Lag0020188 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0020188
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr5: 48680001 .. 48687585 (-)
RNA-Seq Expression	Lag0020188
Synteny	Lag0020188

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCACTTTCAATAGAATTCTTTATTTGCAGAATAAATCGAGATGCTCTGGGAACTCTACTGATGGTGAAGGTGGGGTATTTTAAGGAGGCAGCGGACAGGTTTTTGTCTTCAGGAGGAACTCTACCGATGGTGAAGGTGGATATCTATCAAGTTAATTGAACAAAAACAATATTCTTAACCAGATAAAGGTCCCCTAATGGTTAGATCAAAATCATTGAGATTTTGCAGGCATTAGTTCATTCAGAATGTATGCTTAATCCTTTTCATGGACAGTTCCTTTTCATGGACAAAACACTGCTATATTCACGACATTACGTTTTGGAGGGTTCTTATGTTCAGGCTATTTGGAAGTATAAATTATCAGAGAAGGCTAAGGAGTATCTTTGGACTGGCCTTAGAAAATGTGAATACTACGGAAAAGATAGCAAGGAAACGTTGCACCTTCTCCCTTTTCATTAACTGCTGCAAAATGTGCAAGAGTAGTGTAAAAGATCAACGATACTTATCCTGTTTTTGCCCTTTCAGTCATGAATGTTGGTGCAAGCGGCTGCAACATTTTTATTAAGTGTTTCCACAAAGATTGCAAAAAAAAAAGCACTCAGCTTTCATGTGAGCATCTGTTCAAGGAGAAAATTAAAATGCTATGTATGAATGTCGTAAAAGCTATTCTTTGAGAGAGAGATTGTATGGAGATGAATGGAAGAACTTTTGAAGAGGATAAGGAATTTCATGGAGTTTTGAGATCTCCTCAAATACCTAGCTTCTAACTGGGCCACTTTTGTGTAAGCTTATGGCTTTCTTTCTATTCTTGCCAACTGGGCCACTTTTTTGTAAGCCTTATTGCAGCTTCGGTGATGTCATATGGTCCTCTTTTGTACTTGAGCTTTGTAAATATATTTGCGGGTTTCTTATATTTTTAATAATAAAAATATACTGCACTGAAGCACGGCTACATTTGATAACCAACGGCATTTTCCTTATCAGCGTTTAACTTAGCATGGGAAAGAAGGCAAAAAAGCATACTTAATAAGTTGATGCAACAGAACACGAATGCTATAAGTTAAAAATGGAGGAACCTGGACAACAGCAGACCCTTAAAATCCAGCAATTGATCGCCCTCTGATTTTATACACCACCTTCCATCAATATTTCCCACTTCCTAAGCCAAAATTGTAGATGTATCATAATAAAAACAATTAGTCCACTAATCTATATATGTTTACGTTGAAGTATTGATAAAATATTAAATTTAAGTAACCCATTAACTTAAACTTTTGGGTTGAGTGGTGATTTAACACAGTATCAAAGCAAGATATCCAGTGTTCGAACCATAGTAAAGACATTTCTTCTCCAATTAATATTGATTTCCACTTGTTGGGCCTTCTACAAATTTCCAAGCCCGCAAGTGGAGGGAGTGTTCAAGTATTATAAAATATTAAATTTACCATAACCCATCGGCCTAAGCAGGGTTGAGTGGTGATTTAATAGTTTCTTATTATTATAGATAAACATTTATTTAAAAAATAACAAATGAGTTAATACAAGTCCAATCTGATGCTTCTTACCAAAAAGGAAGTTCCACTCTTTGTATTCCTAACTAGGCTGTCCATTAACTGATATAACTGTACATAAAGAAATGATGTTGAATTAAGTATAGTATTAAGAAGGGCATTTATAGCATCAAGCTCATGGAAATTTTTATAAATTGAATCAAAGGCAGCAGTAAGATAATAAGAATCTCATTAGCAGGCAACTTGCAATATGGAAACAAAGGTAGCTAATACTATTACATGTGTGGTAGCGTACAATAAAAACATATCTGGAGTACTACAAAACTTCAGGTAATGTCATTCCTTATATACAAGGAAGAAGAAGGAACATAGGGGTGAGTAGAAAGTATGCAAAACCAAGGTTGTTAAATCGTAAAACGGAACATGTATCGAAATCAAATTTTCATGAATCGTGTATCGTAAGTTTCAATTTAATAAATAATATTTAAATATAAATAAAAATACCATGGTTTAAAATAGAGAAACAAATGGTCAAACATTAAATAAATCTAAAGTAAAAAATAGTTTTTTTACTGTTTCTTAATCCTTATCTTTAATCTTTAAATTTTTAAAATAAATAAAAAAAGAGTTCACAGAGAGAATATAAGTCTTTTCACATTTCTTCATCAGTTTTTTATTTAATTTCTCTTTCTTCCCACTTAATTCGTTTCAATCCATTCACGGTTTTTCATTTTCTGCTTTCTAATTTCTTTTTTTCTTTTTTTAAATCCAGCTGTCTTTTTTACCCACTCTCACAGTTTTCCAGCTGTCTTTTCTATAATTTCTCTCTTTGGATTCACGCCAGCTTTCTTTTCTTTCACCCTCTCTTTCTTTCCAAATAATTTTTCGGTCTCTTTGCCTTCTTCGGCACACTTCGTCTTCTTCAAAATGCTTTGTCTTCTACTCTTCTACTCTTCTTTTACACTTTCTCTCTCCTTCAAGCTTTGAAGTCTCCCTCGCCTCATGCAAAGGGTTTCTTCTCAGCCCGCAAAAACTTCTTCACGAGCGTTTTGCAAAATCACAAGCGTTCTTCTCCGCTGCTTCACAGTTTCTTCTCTGCTGCTTCACAAGGGCTTGTTATCCGACGCTGTCAACTAACCGTTGACCCAAAATCGCAGGTATTTTACCAAAAAAAAATTAGGCTTATTGATTTTTTGAATCGAAACGTTTCAATTCACCTACGATTCCCACGATTCACGATTCAGAAACGTGAATCGTACAAGACATGGAATTTCCGATTCAAAAACACGTTCTGACTCGTTTTCCTTGCGTTTCGATTTGAATCGTACGATTCAAATCGTGAAACGTACGATTTTAATAACATTGTGCAAAACTACTATTTTTTTTTAACAATAAATGAACTTTTCATTAACCCATCATGGGTTGGCCCTAGTGGTCAACAACGGCCATAGAAAAAATAAAGGATTTAGAGGGAATGTGTTCAATTCATGATGGCCACCTACCTAGGATTTAATATCCTACGAGTTTCCTTGGCAACCAAATATAGTAAGGTCAAGCGGTTGTCCTGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCGGACACCTCTAAAATGACGAAGTGTCAGTGTCAGACATGTGTCCGACACGCCATGTGGCGTGTCTTATTTTATTTTATTTTTTTTATTTTTCGACAATTCCGACACGGCTCCGACACGTTTTAGAAAAAAAAAAAATGGGCGTTTTATAAAATTTAATCACGATTTAAATTAGACCCACTCATAGATAGTTCAAGCCCACTCATTCACAACCCCTAGGTCAGTTTTAACTTTTAAGTCTTCTCAGAAGAGAAAATTCGTCCCCCCCCCAAATGCTCTCTCCTCTCTCCTCTCTTCCCTTTCCGTTAGCCTTCATCCGGTAGATCAGTGTAATCCTTTCTTATTCAGTGTAATTTCTTAGCCCTCAACCATTGATTCGTGTCCCAGATTGTCTGCCGAATTTTTATTGTTGCTGCTTTGCTTTCTTTGGGTGGTTCCATCCTCCTTCTCCAATGGAAGTTATCAGCTGTTGTATTCAGAATAGGTATTTTTGTGTTTGGAGGGAAGGAAATATCCATTTTGTTGAAGATACATGCAAAAGAGTTTGATTCCATTGTCCATTTCCTTTTTACAGTGGTTTGAAAAAGTGTTAGTTGAGATTTTGCAAAATCCTGTTTCTTCCTTCTTTCATGAGAAAATTAAGGAAGAATTTGGAGTCATTAGGTTGATTAAGTTCTTCTCGGATAACGAATGGTTCTTTGAATGTGTTGTTTGGCCTTCCACGGGTGGAAGAAGGATTATTCAAGTTCCAGCAGGCTTGGATAAGAAAGGATGGTATGTTTTTTGGGAAATGATTAGGGATTTCATTCTTAAATTTCATTCTTATGAGAATCAACCTATTCGGTCATTGTCGAGCAAAGAGGAGTGTATTCCAGTTTTTTATAAGGTTTCAGAAGGTCAAGTCTTTCCTAATTCATATGCTGAAGTGGTAAAGCGAGGTGGTTCTTTAATAAGTTCAGTTTCATTGAATGATTCAATAAGAAATGTCAAGGGTGTTAATGAAGAAGCTTACTGGGTTCGCAAGAATTGTGATGTGCTGGAAATAGATTTGGAAAGATCAATTGTTGTTTCTAGATTGATGGTCCATTATTCTTGGAAGGATGTTAAGATTGCCCTTGAGAAATTCTTTAAATCTTCTGTCTTGATTAACCCCTTCATGGATGATAAAGCTTTGATTCATGCAGCAGATGGTGGCTTGGAATTTTCTGCAAATGGCAAGTGGAAGAAATTTGGAAACTTACATTTGAAATTGGAATTTTGGTCCTCTGAAATCCATTCACAGCCGAAGTCTATAAAAAGCTATGGAGGTTGGGTTGCAATTAGAAATCTTCCATTGAATTTATGGCATCGTGACTCCTTTGAAGCGATTGGAAAAAACCTTGGAGGGTTGGTTAGTATTTCTTCCAAACGCTTAATTTGTTAGATTGTTCTGAAGCCTTCATTGAAGTAGAAAAGAATTTTTGTGGTTTTATTCCAGCTGATATTAATGTTAAGATTGGTAATAAGTATGAATTTTCTTTAAGATTTGGTGATATTAATTCTTTGGAGAACAGAAATTTGAATATTGATTCAAGAAAAAAGCTAGATGCCAATGACTTTTCAAATTCCCTGGATTTAATTAGGGTAAGGCAGGTGATTTTGGATGAAGAAACTGATATTGTTAATAAAGAGTAAAGGATGAGTGTGCTGCCAGTTATCTCTCGGTATCAGGAGGCATTTAATGAGGATTTGGTTATTTCAAAGGAGGTCTCGGTACAAGATGAATGTATTAAGTGCAATGGTTGTATTATTCCTTCAACCAAATTGATTAATGATGATAGTTGTTTATTGAATAATGAAGATTTGAATGGGGATTTGGTTCTTTCAAAGGATGCCTCGGTACAAGATGTAGGTATTAATTGCAGTGGTTGCTTTATTCCTTCAACAAAGATGATTAATGATGATAGATGTTTTTTGAATAATGAAGTACAACAGACTTTAATAGAGAGAGGCCAAGTTAATGAGATGTTGGGTTCTCCAAAAGGTGCTTCTTTGCATGACAAGAGTATTAATAATGCTGGTTGTAAAGGTTTTAATGCCAGTATTAATGAGCCGGCTTTAGCTCTCTCTCCTTCATTAAATGTCAATGAATTTAATAAGTACAACCATCAGGAAGCCCAACAGTTTCAGGTTTTTGAACTTCCTTCTAAGAATGATAATGTCGTTAATGGTATTTTAAATGATGATGTCCAGCAAGTAGCATTAAAGACCTATTCTCGAAAAAAGTGTTCTCTTTCTTTGGCTGATAAGACCAACTTTAAGACCAATTTTAATGCTGATCATTTGGAGTTTGAATGTACTCATTTAATTGCTGGAAAAAAGGCTTCGGGATCTGCAATAATCAGTGCTGGAAATGGGTTGAATTAGGTCAAGGAATTTAAGGAATCTTCTATTCAAATTCCAGGGGGAAGTGATGTTTTTGTCCGAGGTATTGGTAGTTCCTTCAATCAAAGTATTCATTCCCCGGTGGATTCAGATGATGAGTCTATGGTTAGTGTTAGCAGTGAAGATTCTGATCAATTGTTAGATAAAGAGGATAGTGTGGAACAATTTTCAGAAGACCAAATTGGTGAGTCTTTGAATTCTCTTTTCTCTGAGAAGGTTGATGGTTTAGGTTCTCAAATTATTCATGAATCTTTATTATCACCTTCCCAAATTCCTAACCAATTCTCTTCATAGTTGATATTTGTGGATTTCAGTTGTGCAAAATTTCGCCCCAGTCTTCTAAAGCGGTTGTTTGATTCTTGTTTAATTAATTATGAAGATTGTTTCGTGGAATACCAGGGGTCTCGGTGATAAGTCTAAAAGGGTGTCTTTAAAGAAATTCCTACAGAATATTTGCCCTGATTTAGTACTAATTCAGGAGACTAAATAAGCAACGATCGATTTGAAATTCATTAAATCCTTATGGAGTTCCAAGGAAATCGGCTGGTCGTTTGTGGAAGCTTATGGAAAATCAGGTGGACTTCTTATTATGTGGGATGAAAGTAAATTGTCAGTGCTGGAATTTTTAAAGGGTGGTTATTCTCTTTCAGTCAAATGCCTCACTCTTTGTAAAAAAGTTTGTTGGGTATCAAATGTTTATGGTCCAAATGACTACAAAGAAAGGAGATTCCTTTGGTCTGAATTACGCTCTCTCTCTTATTATTGCACGGATCCTTGGTGTATTGGTGGCGACTTTAATATTACACGATGGGTTCATGAACGATTTCCAGTAGGAAGGCAAACAAAAGGGATGCGTAATTTTAATAAATTCATTGAAGACTCGGGTCTTATGGAAATTCCTTTATCAAATGGTAAATTTACATGGTCTAGGGATGATGAAGCTGCTGTCCGTATAAAAGACTTTAGGCCTATAAGTCTTACCACTTCAGTTTATAAAGTTATTGCTAAAGTCCTTGCTGAAAGAATGAGAAAGGTAATGCCCAACATAATTTCTCAAGCTCAAAGTGCTTTTATTAGTGGCAGACAGATTCTTGATTTAGTTCTCATTGCTAATGAAGTTGTGGAGGAATATCGAGCTAAGAAAAAAAAGGGGTGGATTTTGAAACTAGATCTTGAGAAAGCTTTTGATAGGGTGGATTGGGATTTCCTTGAGTATGTTCTCAGGTTGAAAGGATTTTGTGAAAAATGGATTGAATGGATAAATGGATGTGTTAGGAATCCAAAATTTTCCATTTTCATTAATGGTCGGCCAAGGGGGAGAATTTGTGCTTCTAGAGGTCTTAGGCAAGGAGATCCTCTTTCTCCTTTCCTATTTCTTTTAGTTAGTGAAGTATTGAATGCATTTATCAAAATCATCCATGAGAAGGGCGTTTATGAGGGTTTCATCGTTGGCATGGATAAAGTTCATATTTCCATTCTTCAATTTGCAGATGATACTCTTTTATTTTGTAAGTATGATGATGCTATGCTTGATTCTCTCATTTCTACCATTGGTCTTTTTGAATGGTGCTCTGGGAAGAAAGTTAATTGGGAAAAATCTGCATTGTGTGGAATTAATATCGATAATGACAAGATTCTGGCTCCTTCTTCCCAGTTGAATTGCAAAGTAGAATCTCTTCCATTTTTGTATCTTGGTCTTCCATTAGGTGGTTATCCGAAAAAGGTGTCATTTTGGCAGCCAGTGATTGATAAAATTCATAAAAGGCTTGATAGATGGAGGCGTTTTAATCTATCTAGAGGTGGCCGATTGACTTTATGCAATTCAGTTTTATCAAGCATTCCATTATATTATATGTCCTCGTTTCTCATGCCTTCTAAAGTTGTTTCAAAAGTGGAGCAGTTAATTAGGTCGTTTTTATGGGAAGGAAGTAATGGTTCCAAGTTAAATCACTTGGCTCGTTGGGAGCAAGCTTCAAAACCTCTTTTGAGTGGAGGTCTCGGTATTGGTGGCTTGAAAAACAGAAACCTGTCTCTTCTTGCTAAATAA

mRNA sequence

ATGATTGCACTTTCAATAGAATTCTTTATTTGCAGAATAAATCGAGATGCTCTGGGAACTCTACTGATGGTGAAGGTGGGGTATTTTAAGGAGGCAGCGGACAGGTTTTTGTCTTCAGGAGGAACTCTACCGATGGTGAAGGTGGATATCTATCAAGCATTAGTTCATTCAGAATGTATGCTTAATCCTTTTCATGGACAGTTCCTTTTCATGGACAAAACACTGCTATATTCACGACATTACGTTTTGGAGGGTTCTTATGTTCAGGCTATTTGGAAGTATAAATTATCAGAGAAGGCTAAGGAGTATCTTTGGACTGGCCTTAGAAAATCTTTGAAGTCTCCCTCGCCTCATGCAAAGGGTTTCTTCTCAGCCCGCAAAAACTTCTTCACGAGCGTTTTGCAAAATCACAAGCGTTCTTCTCCGCTGCTTCACAGTTTCTTCTCTGCTGCTTCACAAGGGCTTGTTATCCGACGCTGTCAACTAACCGTTGACCCAAAATCGCAGATTGTCTGCCGAATTTTTATTGTTGCTGCTTTGCTTTCTTTGGGTGGTTCCATCCTCCTTCTCCAATGGAAGTTATCAGCTGTTGTATTCAGAATAGTTGAGATTTTGCAAAATCCTGTTTCTTCCTTCTTTCATGAGAAAATTAAGGAAGAATTTGGAGTCATTAGGTTGATTAAGTTCTTCTCGGATAACGAATGGTTCTTTGAATGTGTTGTTTGGCCTTCCACGGGTGGAAGAAGGATTATTCAAGTTCCAGCAGGCTTGGATAAGAAAGGATGGTATGTTTTTTGGGAAATGATTAGGGATTTCATTCTTAAATTTCATTCTTATGAGAATCAACCTATTCGGTCATTGTCGAGCAAAGAGGAGTGTATTCCAGTTTTTTATAAGGTTTCAGAAGGTCAAGTCTTTCCTAATTCATATGCTGAAGTGGTAAAGCGAGGTGGTTCTTTAATAAGTTCAGTTTCATTGAATGATTCAATAAGAAATGTCAAGGGTGTTAATGAAGAAGCTTACTGGGTTCGCAAGAATTGTGATGTGCTGGAAATAGATTTGGAAAGATCAATTGTTGTTTCTAGATTGATGGTCCATTATTCTTGGAAGGATGTTAAGATTGCCCTTGAGAAATTCTTTAAATCTTCTGTCTTGATTAACCCCTTCATGGATGATAAAGCTTTGATTCATGCAGCAGATGGTGGCTTGGAATTTTCTGCAAATGGCAAGTGGAAGAAATTTGGAAACTTACATTTGAAATTGGAATTTTGGTCCTCTGAAATCCATTCACAGCCGAAGTCTATAAAAAGCTATGGAGGTTGGGTTGCAATTAGAAATCTTCCATTGAATTTATGGCATCGTGACTCCTTTGAAGCGATTGGAAAAAACCTTGGAGGGTTGGAGGCATTTAATGAGGATTTGGTTATTTCAAAGGAGGTCTCGGTACAAGATGAATGTATTAAGTGCAATGGTTGTATTATTCCTTCAACCAAATTGATTAATGATGATAGTTGTTTATTGAATAATGAAGATTTGAATGGGGATTTGGTTCTTTCAAAGGATGCCTCGGTACAAGATGTAGGTATTAATTGCAGTGGTTGCTTTATTCCTTCAACAAAGATGATTAATGATGATAGATGTTTTTTGAATAATGAAGTACAACAGACTTTAATAGAGAGAGGCCAAGTTAATGAGATGTTGGGTTCTCCAAAAGGTGCTTCTTTGCATGACAAGAGTATTAATAATGCTGGTTGTAAAGGTTTTAATGCCAGTATTAATGAGCCGGCTTTAGCTCTCTCTCCTTCATTAAATGTCAATGAATTTAATAAGTACAACCATCAGGAAGCCCAACAGTTTCAGGTCAAGGAATTTAAGGAATCTTCTATTCAAATTCCAGGGGGAAGTGATGTTTTTGTCCGAGGTATTGGTAGTTCCTTCAATCAAAGTATTCATTCCCCGGTGGATTCAGATGATGAGTCTATGGTTAGTGTTAGCAGTGAAGATTCTGATCAATTGTTAGATAAAGAGGATAGTGTGGAACAATTTTCAGAAGACCAAATTGTAGGAAGGCAAACAAAAGGGATGCGTAATTTTAATAAATTCATTGAAGACTCGGGTCTTATGGAAATTCCTTTATCAAATGGTAAATTTACATGGTCTAGGGATGATGAAGCTGCTGTCCGTATAAAAGACTTTAGGCCTATAAGTCTTACCACTTCAGTTTATAAAGTTATTGCTAAAGTCCTTGCTGAAAGAATGAGAAAGGTAATGCCCAACATAATTTCTCAAGCTCAAAGTGCTTTTATTAGTGGCAGACAGATTCTTGATTTAGTTCTCATTGCTAATGAAGTTGTGGAGGAATATCGAGCTAAGAAAAAAAAGGGGTGGATTTTGAAACTAGATCTTGAGAAAGCTTTTGATAGGGTGGATTGGGATTTCCTTGAGTATGTTCTCAGGTTGAAAGGATTTTGTGAAAAATGGATTGAATGGATAAATGGATGTGTTAGGAATCCAAAATTTTCCATTTTCATTAATGGTCGGCCAAGGGGGAGAATTTGTGCTTCTAGAGGTCTTAGGCAAGGAGATCCTCTTTCTCCTTTCCTATTTCTTTTAGTTAGTGAAGTATTGAATGCATTTATCAAAATCATCCATGAGAAGGGCGTTTATGAGGGTTTCATCGTTGGCATGGATAAAGTTCATATTTCCATTCTTCAATTTGCAGATGATACTCTTTTATTTTGTAAGTATGATGATGCTATGCTTGATTCTCTCATTTCTACCATTGGTCTTTTTGAATGGTGCTCTGGGAAGAAAGTTAATTGGGAAAAATCTGCATTGTGTGGAATTAATATCGATAATGACAAGATTCTGGCTCCTTCTTCCCAGTTGAATTGCAAAGTAGAATCTCTTCCATTTTTGTATCTTGGTCTTCCATTAGGTGGTTATCCGAAAAAGGTGTCATTTTGGCAGCCAGTGATTGATAAAATTCATAAAAGGCTTGATAGATGGAGGCGTTTTAATCTATCTAGAGGTGGCCGATTGACTTTATGCAATTCAGTTTTATCAAGCATTCCATTATATTATATGTCCTCGTTTCTCATGCCTTCTAAAGTTGTTTCAAAAGTGGAGCAGTTAATTAGGTCGTTTTTATGGGAAGGAAGTAATGGTTCCAAGTTAAATCACTTGGCTCGTTGGGAGCAAGCTTCAAAACCTCTTTTGAGTGGAGGTCTCGGTATTGGTGGCTTGAAAAACAGAAACCTGTCTCTTCTTGCTAAATAA

Coding sequence (CDS)

ATGATTGCACTTTCAATAGAATTCTTTATTTGCAGAATAAATCGAGATGCTCTGGGAACTCTACTGATGGTGAAGGTGGGGTATTTTAAGGAGGCAGCGGACAGGTTTTTGTCTTCAGGAGGAACTCTACCGATGGTGAAGGTGGATATCTATCAAGCATTAGTTCATTCAGAATGTATGCTTAATCCTTTTCATGGACAGTTCCTTTTCATGGACAAAACACTGCTATATTCACGACATTACGTTTTGGAGGGTTCTTATGTTCAGGCTATTTGGAAGTATAAATTATCAGAGAAGGCTAAGGAGTATCTTTGGACTGGCCTTAGAAAATCTTTGAAGTCTCCCTCGCCTCATGCAAAGGGTTTCTTCTCAGCCCGCAAAAACTTCTTCACGAGCGTTTTGCAAAATCACAAGCGTTCTTCTCCGCTGCTTCACAGTTTCTTCTCTGCTGCTTCACAAGGGCTTGTTATCCGACGCTGTCAACTAACCGTTGACCCAAAATCGCAGATTGTCTGCCGAATTTTTATTGTTGCTGCTTTGCTTTCTTTGGGTGGTTCCATCCTCCTTCTCCAATGGAAGTTATCAGCTGTTGTATTCAGAATAGTTGAGATTTTGCAAAATCCTGTTTCTTCCTTCTTTCATGAGAAAATTAAGGAAGAATTTGGAGTCATTAGGTTGATTAAGTTCTTCTCGGATAACGAATGGTTCTTTGAATGTGTTGTTTGGCCTTCCACGGGTGGAAGAAGGATTATTCAAGTTCCAGCAGGCTTGGATAAGAAAGGATGGTATGTTTTTTGGGAAATGATTAGGGATTTCATTCTTAAATTTCATTCTTATGAGAATCAACCTATTCGGTCATTGTCGAGCAAAGAGGAGTGTATTCCAGTTTTTTATAAGGTTTCAGAAGGTCAAGTCTTTCCTAATTCATATGCTGAAGTGGTAAAGCGAGGTGGTTCTTTAATAAGTTCAGTTTCATTGAATGATTCAATAAGAAATGTCAAGGGTGTTAATGAAGAAGCTTACTGGGTTCGCAAGAATTGTGATGTGCTGGAAATAGATTTGGAAAGATCAATTGTTGTTTCTAGATTGATGGTCCATTATTCTTGGAAGGATGTTAAGATTGCCCTTGAGAAATTCTTTAAATCTTCTGTCTTGATTAACCCCTTCATGGATGATAAAGCTTTGATTCATGCAGCAGATGGTGGCTTGGAATTTTCTGCAAATGGCAAGTGGAAGAAATTTGGAAACTTACATTTGAAATTGGAATTTTGGTCCTCTGAAATCCATTCACAGCCGAAGTCTATAAAAAGCTATGGAGGTTGGGTTGCAATTAGAAATCTTCCATTGAATTTATGGCATCGTGACTCCTTTGAAGCGATTGGAAAAAACCTTGGAGGGTTGGAGGCATTTAATGAGGATTTGGTTATTTCAAAGGAGGTCTCGGTACAAGATGAATGTATTAAGTGCAATGGTTGTATTATTCCTTCAACCAAATTGATTAATGATGATAGTTGTTTATTGAATAATGAAGATTTGAATGGGGATTTGGTTCTTTCAAAGGATGCCTCGGTACAAGATGTAGGTATTAATTGCAGTGGTTGCTTTATTCCTTCAACAAAGATGATTAATGATGATAGATGTTTTTTGAATAATGAAGTACAACAGACTTTAATAGAGAGAGGCCAAGTTAATGAGATGTTGGGTTCTCCAAAAGGTGCTTCTTTGCATGACAAGAGTATTAATAATGCTGGTTGTAAAGGTTTTAATGCCAGTATTAATGAGCCGGCTTTAGCTCTCTCTCCTTCATTAAATGTCAATGAATTTAATAAGTACAACCATCAGGAAGCCCAACAGTTTCAGGTCAAGGAATTTAAGGAATCTTCTATTCAAATTCCAGGGGGAAGTGATGTTTTTGTCCGAGGTATTGGTAGTTCCTTCAATCAAAGTATTCATTCCCCGGTGGATTCAGATGATGAGTCTATGGTTAGTGTTAGCAGTGAAGATTCTGATCAATTGTTAGATAAAGAGGATAGTGTGGAACAATTTTCAGAAGACCAAATTGTAGGAAGGCAAACAAAAGGGATGCGTAATTTTAATAAATTCATTGAAGACTCGGGTCTTATGGAAATTCCTTTATCAAATGGTAAATTTACATGGTCTAGGGATGATGAAGCTGCTGTCCGTATAAAAGACTTTAGGCCTATAAGTCTTACCACTTCAGTTTATAAAGTTATTGCTAAAGTCCTTGCTGAAAGAATGAGAAAGGTAATGCCCAACATAATTTCTCAAGCTCAAAGTGCTTTTATTAGTGGCAGACAGATTCTTGATTTAGTTCTCATTGCTAATGAAGTTGTGGAGGAATATCGAGCTAAGAAAAAAAAGGGGTGGATTTTGAAACTAGATCTTGAGAAAGCTTTTGATAGGGTGGATTGGGATTTCCTTGAGTATGTTCTCAGGTTGAAAGGATTTTGTGAAAAATGGATTGAATGGATAAATGGATGTGTTAGGAATCCAAAATTTTCCATTTTCATTAATGGTCGGCCAAGGGGGAGAATTTGTGCTTCTAGAGGTCTTAGGCAAGGAGATCCTCTTTCTCCTTTCCTATTTCTTTTAGTTAGTGAAGTATTGAATGCATTTATCAAAATCATCCATGAGAAGGGCGTTTATGAGGGTTTCATCGTTGGCATGGATAAAGTTCATATTTCCATTCTTCAATTTGCAGATGATACTCTTTTATTTTGTAAGTATGATGATGCTATGCTTGATTCTCTCATTTCTACCATTGGTCTTTTTGAATGGTGCTCTGGGAAGAAAGTTAATTGGGAAAAATCTGCATTGTGTGGAATTAATATCGATAATGACAAGATTCTGGCTCCTTCTTCCCAGTTGAATTGCAAAGTAGAATCTCTTCCATTTTTGTATCTTGGTCTTCCATTAGGTGGTTATCCGAAAAAGGTGTCATTTTGGCAGCCAGTGATTGATAAAATTCATAAAAGGCTTGATAGATGGAGGCGTTTTAATCTATCTAGAGGTGGCCGATTGACTTTATGCAATTCAGTTTTATCAAGCATTCCATTATATTATATGTCCTCGTTTCTCATGCCTTCTAAAGTTGTTTCAAAAGTGGAGCAGTTAATTAGGTCGTTTTTATGGGAAGGAAGTAATGGTTCCAAGTTAAATCACTTGGCTCGTTGGGAGCAAGCTTCAAAACCTCTTTTGAGTGGAGGTCTCGGTATTGGTGGCTTGAAAAACAGAAACCTGTCTCTTCTTGCTAAATAA

Protein sequence

MIALSIEFFICRINRDALGTLLMVKVGYFKEAADRFLSSGGTLPMVKVDIYQALVHSECMLNPFHGQFLFMDKTLLYSRHYVLEGSYVQAIWKYKLSEKAKEYLWTGLRKSLKSPSPHAKGFFSARKNFFTSVLQNHKRSSPLLHSFFSAASQGLVIRRCQLTVDPKSQIVCRIFIVAALLSLGGSILLLQWKLSAVVFRIVEILQNPVSSFFHEKIKEEFGVIRLIKFFSDNEWFFECVVWPSTGGRRIIQVPAGLDKKGWYVFWEMIRDFILKFHSYENQPIRSLSSKEECIPVFYKVSEGQVFPNSYAEVVKRGGSLISSVSLNDSIRNVKGVNEEAYWVRKNCDVLEIDLERSIVVSRLMVHYSWKDVKIALEKFFKSSVLINPFMDDKALIHAADGGLEFSANGKWKKFGNLHLKLEFWSSEIHSQPKSIKSYGGWVAIRNLPLNLWHRDSFEAIGKNLGGLEAFNEDLVISKEVSVQDECIKCNGCIIPSTKLINDDSCLLNNEDLNGDLVLSKDASVQDVGINCSGCFIPSTKMINDDRCFLNNEVQQTLIERGQVNEMLGSPKGASLHDKSINNAGCKGFNASINEPALALSPSLNVNEFNKYNHQEAQQFQVKEFKESSIQIPGGSDVFVRGIGSSFNQSIHSPVDSDDESMVSVSSEDSDQLLDKEDSVEQFSEDQIVGRQTKGMRNFNKFIEDSGLMEIPLSNGKFTWSRDDEAAVRIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVVEEYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFINGRPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQFADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNCKVESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAK

Homology

[Close]

BLAST of Lag0020188 vs. NCBI nr
Match: XP_038880332.1 (uncharacterized protein LOC120071973 [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 2.8e-106
Identity = 181/279 (64.87%), Postives = 225/279 (80.65%), Query Frame = 0


Query: 814  LEYVLRLKGFCEKWIEWINGCVRNPKFSIFINGRPRGRICASRGLRQGDPLSPFLFLLVS 873
            LE VL+ K F  +WI W+ GCV NPKFSIFI+GRPRGRI  +RG+RQGDP SPFLFLLVS
Sbjct: 4    LEKVLQGKNFDPRWISWMRGCVSNPKFSIFISGRPRGRIKTTRGIRQGDPFSPFLFLLVS 63

Query: 874  EVLNAFIKIIHEKGVYEGFIVGMDKVHISILQFADDTLLFCKYDDAMLDSLISTIGLFEW 933
            EVL+  I  +HEKG YEGF+VG DKVHISI+QF  DTLLFCKY D M+++L  TI +FEW
Sbjct: 64   EVLSGLIARLHEKGKYEGFLVGKDKVHISIIQFVGDTLLFCKYGDEMIENL-RTIEIFEW 123

Query: 934  CSGKKVNWEKSALCGINIDNDKILAPSSQLNCKVESLPFLYLGLPLGGYPKKVSFWQPVI 993
            CS +KVNWEKSA+CGINI+ +K+L+ ++QLNCKV+ LP +YLGLPLGGYPK VSFWQPVI
Sbjct: 124  CSSQKVNWEKSAICGINIEENKMLSVAAQLNCKVKHLPLMYLGLPLGGYPKNVSFWQPVI 183

Query: 994  DKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEG 1053
            DK+  +LD+WRRFNLSRGG+ TLC SV S++P YY+S FL+P KV+  +E+ +++F WEG
Sbjct: 184  DKLQGKLDKWRRFNLSRGGKATLCKSVHSNLPTYYLSLFLLPEKVLGIMERTMKNFFWEG 243

Query: 1054 SNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAK 1093
              G K+NHL +WE  +K    GGLG+GGL+ RNL+ LAK
Sbjct: 244  HKGGKINHLVKWELVTKAQEDGGLGLGGLRARNLAFLAK 281

[Close]

BLAST of Lag0020188 vs. NCBI nr
Match: BBN69274.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 388.7 bits (997), Expect = 1.7e-103
Identity = 195/367 (53.13%), Postives = 253/367 (68.94%), Query Frame = 0


Query: 726  AVRIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVV 785
            +V++ DFRPISL TS+YKVI+KVLA R+R+V+ N ISQ Q AF+  RQILD VL+ANEVV
Sbjct: 261  SVKVTDFRPISLVTSLYKVISKVLASRLREVLGNTISQTQGAFVQKRQILDAVLVANEVV 320

Query: 786  EEYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFIN 845
            EE R + +KG + K+D EKA+D V+W F++ V+  KGF  KW  WI GC+ +  FSI IN
Sbjct: 321  EEVRKQNRKGLVFKIDFEKAYDHVEWKFVDDVMARKGFGVKWRGWIFGCLESANFSIMIN 380

Query: 846  GRPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQ 905
            G+PRG+  ASRGLRQGDPLSPFLF LVS+VL+  I+   +  +  G + G D+V +S LQ
Sbjct: 381  GKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQ 440

Query: 906  FADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNC 965
            FADDT+ F    +    +L+  + LF   SG K+N  KS + GIN   + +   +    C
Sbjct: 441  FADDTIFFLDGKEEYWLNLLQMLKLFCDVSGMKINKAKSCILGINFSIETLNNMAGSWGC 500

Query: 966  KVESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIP 1025
            +V   P +YLGLPLGG P+ ++FW PV+DK+ KRL RW+R  LS+GGRLTL  +VLSSIP
Sbjct: 501  EVGCWPMVYLGLPLGGNPRALNFWNPVLDKVEKRLQRWKRACLSKGGRLTLIQAVLSSIP 560

Query: 1026 LYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNR 1085
             YYMS F MP  V +KVEQL+R+FLWEG    K  HL RW + +K    GGLGIG L+ R
Sbjct: 561  SYYMSLFKMPIGVTAKVEQLMRNFLWEGVEEGKNCHLVRWVRVTKSKEEGGLGIGSLRER 620

Query: 1086 NLSLLAK 1093
            N +L AK
Sbjct: 621  NEALRAK 627

[Close]

BLAST of Lag0020188 vs. NCBI nr
Match: VVA20479.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-103
Identity = 195/367 (53.13%), Postives = 254/367 (69.21%), Query Frame = 0


Query: 726  AVRIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVV 785
            +V++ DFRPISL TS+YKVI+KVLA R+R+V+ N ISQ+Q AF+  RQILD VL+ANEVV
Sbjct: 482  SVKVTDFRPISLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKRQILDAVLVANEVV 541

Query: 786  EEYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFIN 845
            EE R + +KG + K+D EKA+D V+W+F++ VL  KGF  KW  WI GC+ +  FSI IN
Sbjct: 542  EEVRKQNRKGLVFKIDFEKAYDHVEWNFVDDVLARKGFGVKWRGWIFGCLESANFSIMIN 601

Query: 846  GRPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQ 905
            G+PRG+  ASRGLRQGDPLSPFLF LVS+VL+  I+   +  +  G + G D+V +S LQ
Sbjct: 602  GKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSPLQ 661

Query: 906  FADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNC 965
            FADDT+ F    +    +L+  + LF   SG K+N  KS + GIN   + +   +    C
Sbjct: 662  FADDTIFFLDGKEEYWLNLLQMLKLFCDVSGMKINKAKSCILGINFSIEALNNMAGSWGC 721

Query: 966  KVESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIP 1025
            +V   P +YLGLPLGG P+ ++FW PV+DK+ KRL +W+R  LS+GGRLTL  +VLSSIP
Sbjct: 722  EVGCWPMVYLGLPLGGNPRALNFWNPVLDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIP 781

Query: 1026 LYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNR 1085
             YYMS F MP  V  KVEQL+R+FLWEG    K  HL RW + +K    GGLGIG L+ R
Sbjct: 782  SYYMSLFKMPIGVTVKVEQLMRNFLWEGVEEGKNCHLVRWVRVTKSKEEGGLGIGSLRER 841

Query: 1086 NLSLLAK 1093
            N +L AK
Sbjct: 842  NEALRAK 848

[Close]

BLAST of Lag0020188 vs. NCBI nr
Match: CAN70431.1 (hypothetical protein VITISV_030910 [Vitis vinifera])

HSP 1 Score: 384.8 bits (987), Expect = 2.5e-102
Identity = 186/367 (50.68%), Postives = 254/367 (69.21%), Query Frame = 0


Query: 726  AVRIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVV 785
            +V+I D+RPISL TS+YK+IAKVL+ R+RKV+   IS +Q AF+ GR ILD VLIANEVV
Sbjct: 163  SVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHILDAVLIANEVV 222

Query: 786  EEYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFIN 845
            +E R   ++G + K+D EKA+D VDW FL++VL+ KGF +KW  WI GC+ +  F+I +N
Sbjct: 223  DEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCLYSSSFAILVN 282

Query: 846  GRPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQ 905
            G  +G + ASRGLRQGDPLSPFLF LV++VL+  +    E G+ EGF VG D+  +S+LQ
Sbjct: 283  GNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVSLLQ 342

Query: 906  FADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNC 965
            FADDT+ F K     L +L   + +F   SG K+N EKS + GIN   + + + +S  +C
Sbjct: 343  FADDTIFFSKASMEHLQNLKIILLVFXQVSGLKINLEKSTISGINTRQELLSSLASVFDC 402

Query: 966  KVESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIP 1025
            +V   P  YLGLPLGG PK + FW PV+++I +RLD W++  LS GGR+TL  S LS IP
Sbjct: 403  RVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQSCLSHIP 462

Query: 1026 LYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNR 1085
             Y++S F +P+ V SK+E++ R+FLW G+   K +HL RWE  S+P   GGLG G +  R
Sbjct: 463  SYFLSLFKIPASVASKIEKMQRNFLWSGAGEGKKDHLVRWEVVSRPKELGGLGFGKISLR 522

Query: 1086 NLSLLAK 1093
            N++LL K
Sbjct: 523  NIALLGK 529

[Close]

BLAST of Lag0020188 vs. NCBI nr
Match: RVW64408.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-102
Identity = 185/367 (50.41%), Postives = 254/367 (69.21%), Query Frame = 0


Query: 726  AVRIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVV 785
            +V+I D+RPISL TS+YK+IAKVL+ R+RKV+   IS +Q AF+ GR ILD VLIANEVV
Sbjct: 1241 SVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHILDAVLIANEVV 1300

Query: 786  EEYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFIN 845
            +E R   ++G + K+D EKA+D VDW FL++VL+ KGF +KW  WI GC+ +  F+I +N
Sbjct: 1301 DEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCLSSSSFAILVN 1360

Query: 846  GRPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQ 905
            G  +G + ASRGLRQGDPLSPFLF LV++VL+  +    E G+ EGF VG D+  +S+LQ
Sbjct: 1361 GNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVSLLQ 1420

Query: 906  FADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNC 965
            FADDT+ F K     L +L   + +F   SG K+N EKS + GIN   + + + +S  +C
Sbjct: 1421 FADDTIFFSKASMEHLQNLKIILLVFGQVSGLKINLEKSTISGINTRQELLSSLASVFDC 1480

Query: 966  KVESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIP 1025
            +V   P  YLGLPLGG PK + FW PV+++I +RLD W++  LS GGR+TL  S LS IP
Sbjct: 1481 RVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQSCLSHIP 1540

Query: 1026 LYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNR 1085
             Y++S F +P+ + SK+E++ R+FLW G+   K +HL RWE  S+P   GGLG G +  R
Sbjct: 1541 SYFLSLFKIPASIASKIEKMQRNFLWSGAGEGKKDHLVRWEVVSRPKELGGLGFGKISLR 1600

Query: 1086 NLSLLAK 1093
            N++LL K
Sbjct: 1601 NIALLGK 1607

[Close]

BLAST of Lag0020188 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.9e-26
Identity = 96/356 (26.97%), Postives = 173/356 (48.60%), Query Frame = 0


Query: 729  IKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVVEEY 788
            IK++RP+SL ++ YK++AK ++ R++ V+  +I   QS  + GR I D V +  +++   
Sbjct: 522  IKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHFA 581

Query: 789  RAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFINGRP 848
            R        L LD EKAFDRVD  +L   L+   F  +++ ++     + +  + IN   
Sbjct: 582  RRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWSL 641

Query: 849  RGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQFAD 908
               +   RG+RQG PLS  L+ L  E    F+ ++ ++    G ++    + + +  +AD
Sbjct: 642  TAPLAFGRGVRQGCPLSGQLYSLAIE---PFLCLLRKR--LTGLVLKEPDMRVVLSAYAD 701

Query: 909  DTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKI-LAPSSQLNCKV 968
            D +L  + D   L+       ++   S  ++NW KS+  G+   + K+   P +  +   
Sbjct: 702  DVILVAQ-DLVDLERAQECQEVYAAASSARINWSKSS--GLLEGSLKVDFLPPAFRDISW 761

Query: 969  ESLPFLYLGLPLGG--YPKKVSFWQPVIDKIHKRLDRWRRFN--LSRGGRLTLCNSVLSS 1028
            ES    YLG+ L    YP   +F + + + +  RL +W+ F   LS  GR  + N +++S
Sbjct: 762  ESKIIKYLGVYLSAEEYPVSQNFIE-LEECVLTRLGKWKGFAKVLSMRGRALVINQLVAS 821

Query: 1029 IPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGI 1080
               Y +       + ++K+++ +  FLW G       H      +S PL  GG G+
Sbjct: 822  QIWYRLICLSPTQEFIAKIQRRLLDFLWIG------KHWVSAGVSSLPLKEGGQGV 862

[Close]

BLAST of Lag0020188 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.7e-26
Identity = 88/327 (26.91%), Postives = 156/327 (47.71%), Query Frame = 0


Query: 730  KDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQ-ILDLVLIANEVVEEY 789
            ++FRPISL     K++ K+LA R+++ +  +I   Q  FI G Q   ++    N +    
Sbjct: 528  ENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHIN 587

Query: 790  RAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFINGRP 849
            RAK K   I+ +D EKAFD++   F+   L   G    +++ I      P  +I +NG+ 
Sbjct: 588  RAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQK 647

Query: 850  RGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQFAD 909
                    G RQG PLSP LF +V EVL    + I ++   +G  +G ++V +S+  FAD
Sbjct: 648  LEAFPLKTGTRQGCPLSPLLFNIVLEVL---ARAIRQEKEIKGIQLGKEEVKLSL--FAD 707

Query: 910  DTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNCKVE 969
            D +++ +       +L+  I  F   SG K+N +KS     N +         +L   + 
Sbjct: 708  DMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIA 767

Query: 970  SLPFLYLGLPLGGYPKKV--SFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIPL 1029
            S    YLG+ L    K +    ++P++ +I +  ++W+    S  GR+ +    +    +
Sbjct: 768  SKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVI 827

Query: 1030 YYMSS--FLMPSKVVSKVEQLIRSFLW 1052
            Y  ++    +P    +++E+    F+W
Sbjct: 828  YRFNAIPIKLPMTFFTELEKTTLKFIW 849

[Close]

BLAST of Lag0020188 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 8.2e-24
Identity = 99/363 (27.27%), Postives = 170/363 (46.83%), Query Frame = 0


Query: 728  RIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQ-ILDLVLIANEVVE 787
            +I++FRPISL     K++ K+LA R+++ +  II   Q  FI G Q   ++    N +  
Sbjct: 533  KIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHY 592

Query: 788  EYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFING 847
              + K K   I+ LD EKAFD++   F+  VL   G    ++  I      P  +I +NG
Sbjct: 593  INKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNG 652

Query: 848  RPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQF 907
                 I    G RQG PLSP+LF +V EVL    + I ++   +G  +G ++V IS+L  
Sbjct: 653  EKLEAIPLKSGTRQGCPLSPYLFNIVLEVL---ARAIRQQKEIKGIQIGKEEVKISLL-- 712

Query: 908  ADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSA--LCGINIDNDKILAPSSQLN 967
            ADD +++          L++ I  F    G K+N  KS   L   N   +K +  ++  +
Sbjct: 713  ADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPFS 772

Query: 968  CKVESLPFLYLGLPLGGYPKKV--SFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLS 1027
                ++   YLG+ L    K +    ++ +  +I + L RW+    S  GR+ +    + 
Sbjct: 773  IVTNNIK--YLGVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMAIL 832

Query: 1028 SIPLYYMSS--FLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIG 1084
               +Y  ++    +P++  +++E  I  F+W          L + ++      SGG+ + 
Sbjct: 833  PKAIYRFNAIPIKIPTQFFNELEGAICKFVWNNKKPRIAKSLLKDKRT-----SGGITMP 883

[Close]

BLAST of Lag0020188 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-22
Identity = 95/370 (25.68%), Postives = 163/370 (44.05%), Query Frame = 0


Query: 728  RIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQ-ILDLVLIANEVVE 787
            R +++RPISL     K++ K+L  R+++ +  II   Q  FI G Q   ++    N +  
Sbjct: 525  RKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQH 584

Query: 788  EYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFING 847
              + K K   IL +D EKAFD +   F+   L+  G    +++ I      P  +I +NG
Sbjct: 585  INKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNG 644

Query: 848  RPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQF 907
                      G RQG PLSP LF +V EVL   I+   E+   +G  +G +++ +S+  F
Sbjct: 645  VKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIR---EEKAIKGIHIGSEEIKLSL--F 704

Query: 908  ADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNCK 967
            ADD +++ +        L+  I  +   SG K+N  KS       +N         +   
Sbjct: 705  ADDMIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNNNQAEKTVKDSIPFT 764

Query: 968  VESLPFLYLGLPLGGYPKKV--SFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSI 1027
            V      YLG+ L    K +    ++ +  +I + +++W+    S  GR+ +    +   
Sbjct: 765  VVPKKMKYLGVYLTKDVKDLYKENYETLRKEIAEDVNKWKNIPCSWLGRINIVKMSILPK 824

Query: 1028 PLYYMSSFLM--PSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGL 1087
             +Y  ++  +  P      +E++I  F+W            +  Q +K LLS     GG+
Sbjct: 825  AIYNFNAIPIKAPLSYFKDLEKIILHFIWN----------QKKPQIAKTLLSNKNKAGGI 879

Query: 1088 KNRNLSLLAK 1093
               +L L  K
Sbjct: 885  TLPDLRLYYK 879

[Close]

BLAST of Lag0020188 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-16
Identity = 38/101 (37.62%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 992  VIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLW 1051
            +++++  R+  WR   LS  GRLTL  +VLSS+P++ MS+ L+P  ++++++QL R+FLW
Sbjct: 16   ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLW 75

Query: 1052 EGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAK 1093
              +   K  HL +W +   P   GGLG+   K+ N +L++K
Sbjct: 76   GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISK 116

[Close]

BLAST of Lag0020188 vs. ExPASy TrEMBL
Match: A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.4e-106
Identity = 194/365 (53.15%), Postives = 257/365 (70.41%), Query Frame = 0


Query: 728  RIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVVEE 787
            ++KDFRPISL TSVYK+IAK LA R+R V+   IS+ QSAF+ GRQILD VL+ANE VE+
Sbjct: 508  KVKDFRPISLITSVYKIIAKTLATRLRGVLGETISETQSAFVEGRQILDSVLLANEAVED 567

Query: 788  YRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFINGR 847
            YR++ KKG++LK+D EKA+DRVDW FL+ VLR KGF E+W +WI GCV +  FSIF+NGR
Sbjct: 568  YRSRGKKGFVLKIDFEKAYDRVDWGFLDLVLRKKGFGERWRKWIRGCVSSTSFSIFVNGR 627

Query: 848  PRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQFA 907
             RG+   SRGLRQGDPLSPFLF LV++VL   +    E   + GF +G D + +S LQFA
Sbjct: 628  VRGKFHGSRGLRQGDPLSPFLFTLVADVLGRMVDKAVETEAFSGFQIGKDNIRLSHLQFA 687

Query: 908  DDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNCKV 967
            DDTL F K +D+ L  L+  +  F   SG KVN  KS L GI + ++ +   ++ + C+V
Sbjct: 688  DDTLFFVKDEDS-LQKLVKIVEAFCGISGLKVNLNKSQLLGICLSDEAVAQGANLIGCEV 747

Query: 968  ESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIPLY 1027
               P  YLG+PLGG P+K +FW+PV+DK  KR+D W+   LSRGGRLTL  SVLSS+P+Y
Sbjct: 748  GKWPMTYLGMPLGGSPRKKTFWEPVLDKCAKRMDGWKCSFLSRGGRLTLIQSVLSSLPIY 807

Query: 1028 YMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNL 1087
            Y+S F +P  V+ ++E+++R F WEG + +  +HL  W++  KP   GGL IG L+ RN 
Sbjct: 808  YLSLFKVPKMVLKELEKMMRDFFWEGGDLAGGDHLVAWDEVCKPRAEGGLAIGRLEMRNK 867

Query: 1088 SLLAK 1093
             LL K
Sbjct: 868  GLLMK 871

[Close]

BLAST of Lag0020188 vs. ExPASy TrEMBL
Match: M5WKV4 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015607mg PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.6e-105
Identity = 196/367 (53.41%), Postives = 256/367 (69.75%), Query Frame = 0


Query: 726  AVRIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVV 785
            +V++ D+RPISL TS+YKVI+KVLA R+R+V+ N ISQ+Q AF+  RQILD VL+ANEVV
Sbjct: 248  SVKVTDYRPISLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKRQILDAVLVANEVV 307

Query: 786  EEYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFIN 845
            EE R +K+KG + K+D EKA+D V+W+F++ VL  KGF  KW  WI GC+ +  FSI IN
Sbjct: 308  EEVRKQKRKGLVFKIDFEKAYDHVEWNFVDDVLARKGFGAKWRGWIIGCLESVNFSIMIN 367

Query: 846  GRPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQ 905
            G+PRG+  ASRGLRQGDPLSPFLF LVS+VL+  I+   +  +  G + G D+V +S LQ
Sbjct: 368  GKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQ 427

Query: 906  FADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNC 965
            FADDT+      +    +L+  + LF   SG K+N  KS + GIN   D +   +    C
Sbjct: 428  FADDTIFLLDGKEEYWLNLLQLLKLFCEVSGMKINKAKSCILGINFSTDALNNMAGSWGC 487

Query: 966  KVESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIP 1025
            +V   P +YLGLPLGG P+ ++FW PV+DK+ KRL +W+R  LS+GGRLTL  +VLSSIP
Sbjct: 488  EVGCWPMVYLGLPLGGNPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIP 547

Query: 1026 LYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNR 1085
             YYMS F MP  V +KVEQL+R+FLWEG    K  HL RWE+ +K    GGLGIG L+ R
Sbjct: 548  SYYMSLFKMPIGVAAKVEQLMRNFLWEGLEDGKNCHLVRWERVTKSKEEGGLGIGSLRER 607

Query: 1086 NLSLLAK 1093
            N +L AK
Sbjct: 608  NEALRAK 614

[Close]

BLAST of Lag0020188 vs. ExPASy TrEMBL
Match: A0A803QI00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.4e-105
Identity = 194/365 (53.15%), Postives = 253/365 (69.32%), Query Frame = 0


Query: 728  RIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVVEE 787
            ++KDFRPISL TSVYK++AK LA R+R V+   IS+ QSAF+ GRQILD VLIANE VE+
Sbjct: 1407 KVKDFRPISLITSVYKIVAKTLATRLRGVLGETISETQSAFVEGRQILDSVLIANETVED 1466

Query: 788  YRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFINGR 847
            +R++ KKG++ K+DLEKA+DRVDWDFL+ VL+ KGF E W +WI GCV +  FS+ INGR
Sbjct: 1467 FRSRGKKGFVFKIDLEKAYDRVDWDFLDLVLKEKGFGEVWRKWIRGCVSSTSFSLLINGR 1526

Query: 848  PRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQFA 907
             RG+   SRGLRQGDPLSPFLF LV +VL   +    +   + GF VG D + IS LQFA
Sbjct: 1527 VRGKFRGSRGLRQGDPLSPFLFTLVVDVLGRLVDKAAQSDTFSGFQVGKDNIQISHLQFA 1586

Query: 908  DDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNCKV 967
            DDTL F K D+A L  L+  +  F   SG KVN  KS L GI+++ + +   +  + C+V
Sbjct: 1587 DDTLFFVK-DEASLRKLVEIVEAFCGISGLKVNLNKSQLLGISLEEEVVAQNAEIIGCEV 1646

Query: 968  ESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIPLY 1027
             + P  YLG+PLGG P+K +FW+PV+DK  KRLD W+   LSRGGRL L  SVLSS+P+Y
Sbjct: 1647 GTWPMTYLGMPLGGSPRKGTFWEPVLDKCAKRLDGWKCSFLSRGGRLILIQSVLSSLPIY 1706

Query: 1028 YMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNL 1087
            Y+S F  P  V+  +E+++R F WEG + +  +HL  W++  KP   GGL IG L+ RN 
Sbjct: 1707 YLSLFKAPKMVLQAIEKMMRDFFWEGGDLAGGDHLVAWDEVCKPRSEGGLAIGRLEMRNK 1766

Query: 1088 SLLAK 1093
             LL K
Sbjct: 1767 GLLMK 1770

[Close]

BLAST of Lag0020188 vs. ExPASy TrEMBL
Match: M5XHS0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa020085mg PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-104
Identity = 195/367 (53.13%), Postives = 255/367 (69.48%), Query Frame = 0


Query: 726  AVRIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVV 785
            +V++ D+RPISL TS+YKVI+KVL  R+R+V+ N ISQ+Q AF+  RQILD VL+ANEVV
Sbjct: 484  SVKVTDYRPISLVTSLYKVISKVLVSRLREVLGNTISQSQGAFVQKRQILDAVLVANEVV 543

Query: 786  EEYRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFIN 845
            EE R +K+KG + K+D EKA+D V+W+F++ VL  KGF  KW  WI GC+ +  FSI IN
Sbjct: 544  EEVRKQKRKGLVFKIDFEKAYDHVEWNFVDDVLVRKGFGAKWRGWIIGCLESVNFSIMIN 603

Query: 846  GRPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQ 905
            G+PRG+  ASRGLRQGDPLSPFLF LVS+VL+  I+   +  +  G + G D+V +S LQ
Sbjct: 604  GKPRGKFRASRGLRQGDPLSPFLFTLVSDVLSRIIERAQDVNLVHGIVSGHDQVEVSHLQ 663

Query: 906  FADDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNC 965
            FADDT+      +    +L+  + LF   SG K+N  KS + GIN   D +   +    C
Sbjct: 664  FADDTIFLLDGKEEYWLNLLQLLKLFCEVSGMKINKAKSCILGINFSTDALNNMAGSWGC 723

Query: 966  KVESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIP 1025
            +V   P +YLGLPLGG P+ ++FW PV+DK+ KRL +W+R  LS+GGRLTL  +VLSSIP
Sbjct: 724  EVGCWPMVYLGLPLGGNPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIP 783

Query: 1026 LYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNR 1085
             YYMS F MP  V +KVEQL+R+FLWEG    K  HL RWE+ +K    GGLGIG L+ R
Sbjct: 784  SYYMSLFKMPIGVAAKVEQLMRNFLWEGLEDGKNCHLVRWERVTKSKEEGGLGIGSLRER 843

Query: 1086 NLSLLAK 1093
            N +L AK
Sbjct: 844  NEALRAK 850

[Close]

BLAST of Lag0020188 vs. ExPASy TrEMBL
Match: A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 6.4e-104
Identity = 192/365 (52.60%), Postives = 251/365 (68.77%), Query Frame = 0


Query: 728  RIKDFRPISLTTSVYKVIAKVLAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVVEE 787
            ++KD+RPISL TSVYK+IAK LA R+R V+   IS+ QSAF+ GRQILD VL+ANE VE+
Sbjct: 1431 KVKDYRPISLITSVYKIIAKTLATRLRGVLGETISETQSAFVEGRQILDSVLMANEAVED 1490

Query: 788  YRAKKKKGWILKLDLEKAFDRVDWDFLEYVLRLKGFCEKWIEWINGCVRNPKFSIFINGR 847
            YR++ KKG +LK+D EKA+DRVDW FL+ V+R KGF E+W +WI GCV    FSIFINGR
Sbjct: 1491 YRSRGKKGIVLKIDFEKAYDRVDWGFLDLVMRKKGFGERWTKWIRGCVSTTSFSIFINGR 1550

Query: 848  PRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISILQFA 907
             RG+   SRGLRQ DPLSPFLF L+++VL   +    +     GF +G D + +S LQFA
Sbjct: 1551 VRGKFNGSRGLRQVDPLSPFLFTLIADVLGRMVDKAIDTESLSGFQIGKDDIQLSHLQFA 1610

Query: 908  DDTLLFCKYDDAMLDSLISTIGLFEWCSGKKVNWEKSALCGINIDNDKILAPSSQLNCKV 967
            DDTL F K D+A L  L+  +  F   SG KVN  KS L G+ +D D +   + Q+ C+V
Sbjct: 1611 DDTLFFVK-DEASLQKLVKIVEAFCGISGLKVNLNKSQLLGVCMDEDAVAQSAIQIGCEV 1670

Query: 968  ESLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIPLY 1027
               P  YLG+PLGG P+K SFW+PV+DK   R+D W+   LSRGGRLTL  SVLSS+P+Y
Sbjct: 1671 GRWPMTYLGMPLGGSPRKRSFWEPVLDKCATRMDGWKCSFLSRGGRLTLIQSVLSSLPIY 1730

Query: 1028 YMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNL 1087
            ++S F  P  V+ ++E+++R F WEG + +  +HL  W++  KP   GGL IG L+ RN 
Sbjct: 1731 FLSLFKAPKVVLKELEKMMRDFFWEGGDLAGGDHLVAWDEVCKPRAEGGLAIGRLEMRNK 1790

Query: 1088 SLLAK 1093
             LL K
Sbjct: 1791 GLLMK 1794

[Close]

BLAST of Lag0020188 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 84.7 bits (208), Expect = 4.9e-16
Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 969  SLPFLYLGLPLGGYPKKVSFWQPVIDKIHKRLDRWRRFNLSRGGRLTLCNSVLSSIPLYY 1028
            +LP  YLGLPL       S + P+++KI  R+ +W   +LS  GRL L +SV+ S+  ++
Sbjct: 22   ALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFW 81

Query: 1029 MSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRN 1087
            MS+F +PS  + +++ +  SFLW G   +       W     P   GGLGI  LK  N
Sbjct: 82   MSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEAN 139

[Close]

BLAST of Lag0020188 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 75.1 bits (183), Expect = 3.9e-13
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 749 LAERMRKVMPNIISQAQSAFISGRQILDLVLIANEVVEEYRAKK-KKGW-ILKLDLEKAF 808
           + ER++ +M N+I  AQ++FI GR   D ++   E V   R KK  KGW +LKLDLEKA+
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60

Query: 809 DRVDWDFLEYVLRLKGFCEKWI 829
           DR+ WD+LE  L   GF E W+
Sbjct: 61  DRIRWDYLEDTLISAGFPEVWL 82

[Close]

BLAST of Lag0020188 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-11
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 844 INGRPRGRICASRGLRQGDPLSPFLFLLVSEVLNAFIKIIHEKGVYEGFIVGMDKVHISI 903
           ING P+G +  SRGLRQGDPLSP+LF+L +EVL+   +   E+G   G  V  +   I+ 
Sbjct: 14  INGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRINH 73

Query: 904 LQFADDT 911
           L FADDT
Sbjct: 74  LLFADDT 80

The following BLAST results are available for this feature:

BLAST of Lag0020188 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880332.1	2.8e-106	64.87	uncharacterized protein LOC120071973 [Benincasa hispida]	[more]
BBN69274.1	1.7e-103	53.13	TatD related DNase [Prunus dulcis]	[more]
VVA20479.1	2.2e-103	53.13	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
CAN70431.1	2.5e-102	50.68	hypothetical protein VITISV_030910 [Vitis vinifera]	[more]
RVW64408.1	3.2e-102	50.41	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]

BLAST of Lag0020188 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	3.9e-26	26.97	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
O00370	8.7e-26	26.91	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P11369	8.2e-24	27.27	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
P08548	1.5e-22	25.68	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
P0C2F6	2.8e-16	37.62	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lag0020188 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803P8A0	1.4e-106	53.15	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
M5WKV4	2.6e-105	53.41	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A803QI00	4.4e-105	53.15	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
M5XHS0	1.3e-104	53.13	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A803QQM3	6.4e-104	52.60	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lag0020188 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24255.1	4.9e-16	36.44	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G20520.1	3.9e-13	47.56	RNA binding;RNA-directed DNA polymerases	[more]
ATMG01250.1	2.8e-11	50.75	RNA-directed DNA polymerase (reverse transcriptase)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 413..469 e-value: 4.4E-8 score: 32.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 730..978 e-value: 2.4E-42 score: 145.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 691..979 score: 13.754379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 649..676
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 649..668
None	No IPR available	PANTHER	PTHR33116:SF33	OS01G0885550 PROTEIN	coord: 676..1092
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 676..1092
None	No IPR available	CDD	cd01650	RT_nLTR_like	coord: 728..979 e-value: 1.56355E-52 score: 181.72
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 728..950

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0020188.1	Lag0020188.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0003824	catalytic activity