Lag0020165 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0020165
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Description60S acidic ribosomal protein P1
Locationchr5: 48518683 .. 48524387 (+)
RNA-Seq ExpressionLag0020165
SyntenyLag0020165
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTAAGTTAGAAAACGGAAGTAGGAGGGCTAGAGAGCAAGAGAGAGAGTCGAGAATAAAGTTCGGGTCCACTTCTTCAGTGGCGAAGAAGGATATAATATCTGTTCATGCTCCTAGGGTTTTTAGAAGTTCGGAGGCGTTTCGGGACAAACCAGGCGGAACCGGGACGACCAGAGGCAGTAGGGACCAAACGGAGCTGGACGAGCTCGGTCTCGGCCCATGGCCGAGGCCTAGCAAGGGGTCGGTCTTGGCCCGTCCCACTTGCCGGTTTCGCCTCTTGGGTCCATCTCCCAGCTCGATTTCTCCCCGGTTGTCCTCGTCAGCTCCTTGTACATCGGGTGGTCCAAAATTGCCTATAACAAATCACTCACTTTATTATTAGGGTGACACGATTTTTTTTCCTGTTATCCCCCGTCATTTTTTATCTTTCATTATGTTATTGTTTATTTGAGTTTGAGTTTGTTTAGTATGTCATTCAAAATTTGATTACTTTTCTTACAAATTCATCGAATCAAATAAATTCAGTCAATATATATATATAATTTAGATTGAAAACCTTTTTTAAAAAAATTATGATCCAAATAATTTCTATATATAAAAAGACATTGAAAAACAATTGGATTTTGACTAAATTTCTTATTTTCAAATTTATGTAATTAAATCGGAAACCAAACACACCTTTTGTCTTTTTATCATGTACTGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTGCGACAATAAAAAGTGTTCCATCTCCCAAAAATTACAATTTTTTTCATTAAGTTAAGTTATGCAATCATATTCAATGGTACGCTAAGGTATCCAAAAACAAGAACGTGTCCTCTCTAGTTAGTTGGAACATGGCTCTGAATAAGACACCAGTTATAATCTCAAATACGGGTGGTTCAATCACACATCGTGCAACTATTGAAGTAAAAAAAATAATGTATTCTCTCTGTGTATTAATATTTACATCATTCGAATGTATCAAAAATCAATTTAAAACATCGAATAAAGTTTGGAACAACTTTTTAAATTGGTAAAAAGTGTTTTTAGACTATCAAAACGCTTTTAAAGATTTTATACCATTTCATTAGATATTCAAAAGTAGTTTTTGAAAAATCTAAAAAGCCTAATATGCATTTTAAGAATTTTTTTCCGCCACAAAAATAAATAGTTGCTAACCTGATACCTTCCGGTTTGAGAGTGATTTTAATGTGGTTTTGATTATGAGAGAATATTTTTTGAATCTTTAAAAATAATTAAATTGTTCCTAAGGAAACCATTTAATTAGTGTTCTTTTAAGTAAAATACACTTTTGGTTATTGAAATTTAAACTTAGTTCTTGTTGATTTGGAGTTTTAACAACGGACACTTTTGGTCATTGATATTTGAGTTTACTTTCTAGTTAGTCTAGCTTCTGCATTTCAAAAGTGACTGTTTGGTTATTGAGATTTTAATTTGATTTTTATTTAGTTCTTAAAGTTTGAAATTAATTTATAAATAGTCTTTGGGTAGGGTTAGTAACAAGTTGACTAGATTTTGTTCATATGTTATTACGTCATTTTAAAATGATTTGGAATTGTTTTCATTTTCTATTTCTATACTTGAAACAAATTCAAAATAAATTTCAAACATCAGCACCAATTAAAAATTAAATTTAAGTCTTCAAGAGTAAACATGACATTCTTGAAAAGCTTAAGAAGGATCTAGAAACTAAATCAAATCTTAAAGACACAAAAAATATTAGTCGGATAAAATCGAGAGACAAAATAAAAACTAAGTTTAAATTTTAGAGACAAAATATATTTAGCCAACGTTCTTAAATTTCATTCCAAACTTACCCTAAAGTTTTTTTTAGTACAACATTGAGATGCAAGTGACAAATTATAATTATGATTCTTCAAAAACTCGTTGACAAGTGTTACTTTCATTAAAGTGATTTATTCAGTGGAAAAAAAATCAATTTAATCCTAAACTGTGGAAAAAAAATCAATTTAATCCTAAACTTAACAGGTTGTATCAATTATAACAATTAACTTTCAATTTCATCAAATTGAACCCCAAACTTGATAGATTGTATAAATTTGAACCATAAACTTGCATATCCGTTGCAATGTATACCTTTGGCTTTGGTTAACTTCTCATTTGAATTGCCATCAAAGTATGTAATTGACAATTTCCTTTTGATTGTTTAATTCTCATTGCATATGAGTTGGTTTCTTGGAAGAAATTCGTTGGAGAAACTTTTTATTTGAAGAAATCAAATATTATAGATGGATTCTTATCATTGTTATTACCTTGCTCTAAAAAAACATCACAATATTATCAGCAGTAAAAAAAAAAAAAAGAAAATCCAACAAATATGAAAAATAGAAATTCAAAATTTCTTTACTTATGTTTCCTACGTTTGAACGTTTTTCTAATTAGCAGAAAAAAATAATAGTAAAAGAAGGGAAAAAAAACCCTAAAATAGAAGAAAAAAAAAACCCTAAAATTCTTAACAACAAGAAAAAACCAGCAAACATTTCAAGAAAAAAACTCTAAAATTACTTTTTTTTTTCATAATCGTTGATAGCAGCTAAAATGAAAAAGAAAAAAAAAAAAAACAATAAAGAACCCTCCAGAATTGCTTTTCTATCATCCCACAATTGCATGTTATCTAAGTAGCTAAATAAAGATAACAAAATCCACAAACACATCAACAAAAAAAAAAAAAAAAAAAAGAAATTCATGTAAACTTTTTAGCTGCAAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAATAAAAAGTTTCAAGAAACCAATTTAGGTGAATTTGGATTAAGAAAAAAAAAAAAGAAGTCAATTATGTGTGTTTTTTTTTTTTTAGGAAAGTCAATTATGTGCTTTAACGATACAATACTTATTGTTAAGTATTTTTATTTTATTTATTTTTTTTAAAAAAACACTTATTGCTAAGTATGAAGTTAAAATTGGTACAATATAAATTTTGGATTAAAATTGATACTACCTCCTAAGTTTAGGGTTAAAAATGATTTTTTTTAATATTTATTTAAACTAAAGTTATAGAATAATGGAAGTTATTGGCGTCTATGCATAATTAATTTAATTATTATTTTTGTTTAAAGTTTAGATGGTATCTGATTAGTGGACCCTCTAATCTGACTTTTTCATACGATTGAGGAGATTGATGTGGATGGAGGGCGAAGATTCCGTGAGGACTGAGGTGCCATTGGTTTAGGCATTAGCAATGCCGGTTGCTGCATCCGTTACTTTCAACAATTCTCTTCCCTCTAAATTATTTTATTCTAAGTAATTAAAAAAGAAAAAGAAAAAAAGCATGGCATTCTCAGCCCTCAATATTTTATTATTGTGCTTGTTCAGAATAATTATAACAATTCAGACCCTATTATAAAGATGGAATAAAAATAAAAGAGTGGAAAAAAGAAAAAAAAAAAAAAAAGAAAAGGAAGGGGAAGTGGATATGGATAAGGTCGGATCGGAAGAGTAGTTGCTTGGCTTGGCTTGGCTTTGTGTGTTTCGATTTCCCAGTTTCCAACGCAAATGCAAAGGCAAGGCGCAAAGGGAAGGGGTCTGGTCAGGCATAGGCAGTGGCAGTGGCAGTGGCAGTGGCTGTGGCTGTGGGTGCGCCTCCAGTCCAGTTTTGCTCAAAATGGTTAAGCAGAAAAAGAAAGAGCCTTTGTAGAGACTGATATTTCCACAACAATCACAGCTGCCATTTTCTGGACCACTCCCATCATCATATTCATAGCCTACTGGAAAAAAGATTCCACTCCCCCCTTACCCTTTATTAATTACTCCCATTAATACATTATTACTTGCTATATCATAGTTTTGCCCCTTACATTACATTATCGAAAGACCCTTTTACAGCACATATGATCATATCATCCTGGTTCTACATGTTTTTATCATCAAATCAAGAATCTTGCTTTTAAAAAGGGTTATTTTAGTAAAAAGAATTGTGCAGTGTGTTGTGTTGTGTGTTTATCTTTAATAACCCAAGCAAGGCACAGTGGGAGGTTGGTTTGTGTTTGTGGTAGAGAGAATCCAAAAGCTTATGTTTAAGTTTATATTCTCCTATTTGGACCCTTTTACCCGTCAGTTTCCTTTTCCAAGATAACGTTAGATAAGCGAATAAGTTCCTAAATATACCAATTGCCCATTTTTGTACATCAAATCAAAAGTAACCATTTTTATCATCCGTCACTGTTACAAACAAATCTGTAAATATTTAATGGTAGAAGGGCCATAAAAGACAATTTCTCTTTCTCTTTCTCTAACTAGAATGGCCCAATAGATTTCCGTTGGTCCACTCAAGCCCAACTCAGATGAACCCGGTCCGATACCGATACCGATACCGAGGGACCGTGAAAAACCCTAATTCCCCCGAGCACAATATATAGCGCACTCAGAGCCGTGGCGCGATCACTGTACGCGCATTTGACTCCAAGCAGCCTCTCGGTATGTCGCTCCTCCAAGATCTTCATCTATCAATCTTGCACTCTCTCTCCGTTGTTTTCGACTGCCTTCTGAATTCTGATTGTTTAATTCATAGGTATTCATTGCATATCAGGCTCTACGCTAACCATGTCGACCAGTGAGCTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATTGCCATCACTGTACGAGTGGTTTTCTTTCTGTGTGTTATCTTTTTTCTTCTTGGACTGGTTGACTCATGATTAATCTGGGTATTGGATCTAGGCGGAGAAGATTGCATCCGTAGTAGCAGCTGCAGGGCTCTGTGTGGAATCTTACTGGCCCAGCCTTTTTGCAAAGTTGGCGGAAAAGAGAGATATTGGGGACCTTCTTCTGAACGTTGGCTGTGGTGGTGGCGCTGCGGCTCCCGTGTCTGTAGCTGCTCCCGCCGGTGGTGCTGCCGCTCCTGCTGCCGCTCCTGCCGTTGAGGAAAAGAAGGTATGCTGATGAATGTTTATTTCTTGTCTTTATTATAATTTAGCTATAGCTTTGATAGAATTCTTTCGTAATAATACAATGTGCGGATTCCTGGATCTTCCAACGTTAAGATATCTCCACGTTATAAAAGATCCAATAATTTTATAGGGAAATTTTCGTAGTTGCCCTTATAAACCCCGCCTATCAATATTAATCTTGCAATTAGATGTGCTGCTCTACTTTGCTAGCACTAACCAATATGTTTACTCTCGATTTTCAAGAAGGGTCTCTTTCATAAATACCCTACCTACGTTTTGTATGTTGCTAATACTAATACGGGTTAGTCATGAGCACCTAATTGGTTAATTATGAAAAATGAAAAATTCATGCTACAGTTTACTTTTTCACAATTAACCCATTAGGTGTTCATCATTATCCCTTAGAAATTGTATTAGCAACGTATAGAATGTGGGTTAGGTGTATATATGAAAGCGATTTAACAAGAACCTTAATACTGATAAGCATAATTTGTACTTAGAAATTTTAGTAGCCACCTCTATTGACAATGGTAGTCACTCAGAATCAATCTTATTTGTTTCAAATTTAGTCTCCTTCGCCTGTTTTCTCCCCTTCCTGCGATTTGTTGTTCATTTAAGTGTATTGTGCAGGAGGAGCCAAAGGATGAGAGCGACGACGACTTGGGATTCAGCTTATTCGATTAG

mRNA sequence

ATGCTTAAGTTAGAAAACGGAAGTAGGAGGGCTAGAGAGCAAGAGAGAGAGTCGAGAATAAAGTTCGGGTCCACTTCTTCAGTGGCGAAGAAGGATATAATATCTGTTCATGCTCCTAGGGTTTTTAGAAGTTCGGAGGCGTTTCGGGACAAACCAGGCGGAACCGGGACGACCAGAGGCAGTAGGGACCAAACGGAGCTGGACGAGCTCGGTCTCGGCCCATGGCCGAGGCCTAGCAAGGGGTCGGTCTTGGCCCGTCCCACTTGCCGGTTTCGCCTCTTGGGTCCATCTCCCAGCTCGATTTCTCCCCGGTTGTCCTCTTTCCAACGCAAATGCAAAGGCAAGGCGCAAAGGGAAGGGGTCTGGTCAGGCATAGGCAGTGGCAGTGGCAGTGGCAGTGGCTGTGGCTGTGGGTGCGCCTCCAGTCCAGTTTTGCTCAAAATGCGCACTCAGAGCCGTGGCGCGATCACTGTACGCGCATTTGACTCCAAGCAGCCTCTCGGTATTCATTGCATATCAGGCTCTACGCTAACCATGTCGACCAGTGAGCTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATTGCCATCACTGCGGAGAAGATTGCATCCGTAGTAGCAGCTGCAGGGCTCTGTGTGGAATCTTACTGGCCCAGCCTTTTTGCAAAGTTGGCGGAAAAGAGAGATATTGGGGACCTTCTTCTGAACGTTGGCTGTGGTGGTGGCGCTGCGGCTCCCGTGTCTGTAGCTGCTCCCGCCGGTGGTGCTGCCGCTCCTGCTGCCGCTCCTGCCGTTGAGGAAAAGAAGGAGGAGCCAAAGGATGAGAGCGACGACGACTTGGGATTCAGCTTATTCGATTAG

Coding sequence (CDS)

ATGCTTAAGTTAGAAAACGGAAGTAGGAGGGCTAGAGAGCAAGAGAGAGAGTCGAGAATAAAGTTCGGGTCCACTTCTTCAGTGGCGAAGAAGGATATAATATCTGTTCATGCTCCTAGGGTTTTTAGAAGTTCGGAGGCGTTTCGGGACAAACCAGGCGGAACCGGGACGACCAGAGGCAGTAGGGACCAAACGGAGCTGGACGAGCTCGGTCTCGGCCCATGGCCGAGGCCTAGCAAGGGGTCGGTCTTGGCCCGTCCCACTTGCCGGTTTCGCCTCTTGGGTCCATCTCCCAGCTCGATTTCTCCCCGGTTGTCCTCTTTCCAACGCAAATGCAAAGGCAAGGCGCAAAGGGAAGGGGTCTGGTCAGGCATAGGCAGTGGCAGTGGCAGTGGCAGTGGCTGTGGCTGTGGGTGCGCCTCCAGTCCAGTTTTGCTCAAAATGCGCACTCAGAGCCGTGGCGCGATCACTGTACGCGCATTTGACTCCAAGCAGCCTCTCGGTATTCATTGCATATCAGGCTCTACGCTAACCATGTCGACCAGTGAGCTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGACGATGGAATTGCCATCACTGCGGAGAAGATTGCATCCGTAGTAGCAGCTGCAGGGCTCTGTGTGGAATCTTACTGGCCCAGCCTTTTTGCAAAGTTGGCGGAAAAGAGAGATATTGGGGACCTTCTTCTGAACGTTGGCTGTGGTGGTGGCGCTGCGGCTCCCGTGTCTGTAGCTGCTCCCGCCGGTGGTGCTGCCGCTCCTGCTGCCGCTCCTGCCGTTGAGGAAAAGAAGGAGGAGCCAAAGGATGAGAGCGACGACGACTTGGGATTCAGCTTATTCGATTAG

Protein sequence

MLKLENGSRRAREQERESRIKFGSTSSVAKKDIISVHAPRVFRSSEAFRDKPGGTGTTRGSRDQTELDELGLGPWPRPSKGSVLARPTCRFRLLGPSPSSISPRLSSFQRKCKGKAQREGVWSGIGSGSGSGSGCGCGCASSPVLLKMRTQSRGAITVRAFDSKQPLGIHCISGSTLTMSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD
Homology
[Close]
BLAST of Lag0020165 vs. NCBI nr
Match: XP_023551718.1 (60S acidic ribosomal protein P1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 2.0e-51
Identity = 115/136 (84.56%), Postives = 126/136 (92.65%), Query Frame = 0 

Query: 154 GAITVRAFDSKQPLGIHCISGSTLTMSTSELACAYAALALHDDGIAITAEKIASVVAAAG 213
           G+IT+ AF SK   G HC+  +TLTMS+SELACAYAALAL+DDGIAITA+KIA+VVAAAG
Sbjct: 2   GSITLHAFPSKCYPGPHCMPDATLTMSSSELACAYAALALYDDGIAITADKIAAVVAAAG 61

Query: 214 LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKE 273
           LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAA AGGA+A AAAPAVEEKKE
Sbjct: 62  LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASAGGASASAAAPAVEEKKE 121

Query: 274 EPKDESDDDLGFSLFD 290
           EPK+ESDDD+GFSLFD
Sbjct: 122 EPKEESDDDMGFSLFD 137

[Close]
BLAST of Lag0020165 vs. NCBI nr
Match: XP_022984373.1 (60S acidic ribosomal protein P1 [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 3.8e-50
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 155 AIT-VRAFDSKQPLGIHCISGSTLTMSTSELACAYAALALHDDGIAITAEKIASVVAAAG 214
           AIT + AF SK   G HCI  +TLTMS SELACAYAALAL+DDGIAITA+KIA+VVAAAG
Sbjct: 2   AITLLHAFPSKYCPGPHCIPDATLTMSRSELACAYAALALYDDGIAITADKIAAVVAAAG 61

Query: 215 LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKE 274
           LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAA AGGA+A AAAPAVEEKKE
Sbjct: 62  LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASAGGASASAAAPAVEEKKE 121

Query: 275 EPKDESDDDLGFSLFD 290
           EPK+ESDDD+GFSLFD
Sbjct: 122 EPKEESDDDMGFSLFD 137

[Close]
BLAST of Lag0020165 vs. NCBI nr
Match: KAG6574265.1 (60S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.7 bits (522), Expect = 5.4e-49
Identity = 111/120 (92.50%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 170 HCISGSTLTMSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAE 229
           HCIS +TLTMSTSELACAYAALALHDDGIAITA+KIA+VVAAAGLCVESYWPSLFAKLAE
Sbjct: 14  HCISSATLTMSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAE 73

Query: 230 KRDIGDLLLNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 289
           KRDIGDLLLNVGCGGGAAA VSVAAPAGGAA+ AAAPAVEEKKEEPK+ESDDD+GFSLFD
Sbjct: 74  KRDIGDLLLNVGCGGGAAAAVSVAAPAGGAAS-AAAPAVEEKKEEPKEESDDDMGFSLFD 132

[Close]
BLAST of Lag0020165 vs. NCBI nr
Match: XP_022140845.1 (60S acidic ribosomal protein P1-like [Momordica charantia])

HSP 1 Score: 194.9 bits (494), Expect = 9.6e-46
Identity = 104/111 (93.69%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 179 MSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 238
           MSTSELACAYAA+AL+DDGIAITAEKIA+VVAAAGLCVESYWPSLFAKLAEKR+IGDLLL
Sbjct: 1   MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 239 NVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           NVGCGGGAAAPVSVAAPAGGAAA AAAPAVEEKKEEPK+ESDDD+GFSLFD
Sbjct: 61  NVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEESDDDMGFSLFD 111

[Close]
BLAST of Lag0020165 vs. NCBI nr
Match: XP_022945965.1 (60S acidic ribosomal protein P1-like [Cucurbita moschata] >XP_023541270.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo] >KAG7013333.1 60S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-44
Identity = 104/111 (93.69%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 179 MSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 238
           MSTSELACAYAALALHDDGIAITA+KIA+VVAAAGLCVESYWPSLFAKLAEKRDIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 60

Query: 239 NVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           NVGCGGGAAA VSVAAPAGGAA+ AAAPAVEEKKEEPK+ESDDD+GFSLFD
Sbjct: 61  NVGCGGGAAAAVSVAAPAGGAAS-AAAPAVEEKKEEPKEESDDDMGFSLFD 110

[Close]
BLAST of Lag0020165 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34
Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 0 

Query: 179 MSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 238
           M++ ELAC YAAL L DDGIAITAEKIA++V AA + VESYWP+LFAKL EKR++ DL+L
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 239 NVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           +VG GGG AAPV+ AAPAGGAAA AAAPAVEEKKEE K+ESDDD+GFSLFD
Sbjct: 61  SVGSGGG-AAPVAAAAPAGGAAA-AAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]
BLAST of Lag0020165 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 4.1e-31
Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 0 

Query: 179 MST-SELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLL 238
           MST  ELAC+YA + L D+GIAITA+KIA++V AAG+ +ESYWP LFAK+AEKR++ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 239 LNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEE-KKEEPKDESDDDLGFSLFD 290
           +NVG GGG  APV+ AAPA G  A AAAPA EE KK+EP +ESD DLGF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of Lag0020165 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-30
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 179 MST-SELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLL 238
           MST  ELAC+YA + L D+GIAITA+KIA++V AAG+ +ESYWP LFAK+AEKR++ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 239 LNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           +NVG GGG  APV+ AAPA G  A AA  A E+KK+EP +ESD DLGF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of Lag0020165 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 7.7e-30
Identity = 74/113 (65.49%), Postives = 90/113 (79.65%), Query Frame = 0 

Query: 179 MST-SELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLL 238
           MST  ELAC+YA + L D+GIAIT++KIA++V AAG+ +ESYWP LFAK+AEKR++ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 239 LNVGC-GGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           +NVG  GGG  APVS AAPA    A AAAPA EEKK+EP +ESD DLGF LFD
Sbjct: 61  MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of Lag0020165 vs. ExPASy Swiss-Prot
Match: Q9HGV0 (60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G06830 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 71/112 (63.39%), Postives = 84/112 (75.00%), Query Frame = 0 

Query: 179 MSTSELACAYAALALHDDGIAITAEKIASVVAAAGLC-VESYWPSLFAKLAEKRDIGDLL 238
           MST+ELAC+YAAL L DDG+ ITA+KI +++ AA +  VE  W SLFAK  E +DI DLL
Sbjct: 1   MSTAELACSYAALILADDGVEITADKIQTLLGAAKVADVEPIWTSLFAKALEGKDIKDLL 60

Query: 239 LNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
            NVG  GGAAAP +V   A GAAAPA A A EEKKEE K+ESD+D+GF LFD
Sbjct: 61  TNVG-SGGAAAPAAVGGAAAGAAAPAEAAAAEEKKEEEKEESDEDMGFGLFD 111

[Close]
BLAST of Lag0020165 vs. ExPASy TrEMBL
Match: A0A6J1JAB2 (60S acidic ribosomal protein P1 OS=Cucurbita maxima OX=3661 GN=LOC111482693 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 116/136 (85.29%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 155 AIT-VRAFDSKQPLGIHCISGSTLTMSTSELACAYAALALHDDGIAITAEKIASVVAAAG 214
           AIT + AF SK   G HCI  +TLTMS SELACAYAALAL+DDGIAITA+KIA+VVAAAG
Sbjct: 2   AITLLHAFPSKYCPGPHCIPDATLTMSRSELACAYAALALYDDGIAITADKIAAVVAAAG 61

Query: 215 LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKE 274
           LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAA AGGA+A AAAPAVEEKKE
Sbjct: 62  LCVESYWPSLFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASAGGASASAAAPAVEEKKE 121

Query: 275 EPKDESDDDLGFSLFD 290
           EPK+ESDDD+GFSLFD
Sbjct: 122 EPKEESDDDMGFSLFD 137

[Close]
BLAST of Lag0020165 vs. ExPASy TrEMBL
Match: A0A6J1CGB2 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111011416 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.7e-46
Identity = 104/111 (93.69%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 179 MSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 238
           MSTSELACAYAA+AL+DDGIAITAEKIA+VVAAAGLCVESYWPSLFAKLAEKR+IGDLLL
Sbjct: 1   MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 239 NVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           NVGCGGGAAAPVSVAAPAGGAAA AAAPAVEEKKEEPK+ESDDD+GFSLFD
Sbjct: 61  NVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKKEEPKEESDDDMGFSLFD 111

[Close]
BLAST of Lag0020165 vs. ExPASy TrEMBL
Match: A0A6J1G2H4 (60S acidic ribosomal protein P1-like OS=Cucurbita moschata OX=3662 GN=LOC111450051 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 8.8e-45
Identity = 104/111 (93.69%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 179 MSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 238
           MSTSELACAYAALALHDDGIAITA+KIA+VVAAAGLCVESYWPSLFAKLAEKRDIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 60

Query: 239 NVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           NVGCGGGAAA VSVAAPAGGAA+ AAAPAVEEKKEEPK+ESDDD+GFSLFD
Sbjct: 61  NVGCGGGAAAAVSVAAPAGGAAS-AAAPAVEEKKEEPKEESDDDMGFSLFD 110

[Close]
BLAST of Lag0020165 vs. ExPASy TrEMBL
Match: A0A6J1E4K8 (60S acidic ribosomal protein P1 OS=Cucurbita moschata OX=3662 GN=LOC111430567 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.4e-44
Identity = 101/111 (90.99%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 179 MSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 238
           MS+SELACAYAALAL+DDGIAITA+KIA+VVAAAGLCVESYWPSLFAKLAEKRDIGDLLL
Sbjct: 1   MSSSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 60

Query: 239 NVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           NVGCGGGAAAPVSVAA A GA+A AAAPAVEEKKEEPK+ESDDD+GFSLFD
Sbjct: 61  NVGCGGGAAAPVSVAASASGASASAAAPAVEEKKEEPKEESDDDMGFSLFD 111

[Close]
BLAST of Lag0020165 vs. ExPASy TrEMBL
Match: A0A6J1HYH2 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111467766 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.4e-44
Identity = 102/111 (91.89%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 179 MSTSELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 238
           MSTSEL CAYAALALHDDGIAITA+KIA+VVAAAGLCVESYWPSLFAKLAEKRDIGDLLL
Sbjct: 1   MSTSELVCAYAALALHDDGIAITADKIAAVVAAAGLCVESYWPSLFAKLAEKRDIGDLLL 60

Query: 239 NVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           NVGCGGGAAA VSVAAPAGGAA+ AAAPAVEEK+EEPK+ESDDD+GFSLFD
Sbjct: 61  NVGCGGGAAAAVSVAAPAGGAAS-AAAPAVEEKEEEPKEESDDDMGFSLFD 110

[Close]
BLAST of Lag0020165 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 136.7 bits (343), Expect = 2.9e-32
Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 0 

Query: 179 MST-SELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLL 238
           MST  ELAC+YA + L D+GIAITA+KIA++V AAG+ +ESYWP LFAK+AEKR++ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 239 LNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEE-KKEEPKDESDDDLGFSLFD 290
           +NVG GGG  APV+ AAPA G  A AAAPA EE KK+EP +ESD DLGF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of Lag0020165 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 136.7 bits (343), Expect = 2.9e-32
Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 0 

Query: 179 MST-SELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLL 238
           MST  ELAC+YA + L D+GIAITA+KIA++V AAG+ +ESYWP LFAK+AEKR++ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 239 LNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEE-KKEEPKDESDDDLGFSLFD 290
           +NVG GGG  APV+ AAPA G  A AAAPA EE KK+EP +ESD DLGF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of Lag0020165 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-31
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 179 MST-SELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLL 238
           MST  ELAC+YA + L D+GIAITA+KIA++V AAG+ +ESYWP LFAK+AEKR++ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 239 LNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           +NVG GGG  APV+ AAPA G  A AA  A E+KK+EP +ESD DLGF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of Lag0020165 vs. TAIR 10
Match: AT1G01100.2 (60S acidic ribosomal protein family )

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-31
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 179 MST-SELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLL 238
           MST  ELAC+YA + L D+GIAITA+KIA++V AAG+ +ESYWP LFAK+AEKR++ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 239 LNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           +NVG GGG  APV+ AAPA G  A AA  A E+KK+EP +ESD DLGF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of Lag0020165 vs. TAIR 10
Match: AT1G01100.4 (60S acidic ribosomal protein family )

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-31
Identity = 72/112 (64.29%), Postives = 89/112 (79.46%), Query Frame = 0 

Query: 179 MST-SELACAYAALALHDDGIAITAEKIASVVAAAGLCVESYWPSLFAKLAEKRDIGDLL 238
           MST  ELAC+YA + L D+GIAITA+KIA++V AAG+ +ESYWP LFAK+AEKR++ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 239 LNVGCGGGAAAPVSVAAPAGGAAAPAAAPAVEEKKEEPKDESDDDLGFSLFD 290
           +NVG GGG  APV+ AAPA G  A AA  A E+KK+EP +ESD DLGF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

The following BLAST results are available for this feature:
BLAST of Lag0020165 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023551718.12.0e-5184.5660S acidic ribosomal protein P1 [Cucurbita pepo subsp. pepo][more]
XP_022984373.13.8e-5085.2960S acidic ribosomal protein P1 [Cucurbita maxima][more]
KAG6574265.15.4e-4992.5060S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022140845.19.6e-4693.6960S acidic ribosomal protein P1-like [Momordica charantia][more]
XP_022945965.11.8e-4493.6960S acidic ribosomal protein P1-like [Cucurbita moschata] >XP_023541270.1 60S ac... [more]
BLAST of Lag0020165 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P528551.4e-3475.6860S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1[more]
Q8LEQ04.1e-3166.3760S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ... [more]
Q8LCW92.6e-3064.2960S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ... [more]
O230957.7e-3065.4960S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ... [more]
Q9HGV01.1e-2563.3960S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / ... [more]
BLAST of Lag0020165 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JAB21.8e-5085.2960S acidic ribosomal protein P1 OS=Cucurbita maxima OX=3661 GN=LOC111482693 PE=3... [more]
A0A6J1CGB24.7e-4693.6960S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A6J1G2H48.8e-4593.6960S acidic ribosomal protein P1-like OS=Cucurbita moschata OX=3662 GN=LOC1114500... [more]
A0A6J1E4K84.4e-4490.9960S acidic ribosomal protein P1 OS=Cucurbita moschata OX=3662 GN=LOC111430567 PE... [more]
A0A6J1HYH27.4e-4491.8960S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111467766... [more]
BLAST of Lag0020165 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47700.12.9e-3266.3760S acidic ribosomal protein family [more]
AT5G47700.22.9e-3266.3760S acidic ribosomal protein family [more]
AT1G01100.11.9e-3164.2960S acidic ribosomal protein family [more]
AT1G01100.21.9e-3164.2960S acidic ribosomal protein family [more]
AT1G01100.41.9e-3164.2960S acidic ribosomal protein family [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 179..241
e-value: 2.6E-28
score: 99.6
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 200..288
e-value: 1.7E-21
score: 76.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR45696:SF2260S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATEDcoord: 179..289
NoneNo IPR availablePANTHERPTHR4569660S ACIDIC RIBOSOMAL PROTEIN P1coord: 179..289
NoneNo IPR availableCDDcd05831Ribosomal_P1coord: 194..288
e-value: 8.39479E-22
score: 85.8363
IPR027534Ribosomal protein L12/P1/P2 familyHAMAPMF_01478Ribosomal_L12_archcoord: 184..289
score: 14.103479

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0020165.1Lag0020165.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032147 activation of protein kinase activity
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006414 translational elongation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0030295 protein kinase activator activity
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0003735 structural constituent of ribosome