
Lag0020550 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTCCAGAGAGGCCTGGTATCCTTCTTTCCTCTCTTCTACACCCATTGTGCCTCTTCATTTTCTTATATCTGATTTCTCATCCATTTGCCTTTCGGTCTACCTGCCTTTTCCTTTGATTAACAACTCTACTTTTTTCTTCAGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAGGGCTTTTCTCTAAAAGGTAATTACTTTCTGAGTGCTTTATGAATTCCCTGTTATGTTTTTTTTTACTGAAGTTATTATTTTTCTTTTTCCGATTTTGTGTGTGTCCTTTTCTTATGTGTTGATGTGAACTCGGATGACTGTTTTGGCTTGGATTTTTCCAACTTTTTTTTTTTGCTTGTCTGCTCTTGAGTTGAGTTTGAGTTTGAGTCTGAAAGAAATCTTGTTATGCACATCCCATCTGCAATCAGCAGTTTAAATACTATTGAGTTTAGAACGTTGCTGATTTTGTATAACATGATGTAAGTTAGGTTTGAAGTTTATGTCTGTGGATCGTGCTTTTGCTGAGAACCATTACTCTGATCTTGCTGGCAAGCCCTTTTTCAATGGGTTGATTGAGTACATAATTTCTGGCCCTGTCGTTGCCATGATCTGGGAGGGGAAGAATGTCGTTGCAACTGGTAGGAAGATCATTGGAGCCACGAAGCCATTTGAATCTGATGTAGGAACCATCCGTGGTGACTTTGCAATTGATGTTGGCAGGTAATGATTTGAAATGAATGAATTTCTTTATACAAGTTGATAAAGAGAAGAGGCGTGTGGATGATGGATTGTTGGTTTTCACTTTTCAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCGAGGAAGGAAATTGCTCTGTGGTTCCCGGAAGGTCCTGTTAGCTGGCAGAGCAGCCTCCATTCCTGGATCTACGAGTGA ATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTCCAGAGAGGCCTGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAGGGCTTTTCTCTAAAAGGTTTGAAGTTTATGTCTGTGGATCGTGCTTTTGCTGAGAACCATTACTCTGATCTTGCTGGCAAGCCCTTTTTCAATGGGTTGATTGAGTACATAATTTCTGGCCCTGTCGTTGCCATGATCTGGGAGGGGAAGAATGTCGTTGCAACTGGTAGGAAGATCATTGGAGCCACGAAGCCATTTGAATCTGATGTAGGAACCATCCGTGGTGACTTTGCAATTGATGTTGGCAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCGAGGAAGGAAATTGCTCTGTGGTTCCCGGAAGGTCCTGTTAGCTGGCAGAGCAGCCTCCATTCCTGGATCTACGAGTGA ATGGAGCAGAGCTTTATCATGATCAAGCCTGATGGAGTCCAGAGAGGCCTGGTTGGAGAGATTATCAGTAGGTTTGAGAAGAAGGGCTTTTCTCTAAAAGGTTTGAAGTTTATGTCTGTGGATCGTGCTTTTGCTGAGAACCATTACTCTGATCTTGCTGGCAAGCCCTTTTTCAATGGGTTGATTGAGTACATAATTTCTGGCCCTGTCGTTGCCATGATCTGGGAGGGGAAGAATGTCGTTGCAACTGGTAGGAAGATCATTGGAGCCACGAAGCCATTTGAATCTGATGTAGGAACCATCCGTGGTGACTTTGCAATTGATGTTGGCAGGAACATCATTCATGGAAGTGACTCGGTGGAGAGTGCGAGGAAGGAAATTGCTCTGTGGTTCCCGGAAGGTCCTGTTAGCTGGCAGAGCAGCCTCCATTCCTGGATCTACGAGTGA MEQSFIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKFMSVDRAFAENHYSDLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPFESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEGPVSWQSSLHSWIYE Homology
BLAST of Lag0020550 vs. NCBI nr
Match: XP_022152788.1 (nucleoside diphosphate kinase [Momordica charantia]) HSP 1 Score: 300.8 bits (769), Expect = 6.4e-78 Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Lag0020550 vs. NCBI nr
Match: XP_008437761.1 (PREDICTED: nucleoside diphosphate kinase [Cucumis melo] >KAA0048802.1 nucleoside diphosphate kinase [Cucumis melo var. makuwa] >TYK20754.1 nucleoside diphosphate kinase [Cucumis melo var. makuwa]) HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76 Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Lag0020550 vs. NCBI nr
Match: XP_004133759.1 (nucleoside diphosphate kinase [Cucumis sativus] >KGN56334.1 hypothetical protein Csa_011246 [Cucumis sativus]) HSP 1 Score: 295.0 bits (754), Expect = 3.5e-76 Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of Lag0020550 vs. NCBI nr
Match: XP_038897694.1 (nucleoside diphosphate kinase [Benincasa hispida]) HSP 1 Score: 294.7 bits (753), Expect = 4.6e-76 Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of Lag0020550 vs. NCBI nr
Match: XP_022935681.1 (nucleoside diphosphate kinase [Cucurbita moschata] >XP_022974268.1 nucleoside diphosphate kinase [Cucurbita maxima] >XP_023540209.1 nucleoside diphosphate kinase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540210.1 nucleoside diphosphate kinase isoform X2 [Cucurbita pepo subsp. pepo] >KAG6597004.1 hypothetical protein SDJN03_10184, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75 Identity = 142/148 (95.95%), Postives = 145/148 (97.97%), Query Frame = 0
BLAST of Lag0020550 vs. ExPASy Swiss-Prot
Match: Q56E62 (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 2.3e-70 Identity = 124/148 (83.78%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of Lag0020550 vs. ExPASy Swiss-Prot
Match: O81372 (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum OX=3544 GN=NDKP1 PE=2 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 5.1e-70 Identity = 123/148 (83.11%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of Lag0020550 vs. ExPASy Swiss-Prot
Match: Q02254 (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea OX=3562 GN=NDPK1 PE=2 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 1.9e-69 Identity = 121/148 (81.76%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of Lag0020550 vs. ExPASy Swiss-Prot
Match: P47922 (Nucleoside diphosphate kinase 1 OS=Pisum sativum OX=3888 GN=NDPK1 PE=2 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 2.5e-69 Identity = 121/147 (82.31%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of Lag0020550 vs. ExPASy Swiss-Prot
Match: Q9M7P6 (Nucleoside diphosphate kinase OS=Capsicum annuum OX=4072 PE=2 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 5.6e-69 Identity = 120/148 (81.08%), Postives = 134/148 (90.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|