Lag0020159 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0020159
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionsmall G protein signaling modulator 1-like isoform X2
Locationchr5: 48491235 .. 48491639 (-)
RNA-Seq ExpressionLag0020159
SyntenyLag0020159
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACTTGACGGAGTAATCCACTTCCGAGTGTTTTCTTCTTCTTCTTCTTCGTCTTCTTCTCTCTCCACCTTTCTGCATCTAGAGAGAGACAAAGAGGTATAAAGAAAAGGAGCTTGCTCTCCTTCCCTTCTCGTAACTGGTAAAACCCAACCCCATAGTTTAGATTCACTTTCCGACGTCGAACCAAGTTCTAAGGATAAGGCATTGCGGCCCGAGCTCCCGATCTGTATCTTCTTCCCCTCTATGATCGCCTCCGGCACCGACATCGCCCCCTCCTTCGGCGTCGGCGGCGGCTTCGTCTCCCGGATGATGGCGGGGGCACGCCCGAATGCAGCCGTCGCCTTCACGGCCTTGGCGGGCCTCGCTGTGGTCGTCGTTCTCTTCTACTCTGCCAGTAGGTAA

mRNA sequence

ATGAGACTTGACGGAGTAATCCACTTCCGAGTGTTTTCTTCTTCTTCTTCTTCGTCTTCTTCTCTCTCCACCTTTCTGCATCTAGAGAGAGACAAAGAGGATAAGGCATTGCGGCCCGAGCTCCCGATCTGTATCTTCTTCCCCTCTATGATCGCCTCCGGCACCGACATCGCCCCCTCCTTCGGCGTCGGCGGCGGCTTCGTCTCCCGGATGATGGCGGGGGCACGCCCGAATGCAGCCGTCGCCTTCACGGCCTTGGCGGGCCTCGCTGTGGTCGTCGTTCTCTTCTACTCTGCCAGTAGGTAA

Coding sequence (CDS)

ATGAGACTTGACGGAGTAATCCACTTCCGAGTGTTTTCTTCTTCTTCTTCTTCGTCTTCTTCTCTCTCCACCTTTCTGCATCTAGAGAGAGACAAAGAGGATAAGGCATTGCGGCCCGAGCTCCCGATCTGTATCTTCTTCCCCTCTATGATCGCCTCCGGCACCGACATCGCCCCCTCCTTCGGCGTCGGCGGCGGCTTCGTCTCCCGGATGATGGCGGGGGCACGCCCGAATGCAGCCGTCGCCTTCACGGCCTTGGCGGGCCTCGCTGTGGTCGTCGTTCTCTTCTACTCTGCCAGTAGGTAA

Protein sequence

MRLDGVIHFRVFSSSSSSSSSLSTFLHLERDKEDKALRPELPICIFFPSMIASGTDIAPSFGVGGGFVSRMMAGARPNAAVAFTALAGLAVVVVLFYSASR
Homology
[Close]
BLAST of Lag0020159 vs. NCBI nr
Match: XP_023541558.1 (small G protein signaling modulator 2-like isoform X4 [Cucurbita pepo subsp. pepo] >XP_023541559.1 small G protein signaling modulator 2-like isoform X5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-15
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 50  MIASGTDIAPSFGVGGGFVSRMMAGARPNAAVAFTALAGLAVVVVLFYSASR 102
           MIASGTDIA SFGVGGGFVSRMMAGARPNAAVA TALAGLAVVVVLFYSASR
Sbjct: 1   MIASGTDIARSFGVGGGFVSRMMAGARPNAAVAVTALAGLAVVVVLFYSASR 52

[Close]
BLAST of Lag0020159 vs. NCBI nr
Match: KAG6574260.1 (hypothetical protein SDJN03_28147, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-15
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 50  MIASGTDIAPSFGVGGGFVSRMMAGARPNAAVAFTALAGLAVVVVLFYSASR 102
           MIASGTDIA SFGVGGGFVSRMMAGARPNAAVA TALAGLAVVVVLFYSASR
Sbjct: 1   MIASGTDIARSFGVGGGFVSRMMAGARPNAAVAVTALAGLAVVVVLFYSASR 52

[Close]
BLAST of Lag0020159 vs. NCBI nr
Match: XP_022968471.1 (small G protein signaling modulator 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-15
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 50  MIASGTDIAPSFGVGGGFVSRMMAGARPNAAVAFTALAGLAVVVVLFYSASR 102
           MIASGTDIA SFGVGGGFVSRMMAGARPNAAVA TALAGLAVVVVLFYSASR
Sbjct: 1   MIASGTDIARSFGVGGGFVSRMMAGARPNAAVAVTALAGLAVVVVLFYSASR 52

[Close]
BLAST of Lag0020159 vs. NCBI nr
Match: XP_022945147.1 (small G protein signaling modulator 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-15
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 50  MIASGTDIAPSFGVGGGFVSRMMAGARPNAAVAFTALAGLAVVVVLFYSASR 102
           MIASGTDIA SFGVGGGFVSRMMAGARPNAAVA TALAGLAVVVVLFYSASR
Sbjct: 1   MIASGTDIARSFGVGGGFVSRMMAGARPNAAVAVTALAGLAVVVVLFYSASR 52

[Close]
BLAST of Lag0020159 vs. NCBI nr
Match: XP_022945150.1 (small G protein signaling modulator 2-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-15
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 0 

Query: 50  MIASGTDIAPSFGVGGGFVSRMMAGARPNAAVAFTALAGLAVVVVLFYSASR 102
           MIASGTDIA SFGVGGGFVSRMMAGARPNAAVA TALAGLAVVVVLFYSASR
Sbjct: 1   MIASGTDIARSFGVGGGFVSRMMAGARPNAAVAVTALAGLAVVVVLFYSASR 52

The following BLAST results are available for this feature:
BLAST of Lag0020159 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023541558.18.9e-1596.15small G protein signaling modulator 2-like isoform X4 [Cucurbita pepo subsp. pep... [more]
KAG6574260.18.9e-1596.15hypothetical protein SDJN03_28147, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022968471.18.9e-1596.15small G protein signaling modulator 1-like isoform X2 [Cucurbita maxima][more]
XP_022945147.18.9e-1596.15small G protein signaling modulator 2-like isoform X2 [Cucurbita moschata][more]
XP_022945150.18.9e-1596.15small G protein signaling modulator 2-like isoform X4 [Cucurbita moschata][more]
BLAST of Lag0020159 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0020159.1Lag0020159.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090630 activation of GTPase activity
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005096 GTPase activator activity