Lag0020168 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0020168
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr5: 48533892 .. 48535409 (-)
RNA-Seq ExpressionLag0020168
SyntenyLag0020168
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACCATTCTTTTTTGGCATTCAGATTCAGACGGAGTCAGACACACTCAAAAGAGCATTTAGAGTCCAAAGGCCTTCAGACTCAGAAGCATTCAAGTTCAGTCAGAGAATCCAGAAGAGTCAGAAGCCAAAGAGTCCAGAGAATTCAGAGGAATTTGAGATTCATAATTCAAAAGATTCAAGACTGAAAAGATTTGAAGACAGAAGACTTCAAAAAGAGATCAACAAGTCAATCGACCGATCAAAAAGATCACTAAGTCAGCAGGTCGATCATCTAAGAGGATCAACAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAAAGAACATCAAGCCAGTAGGTCGATCATCCAGGAAGATCAACAAGCTAACAAGCCGATCTAAGATATCATCAAGCTAACAAGCCGATCTAAGATATCATCAAGCTAACAAGTCGATCTTCACCAAGTCAACAGGTCAATCATTCAAGAGGATCAACAAACTAATAAGTCGATTCAACAGATCATCAAGCCAACAAGCCGATCCAAGAGATCATCAAGCTAGCAGGTCGATCATCTAGGGAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGCTAGCAGGCCGATTATCCAAGAAGATCAACAAGCCAACAAGTCGATCCAAGAGATCATCAAGCCAATAGGCTGATCCAAGAGATCATCAAGCTAGCAGACAGATCATTCAGGAAGATCAACAAGCCAACAAGCTGATCCTAGAGATCATCAACCTAGTAGGCCGACCATCCAAGAAGATCAACAAACCGATCCAAGAAAATCAACAAGTTAGAGACCAAAGTTTTTATATATTTGTGAGGGAGAATCAGATGATTAACATTAAAGATTATACATCCACACACATACAAATATAAATACAAATATATTTTTTATTCACGTGTCTCCATCTTCGAAGTTACGTGTGAACAAATTGGCACGCCTAGTGGGACCATCTCTACCTCTCTTCTCTCTCCCTTATCTCAAAACACAAATGTAAACATGTCGTTCAAGATTTTCTCAATGGTTGTTGTCATGAACAAGTCTTACATGCTTGCTACAATCAAAGAAAGGAGCAAGCATCAAATAGAGGAGACCACCATTCATTTTTAGCTTTCAGATTCAGATGGAGTCAAACACACTCGAAAGAGCATTCAGAGTCCAGAGGCATTCAGACTCAGAAGCATTCAAGTTCAGTCAGAGAATCCAGAAGAGTCAGAAGTCAAAGAGTCCAGAGAATTCAGAGAAATTTGAGGTTTAGAATTCAAAAGATTCAAGACTCAAAAGATTTGAAGACTAGAAGAGATCAACAAGCCAATCGACCGATCAAAAAGATCACCAAGTCAGTAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAAAGAACATCAAGCCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCTAA

mRNA sequence

ATGTCACCATTCTTTTTTGGCATTCAGATTCAGACGGAGTCAGACACACTCAAAAGAGCATTTAGAGTCCAAAGGCCTTCAGACTCAGAAGCATTCAAGTTCAGTCAGAGAATCCAGAAGAGTCAGAAGCCAAAGAGTCCAGAGAATTCAGAGGAATTTGAGATTCATAATTCAAAAGATTCAAGACTGAAAAGATTTGAAGACAGAAGACTTCAAAAAGAGATCAACAAGTCAATCGACCGATCAAAAAGATCACTAAGTCAGCAGACAGATCATTCAGGAAGATCAACAAGCCAACAAGCTGATCCTAGAGATCATCAACCTAGTAGGCCGACCATCCAAGAAGATCAACAAACCGATCCAAGAAAATCAACAATCTTACATGCTTGCTACAATCAAAGAAAGGAGCAAGCATCAAATAGAGGAGACCACCATTCATTTTTAGCTTTCAGATTCAGATGGAGTCAAACACACTCGAAAGAGCATTCAGAGTCCAGAGGCATTCAGACTCAGAAGCATTCAAGTTCAGTCAGAGAATCCAGAAGAGTCAGAAGTCAAAGAGTCCAGAGAATTCAGAGAAATTTGAGGTTTAGAATTCAAAAGATTCAAGACTCAAAAGATTTGAAGACTAGAAGAGATCAACAAGCCAATCGACCGATCAAAAAGATCACCAAGTCAGTAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAAAGAACATCAAGCCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCTAA

Coding sequence (CDS)

ATGTCACCATTCTTTTTTGGCATTCAGATTCAGACGGAGTCAGACACACTCAAAAGAGCATTTAGAGTCCAAAGGCCTTCAGACTCAGAAGCATTCAAGTTCAGTCAGAGAATCCAGAAGAGTCAGAAGCCAAAGAGTCCAGAGAATTCAGAGGAATTTGAGATTCATAATTCAAAAGATTCAAGACTGAAAAGATTTGAAGACAGAAGACTTCAAAAAGAGATCAACAAGTCAATCGACCGATCAAAAAGATCACTAAGTCAGCAGACAGATCATTCAGGAAGATCAACAAGCCAACAAGCTGATCCTAGAGATCATCAACCTAGTAGGCCGACCATCCAAGAAGATCAACAAACCGATCCAAGAAAATCAACAATCTTACATGCTTGCTACAATCAAAGAAAGGAGCAAGCATCAAATAGAGGAGACCACCATTCATTTTTAGCTTTCAGATTCAGATGGAGTCAAACACACTCGAAAGAGCATTCAGAGTCCAGAGGCATTCAGACTCAGAAGCATTCAAGTTCAGTCAGAGAATCCAGAAGAGTCAGAAGTCAAAGAGTCCAGAGAATTCAGAGAAATTTGAGGTTTAGAATTCAAAAGATTCAAGACTCAAAAGATTTGAAGACTAGAAGAGATCAACAAGCCAATCGACCGATCAAAAAGATCACCAAGTCAGTAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAAAGAACATCAAGCCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCGATCTAA

Protein sequence

MSPFFFGIQIQTESDTLKRAFRVQRPSDSEAFKFSQRIQKSQKPKSPENSEEFEIHNSKDSRLKRFEDRRLQKEINKSIDRSKRSLSQQTDHSGRSTSQQADPRDHQPSRPTIQEDQQTDPRKSTILHACYNQRKEQASNRGDHHSFLAFRFRWSQTHSKEHSESRGIQTQKHSSSVRESRRVRSQRVQRIQRNLRFRIQKIQDSKDLKTRRDQQANRPIKKITKSVGRSSKRINKLTSRSNRSSSQQADPKEHQASRPIIQEDQQANKPI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0020168.1Lag0020168.1mRNA