Lag0020616 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0020616
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	GRF1-interacting factor 3-like
Location	chr7: 817860 .. 820304 (+)
RNA-Seq Expression	Lag0020616
Synteny	Lag0020616

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCGTTTCCCCCCACCAATATCACCACCGAGCAGATTCAAAAGGCAAGCTCTTTCTCTTTCTTCTTTACTTTTTACTCAAAACGCCTGTTTTTGCGCATATGGTAGTGTAGTAATGACTGCTCCTTGATTTGATGGAGCTTTGTTTATGGCACTGGATGTGGTTTTGAAAGGAAAATGCTTTTGTTCTTGATGAGTCGTTAGCTTTTACATGAATGGCTCCTTTAATGACTGGATGTTTGCAGATGGAAAGAAGCAAGTAAAGTAGGCCCCTTGATGGGAGTATTATTTAAGTAGTAGTTGGAGACCATTATGTAATTATTTTAAACCCTTTTTCACATACTACCTGAATCACTAGGTTTGTCCCTGCGATAGCTAGTTTTACCAGTCATTAGAGGAACATAGGGAGGAAGAATATGTTGGTTCACTCATTATTCTTTTTTATAAGTTTGTTAGTTAGGGCAAGATGCTATTATTCTTGCCTACTTGAAATGTGCTATGATGAATTTTATCTTTAATTAACAATTGAAAATCACATGGTAATATTCTATTGGAAACATGGTTCCGGGGATTAAGTCTAGTCATAGTGCTGGACTGCTAGTTACATATTTGATATTGGAGTTGGGAGATGCAGTTGTTGATTAAATTTTTGGAGATCTCTCCTTTTCCTTTAATTGTGGATTGGGGAGCCTTTCTTTTCATTTGCTTCCTCTCGTTTAGAATGTTTGAACTGGTTTTTCTTTCTTTTCAACTTGGGATATTTAAAGTCAAGGTGTTTATCAAAACAATCTAAGTGCAGGTTTGGAATGACTTTGTAGGTGCTTAAAAGGGGGGTTTGAATTGTTAAAAAAGTATTTTTAGGCACTTGAAAAGTCATTTCAAACAGGCCCTAATATGGATTTATTTAAGTTCTTCGTATCAGATCCTTGTTAAGATGCTTGAGTTAAAGTTGTCAACAATGCATACTTTCTACTGAATGCAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTAAGTTACCCCTCTCTCTGGACATTGTTGTGTTTGGTGTTGGTTCTTTAAATGTTGCGTCCCACAATTCCCCTGGGGAACGTATCCTTTTTGTGGGTGGGGGTGAGGAGCCTCTACCTTTGTTTATGGGGTTCATGAGGTTGTTGCATTGATTTTATCTAATTGCATCTTATCAAAACAAAAAAAAAAAAAAAACAAAAAAAAAAAACAAAAAATTCTAATTGCCCAGTTCTAAAAAGTATAGTTCAAAGAGGTTCGTGTCATGTTCTTAAGCAATTGATTTACCATGCATGTTATGAAAGTAAGGATCGTGTATCTTGGACTTCATGGACTGGAAGCAACTATAGATGCAAGTTTTCTTTTTATATGTCATTATAAATCTTGCTTCTAATGCTCCATATCATTGTCAGGGATCTAGATCAAGTATGCATTTCTCATCTAAATTCTAAATTAAGATCCAGTAGGTACTTCAGAATTGATACTAGGTAGTATTAGTATATTTGTGAATGTTAGGAGTCAGATACATTACAGTTTTTTTTTTTTCATTTTTGATAAGTTTACATCATCTGCATCCTTTGTTGTGCATTAATGTGCCTGTATGTTTTATATGGACTGCTGAAGTGTCGTATTTTCTAAAACTATTTGTCTTACGTGGCTCTCAATTTTCCCAATAGAATGTATTTTACTTGAGTTCAACATCCCCATGTACCTGTGGTGTGCAACTGTGCATTAGCTTGTACTTGAGTTAATAGTTAATACAATACTTGTGATTAGGTACCAAGCCCAACTTCAGAAGAATTTAATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCAGCTATGCCTCCACAGGTTGGTAATTAATTAGGCCTCAGCTTCTGCTAATTTGATGATGTATTATACGTCTGTCTTACCTGTGTTACAATGGTCAGATGGCCCCACATCCTGCCATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAAGCAGCTATAATGGCACAGCAATCGGGACTTTTCCCTCCGAAAGTCCCATTGCAGTTCGGCAACCCCCATCAATTACAGGATCCACAGCAGCAGCTACACCAGCAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGAGGGGCCAACAATGGCATGCATCACCCACATCATACTGAGGGTGCCCTTGGGGGTGCTGGTGCTGGAGGGCCTGCTCGAAGTTCAGGGCAAACCGATGCCCGTGGAGGTGGTAAGCAGGACTCTGCTGATGTGGGAGGTGCAGGTGCTGATGGTCAGGGGAGCTCAGCTGCTGGTCGGGGTGGTGGTGGTGATGGAGAGGAAGCTAAGTAG

mRNA sequence

ATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCGTTTCCCCCCACCAATATCACCACCGAGCAGATTCAAAAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTACCAAGCCCAACTTCAGAAGAATTTAATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCAGCTATGCCTCCACAGATGGCCCCACATCCTGCCATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAAGCAGCTATAATGGCACAGCAATCGGGACTTTTCCCTCCGAAAGTCCCATTGCAGTTCGGCAACCCCCATCAATTACAGGATCCACAGCAGCAGCTACACCAGCAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGAGGGGCCAACAATGGCATGCATCACCCACATCATACTGAGGGTGCCCTTGGGGGTGCTGGTGCTGGAGGGCCTGCTCGAAGTTCAGGGCAAACCGATGCCCGTGGAGGTGGTAAGCAGGACTCTGCTGATGTGGGAGGTGCAGGTGCTGATGGTCAGGGGAGCTCAGCTGCTGGTCGGGGTGGTGGTGGTGATGGAGAGGAAGCTAAGTAG

Coding sequence (CDS)

ATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCGTTTCCCCCCACCAATATCACCACCGAGCAGATTCAAAAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTACCAAGCCCAACTTCAGAAGAATTTAATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCAGCTATGCCTCCACAGATGGCCCCACATCCTGCCATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAAGCAGCTATAATGGCACAGCAATCGGGACTTTTCCCTCCGAAAGTCCCATTGCAGTTCGGCAACCCCCATCAATTACAGGATCCACAGCAGCAGCTACACCAGCAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGAGGGGCCAACAATGGCATGCATCACCCACATCATACTGAGGGTGCCCTTGGGGGTGCTGGTGCTGGAGGGCCTGCTCGAAGTTCAGGGCAAACCGATGCCCGTGGAGGTGGTAAGCAGGACTCTGCTGATGTGGGAGGTGCAGGTGCTGATGGTCAGGGGAGCTCAGCTGCTGGTCGGGGTGGTGGTGGTGATGGAGAGGAAGCTAAGTAG

Protein sequence

MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTDARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK

Homology

[Close]

BLAST of Lag0020616 vs. NCBI nr
Match: XP_023550144.1 (GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo] >XP_023550145.1 GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.3 bits (1004), Expect = 5.3e-105
Identity = 208/217 (95.85%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPA+QQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAIQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEG LGGA AGGPARSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGTLGGASAGGPARSSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RGGGKQDSADVGG GADGQG+SA GRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADGQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. NCBI nr
Match: XP_004138447.1 (GRF1-interacting factor 3 [Cucumis sativus] >KGN45750.1 hypothetical protein Csa_005109 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 9.0e-105
Identity = 208/217 (95.85%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE  LGGA AGGP RSSGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RG GKQDSADVGGAG DGQGS+A GRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. NCBI nr
Match: XP_022939603.1 (GRF1-interacting factor 3-like [Cucurbita moschata] >XP_022939605.1 GRF1-interacting factor 3-like [Cucurbita moschata])

HSP 1 Score: 390.6 bits (1002), Expect = 9.0e-105
Identity = 208/217 (95.85%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEG LGGA AGGPARSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGTLGGASAGGPARSSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RGGGKQDSADVGG GAD QG+SA GRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. NCBI nr
Match: XP_038885310.1 (GRF1-interacting factor 3-like [Benincasa hispida] >XP_038885311.1 GRF1-interacting factor 3-like [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 209/217 (96.31%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE  L GA AGGP R SGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RGGGKQDSADVGGAGADGQGSSA GRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. NCBI nr
Match: XP_022993755.1 (GRF1-interacting factor 3-like [Cucurbita maxima] >XP_022993756.1 GRF1-interacting factor 3-like [Cucurbita maxima])

HSP 1 Score: 388.3 bits (996), Expect = 4.4e-104
Identity = 207/217 (95.39%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE  LGGA AGGPARSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEATLGGASAGGPARSSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RGGGKQDSADVGG GAD QG+SA GRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. ExPASy Swiss-Prot
Match: Q93VH6 (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.6e-54
Identity = 148/233 (63.52%), Postives = 166/233 (71.24%), Query Frame = 0


Query: 1   MQQPPQMMPM-MPSFPPT-NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQ 60
           MQQ PQM+PM +PSFPPT NITTEQIQKYLDENKKLI+AIL+NQNLGKLAECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  KNLMYLAAIADAQPQAP-------AMPPQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--S 120
           KNLMYLAAIADAQPQ P       AM PQ MAP+P+  Q    Y+MQ  QA  MAQQ   
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 GLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIG-GANNGMHHP-HHTEGAL 180
           G+FPP+ PLQFG+PHQ  DPQQQL   HQQAMQG MG+RP+G   NNG+ H  HH E AL
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQL---HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 180

Query: 181 GGAGAGGPARSSGQTDARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
                   A ++G  DA GGGK D  ++  +GADGQG SAA  GGG    E K
Sbjct: 181 A-------ANNAGPNDASGGGKPDGTNMSQSGADGQGGSAARHGGGDAKTEGK 223

[Close]

BLAST of Lag0020616 vs. ExPASy Swiss-Prot
Match: Q9MAL9 (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.6e-46
Identity = 127/211 (60.19%), Postives = 140/211 (66.35%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 61
           QQ PQM PM+PS PP  NITTEQIQKYLDENKKLI+AI++NQNLGKLAECAQYQA LQKN
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKN 63

Query: 62  LMYLAAIADAQPQAP--------AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPP 121
           LMYLAAIADAQP  P        A+  QMA PH  MQ   Y+MQHPQA+     +G+F P
Sbjct: 64  LMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAP 123

Query: 122 KVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHP-HHTEGALGGAGAG 181
           + PLQFG+P Q QDPQQQ  Q HQQAMQG MG+RP+G  NNGM H     E  LGG    
Sbjct: 124 RGPLQFGSPLQFQDPQQQ-QQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGG---- 183

Query: 182 GPARSSGQTDARGGGKQDSADVGGAGADGQG 202
                        GGKQD       GADGQG
Sbjct: 184 --------NVGLRGGKQD-------GADGQG 190

[Close]

BLAST of Lag0020616 vs. ExPASy Swiss-Prot
Match: Q6AVI1 (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.1e-19
Identity = 86/203 (42.36%), Postives = 111/203 (54.68%), Query Frame = 0


Query: 16  PTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP 75
           PT +TT+ IQ+YLDENK+LILAILDNQN GK+ ECA+ QA+LQ NLMYLAAIAD+QP   
Sbjct: 20  PTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADSQPPQT 79

Query: 76  AMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQ 135
           A   Q   +  MQ G  YM    A +MA QS L   +  + +  P     P QQ  QQ  
Sbjct: 80  AAMSQYPSNLMMQSGARYMPQQSAQMMAPQS-LMAARSSMMYAQP--ALSPLQQQQQQQA 139

Query: 136 QAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD------ARGGGKQDS 195
            A  GQ+G+   GG  +G     H E ++GG G GG A +S           RGGG    
Sbjct: 140 AAAHGQLGMGS-GGTTSGF-SILHGEASMGGGGGGGGAGNSMMNAGVFSDFGRGGGGGGK 199

Query: 196 ADVGGAGADGQGSSAAGRGGGGD 213
                   D +G+++  + G G+
Sbjct: 200 EGSTSLSVDVRGANSGAQSGDGE 217

[Close]

BLAST of Lag0020616 vs. ExPASy Swiss-Prot
Match: Q8L8A5 (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 84/216 (38.89%), Postives = 113/216 (52.31%), Query Frame = 0


Query: 6   QMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLA 65
           QM PMM  + P+N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLA
Sbjct: 7   QMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLA 66

Query: 66  AIADAQPQAPAMPPQMAPHPA----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGN 125
           AIAD+QPQ P++  Q           + G +Y+Q  QA    Q  Q  L   +  + +  
Sbjct: 67  AIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQ 126

Query: 126 PHQLQDPQQQLHQQHQQAMQGQMGLRPI--GGANNGMHHPHHTEGALGGAGAGGPARSSG 185
             Q Q P   L  QHQQ    Q+G+     GG ++G+H      G     G G P   SG
Sbjct: 127 QQQQQQPYATL--QHQQLHHSQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSG 186

Query: 186 QTDARGGGKQDSADVGGAGADGQGSSAAGRGGGGDG 214
                GGG+      G  G+ G G          DG
Sbjct: 187 -----GGGE------GRGGSSGDGGETLYLKSSDDG 209

[Close]

BLAST of Lag0020616 vs. ExPASy Swiss-Prot
Match: A5HEH4 (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.8e-15
Identity = 92/228 (40.35%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQ    MM    S  P  +TT+ IQ+YLDENK+LILAILDNQN GK  EC ++QA+LQ N
Sbjct: 7   MQMNQNMMGGYTS--PAAVTTDLIQQYLDENKQLILAILDNQNNGKAEECERHQAKLQHN 66

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIAD+QP   A   Q   +  MQ G  YM  PQ+  M     L   +  + + +P
Sbjct: 67  LMYLAAIADSQPPQTAPLSQYPSNLMMQPGPRYMP-PQSGQMMNPQSLMAARSSMMYAHP 126

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPH---HTEGALGGAGAGGPARS-- 180
                P QQ     QQA  GQ+G+ P GG   G        H E ++GG GAG  A +  
Sbjct: 127 S--LSPLQQ-----QQAAHGQLGMAP-GGGGGGTTSGFSILHGEASMGGGGAGAGAGNNM 186

Query: 181 ------SGQTDARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
                 SG   +  G K+ S  +     D +G +++G    GDGE  K
Sbjct: 187 MNAGMFSGFGRSGSGAKEGSTSL---SVDVRGGTSSG-AQSGDGEYLK 219

[Close]

BLAST of Lag0020616 vs. ExPASy TrEMBL
Match: A0A6J1FN71 (GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445449 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.3e-105
Identity = 208/217 (95.85%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEG LGGA AGGPARSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGTLGGASAGGPARSSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RGGGKQDSADVGG GAD QG+SA GRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. ExPASy TrEMBL
Match: A0A0A0K7M8 (SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.3e-105
Identity = 208/217 (95.85%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE  LGGA AGGP RSSGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RG GKQDSADVGGAG DGQGS+A GRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. ExPASy TrEMBL
Match: A0A6J1JX83 (GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 207/217 (95.39%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE  LGGA AGGPARSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEATLGGASAGGPARSSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RGGGKQDSADVGG GAD QG+SA GRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. ExPASy TrEMBL
Match: A0A1S4DTX1 (GRF1-interacting factor 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.8e-104
Identity = 206/217 (94.93%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE  LG A AGGP RSSGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTD 180

Query: 181 ARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
            RG GKQDSADVGGAG DGQG++A GRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGNAAGGRGGGGDGEEAK 217

[Close]

BLAST of Lag0020616 vs. ExPASy TrEMBL
Match: A0A1S4DTY1 (GRF1-interacting factor 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 206/220 (93.64%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPP---QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120
           LMYLAAIADAQPQAPAMPP   QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF
Sbjct: 61  LMYLAAIADAQPQAPAMPPQNGQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120

Query: 121 GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGALGGAGAGGPARSSG 180
           GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE  LG A AGGP RSSG
Sbjct: 121 GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSG 180

Query: 181 QTDARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
           QTD RG GKQDSADVGGAG DGQG++A GRGGGGDGEEAK
Sbjct: 181 QTDGRGSGKQDSADVGGAGTDGQGNAAGGRGGGGDGEEAK 220

[Close]

BLAST of Lag0020616 vs. TAIR 10
Match: AT4G00850.1 (GRF1-interacting factor 3 )

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-55
Identity = 148/233 (63.52%), Postives = 166/233 (71.24%), Query Frame = 0


Query: 1   MQQPPQMMPM-MPSFPPT-NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQ 60
           MQQ PQM+PM +PSFPPT NITTEQIQKYLDENKKLI+AIL+NQNLGKLAECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  KNLMYLAAIADAQPQAP-------AMPPQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--S 120
           KNLMYLAAIADAQPQ P       AM PQ MAP+P+  Q    Y+MQ  QA  MAQQ   
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 GLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIG-GANNGMHHP-HHTEGAL 180
           G+FPP+ PLQFG+PHQ  DPQQQL   HQQAMQG MG+RP+G   NNG+ H  HH E AL
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQL---HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 180

Query: 181 GGAGAGGPARSSGQTDARGGGKQDSADVGGAGADGQGSSAAGRGGGGDGEEAK 218
                   A ++G  DA GGGK D  ++  +GADGQG SAA  GGG    E K
Sbjct: 181 A-------ANNAGPNDASGGGKPDGTNMSQSGADGQGGSAARHGGGDAKTEGK 223

[Close]

BLAST of Lag0020616 vs. TAIR 10
Match: AT1G01160.1 (GRF1-interacting factor 2 )

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-47
Identity = 127/211 (60.19%), Postives = 140/211 (66.35%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 61
           QQ PQM PM+PS PP  NITTEQIQKYLDENKKLI+AI++NQNLGKLAECAQYQA LQKN
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKN 63

Query: 62  LMYLAAIADAQPQAP--------AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPP 121
           LMYLAAIADAQP  P        A+  QMA PH  MQ   Y+MQHPQA+     +G+F P
Sbjct: 64  LMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAP 123

Query: 122 KVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHP-HHTEGALGGAGAG 181
           + PLQFG+P Q QDPQQQ  Q HQQAMQG MG+RP+G  NNGM H     E  LGG    
Sbjct: 124 RGPLQFGSPLQFQDPQQQ-QQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGG---- 183

Query: 182 GPARSSGQTDARGGGKQDSADVGGAGADGQG 202
                        GGKQD       GADGQG
Sbjct: 184 --------NVGLRGGKQD-------GADGQG 190

[Close]

BLAST of Lag0020616 vs. TAIR 10
Match: AT1G01160.2 (GRF1-interacting factor 2 )

HSP 1 Score: 169.5 bits (428), Expect = 3.0e-42
Identity = 127/245 (51.84%), Postives = 140/245 (57.14%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQK---------------------------------- 61
           QQ PQM PM+PS PP  NITTEQIQK                                  
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWLD 63

Query: 62  YLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP--------AMP 121
           YLDENKKLI+AI++NQNLGKLAECAQYQA LQKNLMYLAAIADAQP  P        A+ 
Sbjct: 64  YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 123

Query: 122 PQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQA 181
            QMA PH  MQ   Y+MQHPQA+     +G+F P+ PLQFG+P Q QDPQQQ  Q HQQA
Sbjct: 124 AQMATPHSGMQPPSYFMQHPQAS----PAGIFAPRGPLQFGSPLQFQDPQQQ-QQIHQQA 183

Query: 182 MQGQMGLRPIGGANNGMHHP-HHTEGALGGAGAGGPARSSGQTDARGGGKQDSADVGGAG 202
           MQG MG+RP+G  NNGM H     E  LGG                 GGKQD       G
Sbjct: 184 MQGHMGIRPMGMTNNGMQHAMQQPETGLGG------------NVGLRGGKQD-------G 224

[Close]

BLAST of Lag0020616 vs. TAIR 10
Match: AT5G28640.1 (SSXT family protein )

HSP 1 Score: 91.7 bits (226), Expect = 8.0e-19
Identity = 84/216 (38.89%), Postives = 113/216 (52.31%), Query Frame = 0


Query: 6   QMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLA 65
           QM PMM  + P+N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLA
Sbjct: 7   QMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLA 66

Query: 66  AIADAQPQAPAMPPQMAPHPA----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGN 125
           AIAD+QPQ P++  Q           + G +Y+Q  QA    Q  Q  L   +  + +  
Sbjct: 67  AIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQ 126

Query: 126 PHQLQDPQQQLHQQHQQAMQGQMGLRPI--GGANNGMHHPHHTEGALGGAGAGGPARSSG 185
             Q Q P   L  QHQQ    Q+G+     GG ++G+H      G     G G P   SG
Sbjct: 127 QQQQQQPYATL--QHQQLHHSQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSG 186

Query: 186 QTDARGGGKQDSADVGGAGADGQGSSAAGRGGGGDG 214
                GGG+      G  G+ G G          DG
Sbjct: 187 -----GGGE------GRGGSSGDGGETLYLKSSDDG 209

The following BLAST results are available for this feature:

BLAST of Lag0020616 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550144.1	5.3e-105	95.85	GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo] >XP_023550145.1 GRF1...	[more]
XP_004138447.1	9.0e-105	95.85	GRF1-interacting factor 3 [Cucumis sativus] >KGN45750.1 hypothetical protein Csa...	[more]
XP_022939603.1	9.0e-105	95.85	GRF1-interacting factor 3-like [Cucurbita moschata] >XP_022939605.1 GRF1-interac...	[more]
XP_038885310.1	1.5e-104	96.31	GRF1-interacting factor 3-like [Benincasa hispida] >XP_038885311.1 GRF1-interact...	[more]
XP_022993755.1	4.4e-104	95.39	GRF1-interacting factor 3-like [Cucurbita maxima] >XP_022993756.1 GRF1-interacti...	[more]

BLAST of Lag0020616 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VH6	2.6e-54	63.52	GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1	[more]
Q9MAL9	2.6e-46	60.19	GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1	[more]
Q6AVI1	2.1e-19	42.36	GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 S...	[more]
Q8L8A5	1.1e-17	38.89	GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1	[more]
A5HEH4	6.8e-15	40.35	GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1	[more]

BLAST of Lag0020616 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FN71	4.3e-105	95.85	GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445449 PE=...	[more]
A0A0A0K7M8	4.3e-105	95.85	SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 S...	[more]
A0A6J1JX83	2.2e-104	95.39	GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 ...	[more]
A0A1S4DTX1	4.8e-104	94.93	GRF1-interacting factor 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=...	[more]
A0A1S4DTY1	2.0e-102	93.64	GRF1-interacting factor 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=...	[more]

BLAST of Lag0020616 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00850.1	1.8e-55	63.52	GRF1-interacting factor 3	[more]
AT1G01160.1	1.8e-47	60.19	GRF1-interacting factor 2	[more]
AT1G01160.2	3.0e-42	51.84	GRF1-interacting factor 2	[more]
AT5G28640.1	8.0e-19	38.89	SSXT family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18, N-terminal	PFAM	PF05030	SSXT	coord: 18..73 e-value: 3.3E-22 score: 77.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..217
None	No IPR available	PANTHER	PTHR23107:SF26	BNAA09G51550D PROTEIN	coord: 1..189
IPR044779	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 1..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0020616.1	Lag0020616.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0048366	leaf development
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity