Lag0020891 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0020891
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr7: 2892372 .. 2894373 (-)
RNA-Seq Expression	Lag0020891
Synteny	Lag0020891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATAACAGTACCTGGAAGGATTGCTGCAGAGGAAGTGACTCGTGAGTCGCTTATTGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAGCAGCGAAAACCTCAATCTGGCCAACGGGATAGACCACAATCAGGTGGTAGGGAAAGAATACGATGGAGAGGAGAAATATAGATCTGAGCTGATCTCTATTTCCTTCCTTGAGTCACCACCTGAAGTTGGAAGTGTACCTGTGGGCGAACTCAAGGGTTAGTGCCTCGACGTCTGTTATCATAATTGTATACGTTCTTATGTAAAAATGATGCTAATCCAAGTTTATGGACACGTTGTTGCGACTGTCGTAGAGCAATGCTGTCCATATTCTTTGCTTATGTAACATAAACCCTTGCACGGGTTGTCTGTACTCTATTGTGGAAACTTATTGCTGTGTGAGCCCCATGAATGAACTTGTGAACCCTTGGTACTCTGCTTTCTTCTTTTACATTTTTGTCACCTTTAATGTAATATCAATACCATAGTGCCTTAAATATTGTATATAGGTTATACACTGTATGTTATAATAGTTTTGAACTGATTATTTGTTTCAAGTAGTTTATAGCTGAGACTTTTAAGTTAGCTTTTGGAAGAGAGTTGTTTGACATATATGGTAACCATGCAGTCAGTTAGTTTAGGTTCATAATTCTTTTTGGCATACATGTCTGATTTCATGGTTACCATATATGTAGAATTCTGGGTAATGGTAATCATATTTCTTTTTGGCATGATATCTGGGCTACTAATATAGATCTTGCCACAAGATTTTCACAGATTTATAGGTTTTCTAATAATGCTCATGCAACGGTGGCTGATTTATGGAATTCAAAAAATAATGATTGGGATTTGGGTCTCAGAAGATGTCTTAAAGACTCGGAGATAGAGGATTGGGCATCTCTTGCCCATATCTTACAATCTCTTGTTCAAAACTGGACGAATGATTCATGGCAATTGTCTTTAGATCCATCTAAAAGCTACTCAGTACGATCTATGATGCATTTTTTTGGTGAAGCCACAAGACCATGATAACCAACCTTTATTTACAGCCATATGGAAAGATTTCTATCCTAGAAAAATAAAAAATTTTCTTTGGGAGCTTAGTCATGGTGGTATTAATACGGCGGAGCGTCTCCAAAGAAGAATGTCATATAATGCTATCTCTCCCTCTTGGTGTATTATGTGTAAAGCCAATGTGGAATCTCAATGTCGTTTATTTAGCTCGTGTTTTTGCTCAGAAGTATTGGAACTTTATCTTGAATAAGTTTGGCTGGAATATGATTATGTCTGGATCTATGCAAGTTATACTATCTGTGGTTTTTTCGGGTCATCCTTTCAAAGGAAATGTGGAAACTATGTGGGCTAGCCTTTAATTGTTCCTTCTTTTGGTCTTTATGGTGTGAAAGAAATGGAAGGATTTTCAACGATACACAATCAATCTTTGAAGACTTTCTGGATTTAGCTATTTTAATGCTCTTTATTGGTGTAAATGTTCACATCCTTTTAAAGATTATAGTCTTGATTTTTTTACTCTTAATTGGAGGTCCTTTTTGTAAGTTTTCTCATAATGGTTTCAGGGTTTTATCCCTCATTTCATTTATCAATGAAATAATTTTGTTTCTCTCTAAAAAAAAATAGTCATGTACTTGTTAGATTGCTCATTGTTACTGAGGGGTTTGTTTCTCTTATCTTAAAGTGTGGAAATGTTGATTCGGAAGTGTTCCTAACTAGAGTTTGTAAATCCAGATTTCAAAATTTAGCAAATGGTTGCAGAAAAATTATGGAAGCCTGAAAGAATTGAAGAATGATCTTTAATGAAGCAGGGGAAAAATGGGGCAATGGAATTGACTTGTGGATCGATGGGAATGATTGAAGCTATTACAATCTCAAAGGTCGATGGTTCGATCTGCAAACTCCCCAAAGGTCAGATTCGCAACAAATAG

mRNA sequence

ATGGATATAACAGTACCTGGAAGGATTGCTGCAGAGGAAGTGACTCGTGAGTCGCTTATTGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAGCAGCGAAAACCTCAATCTGGCCAACGGGATAGACCACAATCAGGTGGTAGGGAAAGAATACGATGGAGAGGAGAAATATAGATCTGAGCTGATCTCTATTTCCTTCCTTGAGTCACCACCTGAAGTTGGAAGTGTACCTGTGGGCGAACTCAAGGATCTTGCCACAAGATTTTCACAGATTTATAGGTTTTCTAATAATGCTCATGCAACGGTGGCTGATTTATGGAATTCAAAAAATAATGATTGGGATTTGGGTCTCAGAAGATGTCTTAAAGACTCGGAGATAGAGGATTGGGCATCTCTTGCCCATATCTTACAATCTCTTGTTCAAAACTGGACGAATGATTCATGGCAATTGTCTTTAGATCCATCTAAAAGCTACTCAGGGAAAAATGGGGCAATGGAATTGACTTGTGGATCGATGGGAATGATTGAAGCTATTACAATCTCAAAGGTCGATGGTTCGATCTGCAAACTCCCCAAAGGTCAGATTCGCAACAAATAG

Coding sequence (CDS)

ATGGATATAACAGTACCTGGAAGGATTGCTGCAGAGGAAGTGACTCGTGAGTCGCTTATTGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAGCAGCGAAAACCTCAATCTGGCCAACGGGATAGACCACAATCAGGTGGTAGGGAAAGAATACGATGGAGAGGAGAAATATAGATCTGAGCTGATCTCTATTTCCTTCCTTGAGTCACCACCTGAAGTTGGAAGTGTACCTGTGGGCGAACTCAAGGATCTTGCCACAAGATTTTCACAGATTTATAGGTTTTCTAATAATGCTCATGCAACGGTGGCTGATTTATGGAATTCAAAAAATAATGATTGGGATTTGGGTCTCAGAAGATGTCTTAAAGACTCGGAGATAGAGGATTGGGCATCTCTTGCCCATATCTTACAATCTCTTGTTCAAAACTGGACGAATGATTCATGGCAATTGTCTTTAGATCCATCTAAAAGCTACTCAGGGAAAAATGGGGCAATGGAATTGACTTGTGGATCGATGGGAATGATTGAAGCTATTACAATCTCAAAGGTCGATGGTTCGATCTGCAAACTCCCCAAAGGTCAGATTCGCAACAAATAG

Protein sequence

MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKEYDGEEKYRSELISISFLESPPEVGSVPVGELKDLATRFSQIYRFSNNAHATVADLWNSKNNDWDLGLRRCLKDSEIEDWASLAHILQSLVQNWTNDSWQLSLDPSKSYSGKNGAMELTCGSMGMIEAITISKVDGSICKLPKGQIRNK

Homology

[Close]

BLAST of Lag0020891 vs. NCBI nr
Match: KAA0049081.1 (hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa] >TYK17482.1 hypothetical protein E5676_scaffold434G003470 [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 6.9e-30
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1  MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
          MDITVPGR A EEVTRESLI+ISYEEPET LSSKR S KLSSEN+NLANGI+HNQV GKE
Sbjct: 1  MDITVPGRNAPEEVTRESLISISYEEPETILSSKRPSEKLSSENINLANGINHNQVEGKE 60

Query: 61 YDGEEKYRSELISISFLESPPEVGSVPV 89
          YDG+EK+RSELI+ISFLES PE GSVPV
Sbjct: 61 YDGDEKFRSELIAISFLESLPETGSVPV 88

[Close]

BLAST of Lag0020891 vs. NCBI nr
Match: KAG6582528.1 (hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-29
Identity = 77/92 (83.70%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1  MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
          MDITVPG    EEVTRESLIAISYEEPET LSSKRSSGKLSSENLNL NGIDHN V GKE
Sbjct: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60

Query: 61 YDGEEKYRSELISISFLESPPEVGSVPVGELK 93
          YD  EKYRSELI+ISFLESPPE+GS  V ELK
Sbjct: 61 YD-VEKYRSELIAISFLESPPEIGSGTVTELK 91

[Close]

BLAST of Lag0020891 vs. NCBI nr
Match: KAG7018913.1 (hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-29
Identity = 77/92 (83.70%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1  MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
          MDITVPG    EEVTRESLIAISYEEPET LSSKRSSGKLSSENLNL NGIDHN V GKE
Sbjct: 1  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKE 60

Query: 61 YDGEEKYRSELISISFLESPPEVGSVPVGELK 93
          YD  EKYRSELI+ISFLESPPE+GS  V ELK
Sbjct: 61 YD-VEKYRSELIAISFLESPPEIGSGTVTELK 91

[Close]

BLAST of Lag0020891 vs. NCBI nr
Match: KGN56651.1 (hypothetical protein Csa_009703 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-29
Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
          MD TVPGR A EEVTRESLI+ISYEEPET LSS + S K+S EN+NLANGI+HNQ+ GKE
Sbjct: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60

Query: 61 YDGEEKYRSELISISFLESPPEVGSVPVGELK 93
          YDG+EK+RSELI+ISFLES PE GSVPV ELK
Sbjct: 61 YDGDEKFRSELIAISFLESLPETGSVPVAELK 92

[Close]

BLAST of Lag0020891 vs. NCBI nr
Match: KAG6597232.1 (DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.0 bits (323), Expect = 4.7e-26
Identity = 69/92 (75.00%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1  MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
          MDITVPG+  +EEVTRESLIAISY EPE+ALSSKR SGKL+S+NLNL        V GKE
Sbjct: 1  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKE 60

Query: 61 YDGEEKYRSELISISFLESPPEVGSVPVGELK 93
          +D +EKYRSELISISFLESPPE+GSVPVG+LK
Sbjct: 61 FDADEKYRSELISISFLESPPEIGSVPVGKLK 84

[Close]

BLAST of Lag0020891 vs. ExPASy TrEMBL
Match: A0A5A7U641 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003470 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.4e-30
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 1  MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
          MDITVPGR A EEVTRESLI+ISYEEPET LSSKR S KLSSEN+NLANGI+HNQV GKE
Sbjct: 1  MDITVPGRNAPEEVTRESLISISYEEPETILSSKRPSEKLSSENINLANGINHNQVEGKE 60

Query: 61 YDGEEKYRSELISISFLESPPEVGSVPV 89
          YDG+EK+RSELI+ISFLES PE GSVPV
Sbjct: 61 YDGDEKFRSELIAISFLESLPETGSVPV 88

[Close]

BLAST of Lag0020891 vs. ExPASy TrEMBL
Match: A0A0A0L967 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.8e-29
Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
          MD TVPGR A EEVTRESLI+ISYEEPET LSS + S K+S EN+NLANGI+HNQ+ GKE
Sbjct: 1  MDTTVPGRNAPEEVTRESLISISYEEPETVLSSNQPSEKISRENINLANGINHNQMEGKE 60

Query: 61 YDGEEKYRSELISISFLESPPEVGSVPVGELK 93
          YDG+EK+RSELI+ISFLES PE GSVPV ELK
Sbjct: 61 YDGDEKFRSELIAISFLESLPETGSVPVAELK 92

[Close]

BLAST of Lag0020891 vs. ExPASy TrEMBL
Match: A0A6J1HHB9 (uncharacterized protein LOC111463263 OS=Cucurbita moschata OX=3662 GN=LOC111463263 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-26
Identity = 69/92 (75.00%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1   MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
           MDITVPG+  +EEVTRESLIAISY EPE+ALSSKR SGKL+S+NLNL        V GKE
Sbjct: 25  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKE 84

Query: 61  YDGEEKYRSELISISFLESPPEVGSVPVGELK 93
           +D +EKYRSELISISFLESPPE+GSVPVG+LK
Sbjct: 85  FDADEKYRSELISISFLESPPEIGSVPVGKLK 108

[Close]

BLAST of Lag0020891 vs. ExPASy TrEMBL
Match: A0A6J1IHW2 (uncharacterized protein LOC111473815 OS=Cucurbita maxima OX=3661 GN=LOC111473815 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.0e-26
Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1   MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
           MDITVPG+  +EEVTRESLIAISY EPE+ALSSKR SGKL+S+NLNL        V GKE
Sbjct: 25  MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNL--------VEGKE 84

Query: 61  YDGEEKYRSELISISFLESPPEVGSVPVGELK 93
           +D +EKYRSELI+ISFLESPPE+GSVPVG+LK
Sbjct: 85  FDADEKYRSELIAISFLESPPEIGSVPVGKLK 108

[Close]

BLAST of Lag0020891 vs. ExPASy TrEMBL
Match: W9RTT6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023870 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12
Identity = 53/96 (55.21%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 1  MDITVPGRIAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENLNLANGIDHNQVVGKE 60
          MD T P +   EEVTRESLI+ISY  PE  L+SK SS KL+ ENL          V G +
Sbjct: 1  MDKTAPEKEVPEEVTRESLISISYSLPENVLTSKPSSDKLNGENL----------VGGID 60

Query: 61 YDGEEKYRSELISISFLESPPEVGSVPV---GELKD 94
           DGE+K+RSELISIS+ +S P+VG +PV   GELKD
Sbjct: 61 CDGEDKFRSELISISYTQS-PDVGGLPVALGGELKD 85

The following BLAST results are available for this feature:

BLAST of Lag0020891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049081.1	6.9e-30	84.09	hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa] >TYK174...	[more]
KAG6582528.1	4.5e-29	83.70	hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7018913.1	4.5e-29	83.70	hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN56651.1	5.9e-29	77.17	hypothetical protein Csa_009703 [Cucumis sativus]	[more]
KAG6597232.1	4.7e-26	75.00	DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lag0020891 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0020891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U641	3.4e-30	84.09	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L967	2.8e-29	77.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1	[more]
A0A6J1HHB9	2.3e-26	75.00	uncharacterized protein LOC111463263 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A6J1IHW2	5.0e-26	73.91	uncharacterized protein LOC111473815 OS=Cucurbita maxima OX=3661 GN=LOC111473815...	[more]
W9RTT6	1.4e-12	55.21	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023870 PE=4 SV=1	[more]

BLAST of Lag0020891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35282:SF2	F5D14.24 PROTEIN	coord: 1..88
None	No IPR available	PANTHER	PTHR35282	F5D14.24 PROTEIN	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0020891.1	Lag0020891.1	mRNA