Lag0020190 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0020190
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	dof zinc finger protein DOF3.4-like
Location	chr5: 48702419 .. 48704465 (-)
RNA-Seq Expression	Lag0020190
Synteny	Lag0020190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCCGACGCCGACGACCATCGCAAGACCGCCACCAAGCCCCTCAGCTCTGGCGGGGCCTGCCCTCCGCCGGAGCAAGAGCACCTTCCTTGCCCACGATGTGATTCTACTAATACCAAGTTCTGTTACTACAATAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGTCGCCGTTACTGGACCCACGGTGGGACCCTCTGGGACATTCCCGTTGGCGGTGGAAGCAAGAAAAATGCCAAGCGCTCTCGTACTTGCATTCCGACGGCAGTTGTTTCTTCTTCATCTGGGTCATTGACTAATTCTGTTTCTCGGTTGGATCATCATCTGTTGCCGGCGACCCGGTGCAGGTGCCGCTCGTCAGTGGCCATGGTGGGGGAGTTCAGTTCGGCGGCAGCGGGGGGGAGTTTAAGGCCGGTGGGAATATGTGTGGGGCAATTCAGGAATATAAAAAATTAATTCAAAATTTTTGCCATAGTTGCAAATATTCTTAAAAATTGCTATATTTGCCATTATTTACCCTCATGTTGCCACCCATTACAATTATCCGCAAACAAATGGTGGAACTTAACACTAAGGACGTGGAATGTGCCTAATAACCCATTAAGTTGGAAAAGATTCAAGGAGCTTTTCTTCGAGAAGTTTTTTCCCCCTACTGTTAGACAAGATAAGGAAGCTGAGTTCATTGGTCAATCTAATTTCCTTCCAATATAGCCAAACTTGTTTTATCATAATGACCTGCGGTCTGTAAATTTTGTATCTCTCTCTTAAGTTTCAACTTTTTTCCCATTGTAGCTTTAGTTTTCTTTTTTGGTGGTCTGGGTATTGAGTCGGTTGGAAGAGCCATGATGCATAAATCATGCTTGCTAAGCATTGGAGCTAGGTGGCGGAGATAGGATGGAAGGGAAAGGGATGATGGTTCATGTGGGGAGCAATTTTATTTCTGTAAAGGGGTGACTTCTTTTGTGGGAGAGGGAATAATGGGGGAAGACGATGGTATGTGGGAGGAAGTTGTTCTGACTCGGTAAAAGGTATTTCATCAAATATTGCAAGGTCTAAATTGCACGGTGAGGCGAGGTCACAAGCCGAGGTATGGTGCGAATCTCCATTGGTTGGACTTGTTATGTATGCTTCTATATCAGATTCCATAATCATAGTGCCTGAAGATTCCTCTTTTCCCCTAAACAAAGAGTGGGACCGCTGGTAGAAGAAAATCAATATGGCTCTCTGTCACTATGGGGGAGGGCATATGGAGGGGTGTTTTACCTTTAATGGAGTATGCTGGCAAATTGCCATGATCTCTCAGTATTGATAATTTTGGAGCATCAATTGGCAAAATGGATAAATCATCTGAAATTGCTAAATCAGGAATAAAATCTTCATTTTTAGGAGTTGAATTTATTTCATTTGGGGCCACAGTCAATTTGGAATTTTCAAATCCCAAATTCTCACTCTTCTTAACTTCCAAATCAAGCAAATCCGAAAATGGGGGGATTCCGCAAATCTCACCGGATTGAAAAAGTTGTTCGTCAGTTCTGGGATTCTACTGTAACATTGTTGCTGGCAAGGGATGAAGGGATCATAATTCTAAACGGGATGAAACCAGCGGAATTTTGATGAATTTTTAATTTTGTCGCTGTGAGGTTTAGCTTTCGGTTGGTATGATTGGATGTTTCGATGAATCCTCCACAACAATCTCCAATAAAGTTTACCTATGTTGTTTCCTGTCAAATATATGTGCAACAAAAGCAGAGAAAAGCTCCAAAGGTTTCTGATATTGCCTTCTTGTTGCAGAGAATTTTCGGATGTGAATAAGGACATCAACTGGGTTATATCTCTAGAAAATGCTTTCAGCAATCAATATGAACTTTATGTCTTTGATGATGATTATTCTGCACTTCTTCACAGGCTTGGTTTGGCAAAAGAAATGGGATTGGTTGCAACATCCCATTTGGATACGGTATTGGAAAAGCTGAAAGATATTCTGGTTAATGTGGAGCATAGTTTTTCTCCTGAGATTCCTGTTCTGTTGCTCTGA

mRNA sequence

ATGCCTTCCGACGCCGACGACCATCGCAAGACCGCCACCAAGCCCCTCAGCTCTGGCGGGGCCTGCCCTCCGCCGGAGCAAGAGCACCTTCCTTGCCCACGATGTGATTCTACTAATACCAAGTTCTGTTACTACAATAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGTCGCCGTTACTGGACCCACGGTGGGACCCTCTGGGACATTCCCGTTGGCGGTGGAAGCAAGAAAAATGCCAAGCGCTCTCGTACTTGCATTCCGACGGCAGTTGTTTCTTCTTCATCTGGGTCATTGACTAATTCTGTTTCTCGGTTGGATCATCATCTGTTGCCGGCGACCCGGTGCAGGTGCCGCTCGTCAGTGGCCATGGTGGGGGAGTTCAGTTCGGCGGCAGCGGGGGGGAGTTTAAGGCCGGATGGAAGGGAAAGGGATGATGGTTCATGTGGGGAGCAATTTTATTTCTGTAAAGGGGTGACTTCTTTTGTGGGAGAGGGAATAATGGGGGAAGACGATGGTATGTGGGAGGAAGTTGTTCTGACTCGAGAATTTTCGGATGTGAATAAGGACATCAACTGGGTTATATCTCTAGAAAATGCTTTCAGCAATCAATATGAACTTTATGTCTTTGATGATGATTATTCTGCACTTCTTCACAGGCTTGGTTTGGCAAAAGAAATGGGATTGGTTGCAACATCCCATTTGGATACGGTATTGGAAAAGCTGAAAGATATTCTGGTTAATGTGGAGCATAGTTTTTCTCCTGAGATTCCTGTTCTGTTGCTCTGA

Coding sequence (CDS)

ATGCCTTCCGACGCCGACGACCATCGCAAGACCGCCACCAAGCCCCTCAGCTCTGGCGGGGCCTGCCCTCCGCCGGAGCAAGAGCACCTTCCTTGCCCACGATGTGATTCTACTAATACCAAGTTCTGTTACTACAATAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGTCGCCGTTACTGGACCCACGGTGGGACCCTCTGGGACATTCCCGTTGGCGGTGGAAGCAAGAAAAATGCCAAGCGCTCTCGTACTTGCATTCCGACGGCAGTTGTTTCTTCTTCATCTGGGTCATTGACTAATTCTGTTTCTCGGTTGGATCATCATCTGTTGCCGGCGACCCGGTGCAGGTGCCGCTCGTCAGTGGCCATGGTGGGGGAGTTCAGTTCGGCGGCAGCGGGGGGGAGTTTAAGGCCGGATGGAAGGGAAAGGGATGATGGTTCATGTGGGGAGCAATTTTATTTCTGTAAAGGGGTGACTTCTTTTGTGGGAGAGGGAATAATGGGGGAAGACGATGGTATGTGGGAGGAAGTTGTTCTGACTCGAGAATTTTCGGATGTGAATAAGGACATCAACTGGGTTATATCTCTAGAAAATGCTTTCAGCAATCAATATGAACTTTATGTCTTTGATGATGATTATTCTGCACTTCTTCACAGGCTTGGTTTGGCAAAAGAAATGGGATTGGTTGCAACATCCCATTTGGATACGGTATTGGAAAAGCTGAAAGATATTCTGGTTAATGTGGAGCATAGTTTTTCTCCTGAGATTCCTGTTCTGTTGCTCTGA

Protein sequence

MPSDADDHRKTATKPLSSGGACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATRCRCRSSVAMVGEFSSAAAGGSLRPDGRERDDGSCGEQFYFCKGVTSFVGEGIMGEDDGMWEEVVLTREFSDVNKDINWVISLENAFSNQYELYVFDDDYSALLHRLGLAKEMGLVATSHLDTVLEKLKDILVNVEHSFSPEIPVLLL

Homology

[Close]

BLAST of Lag0020190 vs. NCBI nr
Match: XP_023518495.1 (dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-56
Identity = 116/156 (74.36%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPSDA DH KTATKPL+SGG CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAADHLKTATKPLASGGLCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RRYWTHGGTLWDIPVGGGSKKNAKRSRTCIP------TAVVSSSSGSLTNSVSRLDHHLL 120
           RRYWTHGGTL DIPVGGGS+KNAKRSRTCIP      T+VVSSSSGSLTNSVS+LDHH L
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAAATSVVSSSSGSLTNSVSQLDHHSL 120

Query: 121 PATRCRCRSSVAMVG------EFSSAAAGGSLRPDG 145
           PAT       V +VG      +F     GG L+  G
Sbjct: 121 PAT----PFLVPLVGGHSGGLQFGGGGGGGELKAGG 152

[Close]

BLAST of Lag0020190 vs. NCBI nr
Match: XP_023003604.1 (dof zinc finger protein DOF3.4-like [Cucurbita maxima])

HSP 1 Score: 229.2 bits (583), Expect = 4.2e-56
Identity = 116/154 (75.32%), Postives = 122/154 (79.22%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPSDA DH KTATKPL+SGG CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RRYWTHGGTLWDIPVGGGSKKNAKRSRTCIP-----TAVVSSSSGSLTNSVSRLDHHLLP 120
           RRYWTHGGTL DIPVGGGS+KNAKRSRTCIP     T+VVSSSSGSLTNSVS+LDHH LP
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAATSVVSSSSGSLTNSVSQLDHHSLP 120

Query: 121 ATRCRCRSSVAMVGEFS-----SAAAGGSLRPDG 145
           AT       V +VG  S         GG L+  G
Sbjct: 121 AT----PFLVPLVGGHSGGLQFGGGGGGELKAGG 150

[Close]

BLAST of Lag0020190 vs. NCBI nr
Match: XP_022963128.1 (dof zinc finger protein DOF3.4-like [Cucurbita moschata])

HSP 1 Score: 228.4 bits (581), Expect = 7.2e-56
Identity = 116/155 (74.84%), Postives = 122/155 (78.71%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPSDA DH KTATKPL+SGG CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGLCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RRYWTHGGTLWDIPVGGGSKKNAKRSRTCIP------TAVVSSSSGSLTNSVSRLDHHLL 120
           RRYWTHGGTL DIPVGGGS+KNAKRSRTCIP      T+VVSSSSGSLTNSVS+LDHH L
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAAATSVVSSSSGSLTNSVSQLDHHSL 120

Query: 121 PATRCRCRSSVAMVGEFS-----SAAAGGSLRPDG 145
           PAT       V +VG  S         GG L+  G
Sbjct: 121 PAT----PFLVPLVGGHSGGLQFGGGGGGELKAGG 151

[Close]

BLAST of Lag0020190 vs. NCBI nr
Match: KAG6595058.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027075.1 Dof zinc finger protein DOF3.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.0 bits (580), Expect = 9.4e-56
Identity = 116/156 (74.36%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPSDA DH KTATKPL+SGG CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGLCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RRYWTHGGTLWDIPVGGGSKKNAKRSRTCIP-------TAVVSSSSGSLTNSVSRLDHHL 120
           RRYWTHGGTL DIPVGGGS+KNAKRSRTCIP       T+VVSSSSGSLTNSVS+LDHH 
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAAAATSVVSSSSGSLTNSVSQLDHHS 120

Query: 121 LPATRCRCRSSVAMVGEFS-----SAAAGGSLRPDG 145
           LPAT       V +VG  S         GG L+  G
Sbjct: 121 LPAT----PFLVPLVGGHSGGLQFGGGGGGELKAGG 152

[Close]

BLAST of Lag0020190 vs. NCBI nr
Match: XP_038883004.1 (dof zinc finger protein DOF3.4-like [Benincasa hispida])

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-54
Identity = 106/120 (88.33%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGA-CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSDA DHRKTATKP  SGG+ CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKTATKPFGSGGSVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIP--TAVVSSSSGSLTNSVSRLDHHLLPAT 118
           CRRYWTHGGTL DIPVGGGS+KNAKRSRTC+P   AVVSSSSGS TNSVSRLDHH LP T
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCMPASAAVVSSSSGSFTNSVSRLDHHSLPTT 120

[Close]

BLAST of Lag0020190 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-32
Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = 0


Query: 3   SDADDHRKTATKPLSSGGACP-PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR 62
           SD+ + R+ A KP  +G   P   +QE LPCPRCDS+NTKFCYYNNYNFSQPRHFCK+CR
Sbjct: 4   SDSGEPRRIAMKP--NGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACR 63

Query: 63  RYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTAVVSSSSGSLTNS 106
           RYWTHGGTL D+PVGGG++K+AKRSRTC   +  SS SG ++NS
Sbjct: 64  RYWTHGGTLRDVPVGGGTRKSAKRSRTC-SNSSSSSVSGVVSNS 104

[Close]

BLAST of Lag0020190 vs. ExPASy Swiss-Prot
Match: Q9FGD6 (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31
Identity = 65/98 (66.33%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MPSDADDHRKTATKPLSSGG--ACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCK 60
          MPS+  + R+    P   GG  A P  +QE L CPRC+STNTKFCYYNNYNFSQPRHFCK
Sbjct: 1  MPSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCK 60

Query: 61 SCRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTAVVS 97
          SCRRYWTHGGTL DIPVGG S+K++KRSRT    A  S
Sbjct: 61 SCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTS 98

[Close]

BLAST of Lag0020190 vs. ExPASy Swiss-Prot
Match: Q9SX97 (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.9e-28
Identity = 81/210 (38.57%), Postives = 112/210 (53.33%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGACPPPE-QEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPS+ +  R T  +P  S  A PPP   E LPCPRC+ST TKFCYYNNYN +QPR++CKS
Sbjct: 1   MPSEPNQTRPTRVQP--STAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKS 60

Query: 61  CRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATRC 120
           CRRYWT GGTL D+PVGGG+++++ +      T   SSSS S   + +  +     A++ 
Sbjct: 61  CRRYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQT 120

Query: 121 RCRSSVAMVGEFSSAAAGGSLRPD---------GRER------DDGSCGE--QFYFCKGV 180
           +  + ++  G F+S    GS             G E        D S GE      C G 
Sbjct: 121 KVTNLISGHGSFASLLGLGSGNGGLDYGFGYGYGLEEMSIGYLGDSSVGEIPVVDGCGGD 180

Query: 181 TSFVG--EGIMGEDDGMWEEVVLTREFSDV 191
           T  +G  EG  G D  +W  + ++ + +DV
Sbjct: 181 TWQIGEIEGKSGGDSLIWPGLEISMQTNDV 208

[Close]

BLAST of Lag0020190 vs. ExPASy Swiss-Prot
Match: O82155 (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 57/90 (63.33%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 25  PEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLWDIPVGGGSKKNAK 84
           PEQE L CPRCDS NTKFCYYNNYN SQPRHFCK+CRRYWT GG L +IPVGGG++K+ K
Sbjct: 28  PEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNK 87

Query: 85  RSRTCIPTAVVSSSSGSLTNS--VSRLDHH 113
           RS         SS S +L N     + DHH
Sbjct: 88  RSG--------SSPSSNLKNQTVAEKPDHH 109

[Close]

BLAST of Lag0020190 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 26  EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLWDIPVGGGSKKNAKR 85
           EQE L CPRCDS NTKFCYYNNYN SQPRHFCKSCRRYWT GG L ++PVGGGS+KNA +
Sbjct: 25  EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATK 84

Query: 86  SRTCIPTAVVSSSSGSLTNSVSRLD 111
             T   ++  S S+ S        D
Sbjct: 85  RSTSSSSSASSPSNSSQNKKTKNPD 109

[Close]

BLAST of Lag0020190 vs. ExPASy TrEMBL
Match: A0A6J1KTT2 (dof zinc finger protein DOF3.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497154 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.0e-56
Identity = 116/154 (75.32%), Postives = 122/154 (79.22%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPSDA DH KTATKPL+SGG CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RRYWTHGGTLWDIPVGGGSKKNAKRSRTCIP-----TAVVSSSSGSLTNSVSRLDHHLLP 120
           RRYWTHGGTL DIPVGGGS+KNAKRSRTCIP     T+VVSSSSGSLTNSVS+LDHH LP
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAATSVVSSSSGSLTNSVSQLDHHSLP 120

Query: 121 ATRCRCRSSVAMVGEFS-----SAAAGGSLRPDG 145
           AT       V +VG  S         GG L+  G
Sbjct: 121 AT----PFLVPLVGGHSGGLQFGGGGGGELKAGG 150

[Close]

BLAST of Lag0020190 vs. ExPASy TrEMBL
Match: A0A6J1HGU9 (dof zinc finger protein DOF3.4-like OS=Cucurbita moschata OX=3662 GN=LOC111463427 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.5e-56
Identity = 116/155 (74.84%), Postives = 122/155 (78.71%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60
           MPSDA DH KTATKPL+SGG CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC
Sbjct: 1   MPSDAGDHLKTATKPLASGGLCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSC 60

Query: 61  RRYWTHGGTLWDIPVGGGSKKNAKRSRTCIP------TAVVSSSSGSLTNSVSRLDHHLL 120
           RRYWTHGGTL DIPVGGGS+KNAKRSRTCIP      T+VVSSSSGSLTNSVS+LDHH L
Sbjct: 61  RRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPAAAAAATSVVSSSSGSLTNSVSQLDHHSL 120

Query: 121 PATRCRCRSSVAMVGEFS-----SAAAGGSLRPDG 145
           PAT       V +VG  S         GG L+  G
Sbjct: 121 PAT----PFLVPLVGGHSGGLQFGGGGGGELKAGG 151

[Close]

BLAST of Lag0020190 vs. ExPASy TrEMBL
Match: A0A0A0KG50 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490030 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 7.3e-54
Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSG-GACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSDA DHRK  TKPL+SG G CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTA---VVSSSSGSLTNSVSRLDHHLLPA 118
           CRRYWTHGGTL DIPVGGGS+KNAKRSRTCIPT+   V SSSSGS +NSVSRLDHH LPA
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPTSAAIVSSSSSGSFSNSVSRLDHHPLPA 120

[Close]

BLAST of Lag0020190 vs. ExPASy TrEMBL
Match: A0A5D3CLU5 (Dof zinc finger protein DOF3.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005120 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSG-GACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSDA DHRK  TKPL+SG G CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTAVV----SSSSGSLTNSVSRLDHHLLP 118
           CRRYWTHGGTL DIPVGGGS+KNAKRSRTCIP +      SSSSGS +NSVSR+DHH LP
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPASAAIVSSSSSSGSFSNSVSRMDHHPLP 120

[Close]

BLAST of Lag0020190 vs. ExPASy TrEMBL
Match: A0A1S3B0L0 (dof zinc finger protein DOF3.4 OS=Cucumis melo OX=3656 GN=LOC103484745 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 102/121 (84.30%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSG-GACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPSDA DHRK  TKPL+SG G CPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS
Sbjct: 1   MPSDAGDHRKAPTKPLASGSGVCPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60

Query: 61  CRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTA---VVSSSSGSLTNSVSRLDHHLLPA 118
           CRRYWTHGGTL DIPVGGGS+KNAKRSRTCIP +   V SSSSGS +NS SR+DHH LPA
Sbjct: 61  CRRYWTHGGTLRDIPVGGGSRKNAKRSRTCIPASAAIVSSSSSGSFSNSASRMDHHPLPA 120

[Close]

BLAST of Lag0020190 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-33
Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = 0


Query: 3   SDADDHRKTATKPLSSGGACP-PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR 62
           SD+ + R+ A KP  +G   P   +QE LPCPRCDS+NTKFCYYNNYNFSQPRHFCK+CR
Sbjct: 4   SDSGEPRRIAMKP--NGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACR 63

Query: 63  RYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTAVVSSSSGSLTNS 106
           RYWTHGGTL D+PVGGG++K+AKRSRTC   +  SS SG ++NS
Sbjct: 64  RYWTHGGTLRDVPVGGGTRKSAKRSRTC-SNSSSSSVSGVVSNS 104

[Close]

BLAST of Lag0020190 vs. TAIR 10
Match: AT5G66940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-32
Identity = 65/98 (66.33%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MPSDADDHRKTATKPLSSGG--ACPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCK 60
          MPS+  + R+    P   GG  A P  +QE L CPRC+STNTKFCYYNNYNFSQPRHFCK
Sbjct: 1  MPSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCK 60

Query: 61 SCRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTAVVS 97
          SCRRYWTHGGTL DIPVGG S+K++KRSRT    A  S
Sbjct: 61 SCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTS 98

[Close]

BLAST of Lag0020190 vs. TAIR 10
Match: AT1G47655.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-29
Identity = 81/210 (38.57%), Postives = 112/210 (53.33%), Query Frame = 0


Query: 1   MPSDADDHRKTATKPLSSGGACPPPE-QEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKS 60
           MPS+ +  R T  +P  S  A PPP   E LPCPRC+ST TKFCYYNNYN +QPR++CKS
Sbjct: 1   MPSEPNQTRPTRVQP--STAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKS 60

Query: 61  CRRYWTHGGTLWDIPVGGGSKKNAKRSRTCIPTAVVSSSSGSLTNSVSRLDHHLLPATRC 120
           CRRYWT GGTL D+PVGGG+++++ +      T   SSSS S   + +  +     A++ 
Sbjct: 61  CRRYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQT 120

Query: 121 RCRSSVAMVGEFSSAAAGGSLRPD---------GRER------DDGSCGE--QFYFCKGV 180
           +  + ++  G F+S    GS             G E        D S GE      C G 
Sbjct: 121 KVTNLISGHGSFASLLGLGSGNGGLDYGFGYGYGLEEMSIGYLGDSSVGEIPVVDGCGGD 180

Query: 181 TSFVG--EGIMGEDDGMWEEVVLTREFSDV 191
           T  +G  EG  G D  +W  + ++ + +DV
Sbjct: 181 TWQIGEIEGKSGGDSLIWPGLEISMQTNDV 208

[Close]

BLAST of Lag0020190 vs. TAIR 10
Match: AT1G51700.1 (DOF zinc finger protein 1 )

HSP 1 Score: 118.2 bits (295), Expect = 9.8e-27
Identity = 57/90 (63.33%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 25  PEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLWDIPVGGGSKKNAK 84
           PEQE L CPRCDS NTKFCYYNNYN SQPRHFCK+CRRYWT GG L +IPVGGG++K+ K
Sbjct: 28  PEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNK 87

Query: 85  RSRTCIPTAVVSSSSGSLTNS--VSRLDHH 113
           RS         SS S +L N     + DHH
Sbjct: 88  RSG--------SSPSSNLKNQTVAEKPDHH 109

[Close]

BLAST of Lag0020190 vs. TAIR 10
Match: AT3G21270.1 (DOF zinc finger protein 2 )

HSP 1 Score: 118.2 bits (295), Expect = 9.8e-27
Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 26  EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLWDIPVGGGSKKNAKR 85
           EQE L CPRCDS NTKFCYYNNYN SQPRHFCKSCRRYWT GG L ++PVGGGS+KNA +
Sbjct: 25  EQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATK 84

Query: 86  SRTCIPTAVVSSSSGSLTNSVSRLD 111
             T   ++  S S+ S        D
Sbjct: 85  RSTSSSSSASSPSNSSQNKKTKNPD 109

The following BLAST results are available for this feature:

BLAST of Lag0020190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518495.1	1.9e-56	74.36	dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003604.1	4.2e-56	75.32	dof zinc finger protein DOF3.4-like [Cucurbita maxima]	[more]
XP_022963128.1	7.2e-56	74.84	dof zinc finger protein DOF3.4-like [Cucurbita moschata]	[more]
KAG6595058.1	9.4e-56	74.36	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG702...	[more]
XP_038883004.1	1.4e-54	88.33	dof zinc finger protein DOF3.4-like [Benincasa hispida]	[more]

BLAST of Lag0020190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39088	2.0e-32	66.35	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q9FGD6	1.7e-31	66.33	Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV...	[more]
Q9SX97	3.9e-28	38.57	Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV...	[more]
O82155	1.4e-25	63.33	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV...	[more]
Q94AR6	1.4e-25	62.35	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]

BLAST of Lag0020190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTT2	2.0e-56	75.32	dof zinc finger protein DOF3.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497154 ...	[more]
A0A6J1HGU9	3.5e-56	74.84	dof zinc finger protein DOF3.4-like OS=Cucurbita moschata OX=3662 GN=LOC11146342...	[more]
A0A0A0KG50	7.3e-54	86.78	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490030 PE...	[more]
A0A5D3CLU5	1.0e-52	83.61	Dof zinc finger protein DOF3.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B0L0	1.4e-52	84.30	dof zinc finger protein DOF3.4 OS=Cucumis melo OX=3656 GN=LOC103484745 PE=4 SV=1	[more]

BLAST of Lag0020190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50410.1	1.4e-33	66.35	OBF binding protein 1	[more]
AT5G66940.1	1.2e-32	66.33	Dof-type zinc finger DNA-binding family protein	[more]
AT1G47655.1	2.7e-29	38.57	Dof-type zinc finger DNA-binding family protein	[more]
AT1G51700.1	9.8e-27	63.33	DOF zinc finger protein 1	[more]
AT3G21270.1	9.8e-27	62.35	DOF zinc finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 28..84 e-value: 3.4E-31 score: 107.2
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 32..68
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 30..84 score: 28.220295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 1..121
None	No IPR available	PANTHER	PTHR31992:SF12	DOF ZINC FINGER PROTEIN DOF3.4	coord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0020190.1	Lag0020190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding