGCGATAACTTTCTACATCTAAATAAGCCAAATGACAATGTAGTTTTTCTTTTTAATGTTCCAAGTCTTGAATAGCACAGTGATCAGGCTTCATCCATGCATGTTGGAAACATCTCGCTGTATTATTTGTTGTTAAGCATGTGACAAACAAATCTACATCTAAACACAGCCTATATTTTGTATTTTGATTATTAATATATATATGCATGTATGTACATGTATATTATATGTTTTAATTTTAATATATTCATTGTGAATGTTGGTGGTGGTTTCTCAGGTGGATTTAGGTACAGATGCTAAGCACTGCTTCTGTAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAG ATGGCGATGGCGTCGTCTACGTTCGTCACAGTGCCAAAGCCCTTTATCGACAGGTCCAATTCACCTTCTGTGTCTGCCCGGCGGCAGATAATCGGCGGATTGCGAAGAAACTCTTTGAAAGTCAGCGCAGTTTCTAAGAAATGGGAGCCTGCGAAGGTGGTTCCTCAAGCTGATAGAGTTCTCGTTCGTCTTGAGCAGCTTCCTGAGAAATCAGCTGGTGGAGTTTTGCTTCCCAAATCAGCTGTCAAATTTGAGCGGTATCTCGTGGGAGAGATTCTATCCATTGGAACAGAAGTTGGAGGGAGTGATATTGCACCTGGAAAGAAGGTTCTTTTATCCGACATAAATGCTTATGAGGTGGATTTAGGTACAGATGCTAAGCACTGCTTCTGTAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAG ATGGCGATGGCGTCGTCTACGTTCGTCACAGTGCCAAAGCCCTTTATCGACAGGTCCAATTCACCTTCTGTGTCTGCCCGGCGGCAGATAATCGGCGGATTGCGAAGAAACTCTTTGAAAGTCAGCGCAGTTTCTAAGAAATGGGAGCCTGCGAAGGTGGTTCCTCAAGCTGATAGAGTTCTCGTTCGTCTTGAGCAGCTTCCTGAGAAATCAGCTGGTGGAGTTTTGCTTCCCAAATCAGCTGTCAAATTTGAGCGGTATCTCGTGGGAGAGATTCTATCCATTGGAACAGAAGTTGGAGGGAGTGATATTGCACCTGGAAAGAAGGTTCTTTTATCCGACATAAATGCTTATGAGGTGGATTTAGGTACAGATGCTAAGCACTGCTTCTGTAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAG MAMASSTFVTVPKPFIDRSNSPSVSARRQIIGGLRRNSLKVSAVSKKWEPAKVVPQADRVLVRLEQLPEKSAGGVLLPKSAVKFERYLVGEILSIGTEVGGSDIAPGKKVLLSDINAYEVDLGTDAKHCFCKAGDLLAVVE Homology
BLAST of Lag0020924 vs. NCBI nr
Match: XP_008438275.1 (PREDICTED: 10 kDa chaperonin isoform X1 [Cucumis melo] >KAA0049110.1 10 kDa chaperonin isoform X1 [Cucumis melo var. makuwa] >TYK17453.1 10 kDa chaperonin isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 242.3 bits (617), Expect = 2.6e-60 Identity = 126/142 (88.73%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of Lag0020924 vs. NCBI nr
Match: XP_038880425.1 (10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59 Identity = 125/141 (88.65%), Postives = 134/141 (95.04%), Query Frame = 0
BLAST of Lag0020924 vs. NCBI nr
Match: XP_022936135.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata] >KAG6597250.1 10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59 Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Lag0020924 vs. NCBI nr
Match: XP_022974766.1 (10 kDa chaperonin 1, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022974767.1 10 kDa chaperonin 1, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 238.8 bits (608), Expect = 2.8e-59 Identity = 123/141 (87.23%), Postives = 132/141 (93.62%), Query Frame = 0
BLAST of Lag0020924 vs. NCBI nr
Match: XP_023539001.1 (10 kDa chaperonin 1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.8 bits (608), Expect = 2.8e-59 Identity = 122/141 (86.52%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Lag0020924 vs. ExPASy Swiss-Prot
Match: Q9M1C2 (10 kDa chaperonin 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-1 PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.3e-46 Identity = 94/141 (66.67%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of Lag0020924 vs. ExPASy Swiss-Prot
Match: O80504 (10 kDa chaperonin 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN10-2 PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 5.6e-42 Identity = 88/142 (61.97%), Postives = 111/142 (78.17%), Query Frame = 0
BLAST of Lag0020924 vs. ExPASy Swiss-Prot
Match: Q0I7U2 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9311) OX=64471 GN=groS PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06 Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of Lag0020924 vs. ExPASy Swiss-Prot
Match: Q2JL42 (10 kDa chaperonin OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=groS PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 0
BLAST of Lag0020924 vs. ExPASy Swiss-Prot
Match: A5GNB0 (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) OX=32051 GN=groS PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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