Lag0020011 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0020011
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	remorin
Location	chr5: 47376615 .. 47377861 (-)
RNA-Seq Expression	Lag0020011
Synteny	Lag0020011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGATGACCCCAGCAAGCCCGAATCTCAATCTCCCTCCGACCCCCCTCCGCCGCCTGCGACGGAGCCGCTGGAGGAGCCGGCCAAAGACGTGGCGGAGGAGAAATCCATCATCCCCTTAACCCCACCACCGGAGGAGAAGCCGGCCGATGACTCCAAAGCTCTGGCAATCGTTGAAAGTAATTTACAGATATAAAGCTCTCAACTTTTTCATTTTTTTTTTCAGCTGTTTGGAATTTTGAAATTCATTTTTCTTTTTTCTTTGGATTTTTAAAAAGGGAAACCTGAAAATTTTTGTGGGTCTGTGTTGAAATTTCATGTTTGGCTCTGTTTTTTTTGGGGATTGACAGAGACTGAAGCAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATTAATAGAGGTAATTAATTGGTGATATGAAATGATTAATGTTAATAATTTTAATTTCCTAATGAATTATTGTATTTTTTTTTTATTTTTTTTTTTTATGGTTATTAGATGCTGTGCTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATCAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAACAGGTACACATCATCTGTTTTTTGGGAAATTTTGTAAGAGAAAATTACAAATTAATACAAAATTGTCCTTGATGAACAAGTACTATAAAAACTCAAAATCCAAAATAAAAAAACCAACTGGCAAGTTCAAGATTGCCTTTTTATATGATTCGTGATTCCATCGCGGGTGAGTTTGTTCTAGACGTCTATAATCACACAAATTCAAATTTTTACAATCCTCATTTCATATTTATGATGTAATATTCTAAAAACAAACGCTTGTATAAATATAAATTCTTTTTTGAGCAGAGCTCACAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCGGCAGTCGAGGCCGAACTAAAGCGGATCGAGGTAAGCGATATGAGCGTCGAATCTGTTTGGATGACGAGAAAATTTTCGAACGTATACGTAAGAATATATGTTTGAATTTGAGTGCAGGAAAAGTTGGAGAAGAAGAAAGCGGAGTATATTGAGAAAATGAAGAACAAAATAGCATTGATTCACAAAGCAGCAGAAGAAAAGAGGGCAGAAATTGAAGCCAAACGTGGAGAAGATAAGCTTAAGGCAGAGGAAATTGCAGCAAAACACAGAGCAACTGGAACTGCTCCAAAGAAGATCATTGGTTGTTTCTAA

mRNA sequence

ATGGCCGCCGATGACCCCAGCAAGCCCGAATCTCAATCTCCCTCCGACCCCCCTCCGCCGCCTGCGACGGAGCCGCTGGAGGAGCCGGCCAAAGACGTGGCGGAGGAGAAATCCATCATCCCCTTAACCCCACCACCGGAGGAGAAGCCGGCCGATGACTCCAAAGCTCTGGCAATCGTTGAAAAGACTGAAGCAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATTAATAGAGATGCTGTGCTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATCAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAACAGAGCTCACAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCGGCAGTCGAGGCCGAACTAAAGCGGATCGAGGAAAAGTTGGAGAAGAAGAAAGCGGAGTATATTGAGAAAATGAAGAACAAAATAGCATTGATTCACAAAGCAGCAGAAGAAAAGAGGGCAGAAATTGAAGCCAAACGTGGAGAAGATAAGCTTAAGGCAGAGGAAATTGCAGCAAAACACAGAGCAACTGGAACTGCTCCAAAGAAGATCATTGGTTGTTTCTAA

Coding sequence (CDS)

ATGGCCGCCGATGACCCCAGCAAGCCCGAATCTCAATCTCCCTCCGACCCCCCTCCGCCGCCTGCGACGGAGCCGCTGGAGGAGCCGGCCAAAGACGTGGCGGAGGAGAAATCCATCATCCCCTTAACCCCACCACCGGAGGAGAAGCCGGCCGATGACTCCAAAGCTCTGGCAATCGTTGAAAAGACTGAAGCAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATTAATAGAGATGCTGTGCTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATCAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAACAGAGCTCACAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCGGCAGTCGAGGCCGAACTAAAGCGGATCGAGGAAAAGTTGGAGAAGAAGAAAGCGGAGTATATTGAGAAAATGAAGAACAAAATAGCATTGATTCACAAAGCAGCAGAAGAAAAGAGGGCAGAAATTGAAGCCAAACGTGGAGAAGATAAGCTTAAGGCAGAGGAAATTGCAGCAAAACACAGAGCAACTGGAACTGCTCCAAAGAAGATCATTGGTTGTTTCTAA

Protein sequence

MAADDPSKPESQSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIVEKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKAEEIAAKHRATGTAPKKIIGCF

Homology

[Close]

BLAST of Lag0020011 vs. NCBI nr
Match: XP_038875881.1 (remorin-like isoform X2 [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 173/201 (86.07%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 1   MAADDPSKPESQSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIV 60
           MAAD+P+K ESQSPS+ PP PA + +EE  KDVAEEKSIIPLT PPE KPADDSKALA +
Sbjct: 1   MAADEPNKVESQSPSERPPLPAADSMEERTKDVAEEKSIIPLT-PPEVKPADDSKALATI 60

Query: 61  EKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 120
           EKT  KAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS
Sbjct: 61  EKTHEKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 120

Query: 121 WENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKA 180
           WENS KAAVEAELK+IEEKLEKKKAEYIEKMKNKIALIHK+AEEK+A+IEAKRGE+K+KA
Sbjct: 121 WENSNKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKADIEAKRGEEKIKA 180

Query: 181 EEIAAKHRATGTAPKKIIGCF 202
           EEIAAK+R+TGTAPKKI+GCF
Sbjct: 181 EEIAAKYRSTGTAPKKILGCF 200

[Close]

BLAST of Lag0020011 vs. NCBI nr
Match: XP_008439225.1 (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 292.7 bits (748), Expect = 2.4e-75
Identity = 171/201 (85.07%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 2   AADDPSKPES-QSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIV 61
           ++D+P K ES +SPS+PPPP A EP ++   DVAEEKSIIPL PP +EKPADDSKALAIV
Sbjct: 3   SSDEPKKIESEESPSEPPPPAAAEPTKD---DVAEEKSIIPLPPPEDEKPADDSKALAIV 62

Query: 62  EKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 121
           EK++ KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS
Sbjct: 63  EKSDEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 122

Query: 122 WENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKA 181
           WENSKKAAVEAELK+IEEKLEKKK EYIEKMKNKIALIHK AEEK+A IEAKRGE+KLKA
Sbjct: 123 WENSKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKA 182

Query: 182 EEIAAKHRATGTAPKKIIGCF 202
           EEIAAKHRATGTAPKKI GCF
Sbjct: 183 EEIAAKHRATGTAPKKIFGCF 200

[Close]

BLAST of Lag0020011 vs. NCBI nr
Match: XP_038875876.1 (remorin-like isoform X1 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 4.0e-75
Identity = 172/206 (83.50%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MAADDPSKPESQSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIV 60
           MAAD+P+K ESQSPS+ PP PA + +EE  KDVAEEKSIIPLT PPE KPADDSKALA +
Sbjct: 1   MAADEPNKVESQSPSERPPLPAADSMEERTKDVAEEKSIIPLT-PPEVKPADDSKALATI 60

Query: 61  E-----KTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKL 120
           E     +T  KAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKL
Sbjct: 61  ESFGMIETHEKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKL 120

Query: 121 SAIGSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGE 180
           SAIGSWENS KAAVEAELK+IEEKLEKKKAEYIEKMKNKIALIHK+AEEK+A+IEAKRGE
Sbjct: 121 SAIGSWENSNKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKADIEAKRGE 180

Query: 181 DKLKAEEIAAKHRATGTAPKKIIGCF 202
           +K+KAEEIAAK+R+TGTAPKKI+GCF
Sbjct: 181 EKIKAEEIAAKYRSTGTAPKKILGCF 205

[Close]

BLAST of Lag0020011 vs. NCBI nr
Match: KAA0033640.1 (remorin [Cucumis melo var. makuwa])

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-74
Identity = 170/201 (84.58%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 2   AADDPSKPES-QSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIV 61
           ++D+P K ES +SP +PPPP A EP ++   DVAEEKSIIPL PP +EKPADDSKALAIV
Sbjct: 3   SSDEPKKIESEESPLEPPPPAAAEPTKD---DVAEEKSIIPLPPPEDEKPADDSKALAIV 62

Query: 62  EKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 121
           EK++ KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS
Sbjct: 63  EKSDEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 122

Query: 122 WENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKA 181
           WENSKKAAVEAELK+IEEKLEKKK EYIEKMKNKIALIHK AEEK+A IEAKRGE+KLKA
Sbjct: 123 WENSKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKA 182

Query: 182 EEIAAKHRATGTAPKKIIGCF 202
           EEIAAKHRATGTAPKKI GCF
Sbjct: 183 EEIAAKHRATGTAPKKIFGCF 200

[Close]

BLAST of Lag0020011 vs. NCBI nr
Match: XP_022141174.1 (remorin-like [Momordica charantia])

HSP 1 Score: 274.6 bits (701), Expect = 6.6e-70
Identity = 162/193 (83.94%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 10  ESQSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPE-EKPADDSKALAIVEKTEAKAE 69
           ES+S S PPP PA EP+EEP+KDVAEEKSIIP TPP E E PAD SKALA+VEKT  KAE
Sbjct: 6   ESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAE 65

Query: 70  EKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAA 129
           +KEKD+ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENSKKAA
Sbjct: 66  QKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAA 125

Query: 130 VEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKAEEIAAKHR 189
           VEAELK+IEEKLEKKKAEYIEKMKNKIA IHK+AEEK+A IEA RGED LKAEE AAK R
Sbjct: 126 VEAELKQIEEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEAIRGEDMLKAEETAAKWR 185

Query: 190 ATGTAPKKIIGCF 202
           ATGTAP K++GCF
Sbjct: 186 ATGTAPNKLLGCF 198

[Close]

BLAST of Lag0020011 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-56
Identity = 136/188 (72.34%), Postives = 159/188 (84.57%), Query Frame = 0


Query: 18  PPPPATEPLEEPAKDVAEEKSII-PLTPPP--EEKPADDSKALAIVE-KTEAKAEEKEKD 77
           P PPA  P+E P + VA+EK+I+ P  PPP  E++  DDSKAL +VE K    A+EK+  
Sbjct: 14  PAPPAPGPVEAPKEVVADEKAIVAPALPPPAEEKEKPDDSKALVVVETKAPEPADEKK-- 73

Query: 78  SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAEL 137
            EGSI+RDAVLARVATEKR+SLIKAWEESEKSKAEN+A KK+SAIG+WENSKKA +EAEL
Sbjct: 74  -EGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAEL 133

Query: 138 KRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKAEEIAAKHRATGTA 197
           K++EE+LEKKKAEY EKMKNKIAL+HK AEEKRA IEAKRGED LKAEE+AAK+RATGTA
Sbjct: 134 KKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTA 193

Query: 198 PKKIIGCF 202
           PKKI+G F
Sbjct: 194 PKKILGIF 198

[Close]

BLAST of Lag0020011 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.4e-51
Identity = 131/207 (63.29%), Postives = 162/207 (78.26%), Query Frame = 0


Query: 1   MAADDPSKPESQSPSDPPPPPATEPLEEP--AKDVA-EEKSIIP----LTPPPEEKPADD 60
           MA ++P K  +++ S+P P P   P+E+P  A DVA +EK + P     +P P E+  +D
Sbjct: 1   MAEEEPKK-VTETVSEPTPTPEV-PVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQED 60

Query: 61  SKALAIVEKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHK 120
           SKA+  V   E + E+K    EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A K
Sbjct: 61  SKAIVPVVPKEVEEEKK----EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEK 120

Query: 121 KLSAIGSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKR 180
           KLS+IGSWEN+KKAAVEAELK++EE+LEKKKAEY+E+MKNKIA IHK AEEKRA IEAKR
Sbjct: 121 KLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKR 180

Query: 181 GEDKLKAEEIAAKHRATGTAPKKIIGC 201
           GE+ LKAEE+AAK+RATGTAPKK+ GC
Sbjct: 181 GEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of Lag0020011 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44
Identity = 119/209 (56.94%), Postives = 149/209 (71.29%), Query Frame = 0


Query: 1   MAADDPSKPESQSPSDPPPP-----PATEPLEEPA---KDVAEEKSIIPLTPPPEEKPAD 60
           + ++ P+K  + +P+D P P     PA  P   PA   KDVAEEK    +  PP E+  D
Sbjct: 9   LESESPAKVTTPAPADTPAPAPAEIPAPAPAPTPADVTKDVAEEK----IQNPPPEQIFD 68

Query: 61  DSKALAIVEKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAH 120
           DSKAL +VEK   +     K +  S++RD  LA ++ EKRLS ++AWEESEKSKAEN+A 
Sbjct: 69  DSKALTVVEK-PVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAE 128

Query: 121 KKLSAIGSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAK 180
           KK++ + +WENSKKAAVEA+LK+IEE+LEKKKAEY E+MKNK+A IHK AEE+RA IEAK
Sbjct: 129 KKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAK 188

Query: 181 RGEDKLKAEEIAAKHRATGTAPKKIIGCF 202
           RGED LKAEE AAK+RATG  PK   GCF
Sbjct: 189 RGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of Lag0020011 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.7e-41
Identity = 115/195 (58.97%), Postives = 140/195 (71.79%), Query Frame = 0


Query: 7   SKPESQSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIVEKTEAK 66
           SK + +SP+     PA EP   P  +VA+EK      PPP E     SKALA+VEK   +
Sbjct: 8   SKVDVESPA--VLAPAKEPTPAPV-EVADEKI---HNPPPVE-----SKALAVVEK-PIE 67

Query: 67  AEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKK 126
               +K S GS +RD +LA +  EK+ S IKAWEESEKSKAENRA KK+S + +WENSKK
Sbjct: 68  EHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKK 127

Query: 127 AAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKAEEIAAK 186
           AAVEA+L++IEEKLEKKKA+Y EKMKNK+A IHK AEEKRA +EAK+GE+ LKAEE+ AK
Sbjct: 128 AAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAK 187

Query: 187 HRATGTAPKKIIGCF 202
           +RATG  PK   GCF
Sbjct: 188 YRATGVVPKATCGCF 190

[Close]

BLAST of Lag0020011 vs. ExPASy Swiss-Prot
Match: Q93YN8 (Remorin 4.1 OS=Arabidopsis thaliana OX=3702 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-08
Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = 0


Query: 50  PADDSKALAIVEKTEAKAEEKEKD----SEGSINR---DAVLARVATEKRLSLIKAWEES 109
           P +DS   AIV       +  E +    S G  NR    A + RV  E+  + I AW+ +
Sbjct: 136 PEEDSNPWAIVPDDYNNRDGSENNIVLASSGGQNRMVTTASVQRVKREEVEAKITAWQTA 195

Query: 110 EKSKAENRAHKKLSAIGSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAA 169
           + +K  NR  ++ + I  W N +     + +K+IE KLE ++A+ +EK +NK+A   + A
Sbjct: 196 KVAKINNRFKRQDAVINGWLNEQVHRANSWMKKIERKLEDRRAKAMEKTQNKVAKAQRKA 255

Query: 170 EEKRAEIEAKRGEDKLKAEEIAAKHRATGTAPKK 197
           EE+RA  E KRG +  +  E+A   RA G  P K
Sbjct: 256 EERRATAEGKRGTEVARVLEVANLMRAVGRPPAK 289

[Close]

BLAST of Lag0020011 vs. ExPASy TrEMBL
Match: A0A1S3AXW2 (remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.1e-75
Identity = 171/201 (85.07%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 2   AADDPSKPES-QSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIV 61
           ++D+P K ES +SPS+PPPP A EP ++   DVAEEKSIIPL PP +EKPADDSKALAIV
Sbjct: 3   SSDEPKKIESEESPSEPPPPAAAEPTKD---DVAEEKSIIPLPPPEDEKPADDSKALAIV 62

Query: 62  EKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 121
           EK++ KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS
Sbjct: 63  EKSDEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 122

Query: 122 WENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKA 181
           WENSKKAAVEAELK+IEEKLEKKK EYIEKMKNKIALIHK AEEK+A IEAKRGE+KLKA
Sbjct: 123 WENSKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKA 182

Query: 182 EEIAAKHRATGTAPKKIIGCF 202
           EEIAAKHRATGTAPKKI GCF
Sbjct: 183 EEIAAKHRATGTAPKKIFGCF 200

[Close]

BLAST of Lag0020011 vs. ExPASy TrEMBL
Match: A0A5A7SRU5 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.7e-75
Identity = 170/201 (84.58%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 2   AADDPSKPES-QSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIV 61
           ++D+P K ES +SP +PPPP A EP ++   DVAEEKSIIPL PP +EKPADDSKALAIV
Sbjct: 3   SSDEPKKIESEESPLEPPPPAAAEPTKD---DVAEEKSIIPLPPPEDEKPADDSKALAIV 62

Query: 62  EKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 121
           EK++ KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS
Sbjct: 63  EKSDEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 122

Query: 122 WENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKA 181
           WENSKKAAVEAELK+IEEKLEKKK EYIEKMKNKIALIHK AEEK+A IEAKRGE+KLKA
Sbjct: 123 WENSKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKA 182

Query: 182 EEIAAKHRATGTAPKKIIGCF 202
           EEIAAKHRATGTAPKKI GCF
Sbjct: 183 EEIAAKHRATGTAPKKIFGCF 200

[Close]

BLAST of Lag0020011 vs. ExPASy TrEMBL
Match: A0A0A0L9S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.1e-73
Identity = 168/203 (82.76%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MAADDPSKPE-SQSPSDPPPPPATEPLEEPAK-DVAEEKSIIPLTPPPEEKPADDSKALA 60
           MA+D+P + E  +SPS+ PPPP    + EP K DVAEEKSIIPL PP +EKPADDSKALA
Sbjct: 1   MASDEPKQIEPEESPSEAPPPPPPPAVAEPTKDDVAEEKSIIPLLPPEDEKPADDSKALA 60

Query: 61  IVEKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI 120
           IVEK++ KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI
Sbjct: 61  IVEKSDEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI 120

Query: 121 GSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKL 180
           GSWENSKKAAVEAELK+IEEK EKKK E+IEKMKNKIA IHK AEEK+A IEAKRGE+KL
Sbjct: 121 GSWENSKKAAVEAELKQIEEKFEKKKGEHIEKMKNKIASIHKKAEEKKAVIEAKRGEEKL 180

Query: 181 KAEEIAAKHRATGTAPKKIIGCF 202
           KAEEIAAKHRATGTAPKKI GCF
Sbjct: 181 KAEEIAAKHRATGTAPKKIFGCF 203

[Close]

BLAST of Lag0020011 vs. ExPASy TrEMBL
Match: A0A6J1CHU8 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111011630 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.2e-70
Identity = 162/193 (83.94%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 10  ESQSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPE-EKPADDSKALAIVEKTEAKAE 69
           ES+S S PPP PA EP+EEP+KDVAEEKSIIP TPP E E PAD SKALA+VEKT  KAE
Sbjct: 6   ESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAE 65

Query: 70  EKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAA 129
           +KEKD+ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENSKKAA
Sbjct: 66  QKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAA 125

Query: 130 VEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKAEEIAAKHR 189
           VEAELK+IEEKLEKKKAEYIEKMKNKIA IHK+AEEK+A IEA RGED LKAEE AAK R
Sbjct: 126 VEAELKQIEEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEAIRGEDMLKAEETAAKWR 185

Query: 190 ATGTAPKKIIGCF 202
           ATGTAP K++GCF
Sbjct: 186 ATGTAPNKLLGCF 198

[Close]

BLAST of Lag0020011 vs. ExPASy TrEMBL
Match: A0A6J1HZY5 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111467746 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 8.8e-68
Identity = 159/201 (79.10%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MAADDPSKPESQSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIV 60
           MA D+P K ES+ PS+P PP A E +EEP K+VAEEKSII LT PPE+ PADDSK L I 
Sbjct: 1   MADDEPKKLESEPPSEPSPPQAAELVEEPTKNVAEEKSIIQLT-PPEKTPADDSKPLLIF 60

Query: 61  EKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 120
           EKTEAK EEK+     SINRDA LARVATEKRL+LIKAWEESEKS+ ENRAHKKLS IGS
Sbjct: 61  EKTEAKTEEKQ---SSSINRDAELARVATEKRLTLIKAWEESEKSRTENRAHKKLSEIGS 120

Query: 121 WENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKA 180
           WE+SKKAAVEAELK+IEEK EKKKAEY+EKMKNKIALIHKAAEEK+A IEAKRGE+KLKA
Sbjct: 121 WESSKKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKA 180

Query: 181 EEIAAKHRATGTAPKKIIGCF 202
           EEIAAK+RATGTAPKKI+GCF
Sbjct: 181 EEIAAKYRATGTAPKKILGCF 197

[Close]

BLAST of Lag0020011 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 201.4 bits (511), Expect = 6.7e-52
Identity = 131/207 (63.29%), Postives = 162/207 (78.26%), Query Frame = 0


Query: 1   MAADDPSKPESQSPSDPPPPPATEPLEEP--AKDVA-EEKSIIP----LTPPPEEKPADD 60
           MA ++P K  +++ S+P P P   P+E+P  A DVA +EK + P     +P P E+  +D
Sbjct: 1   MAEEEPKK-VTETVSEPTPTPEV-PVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQED 60

Query: 61  SKALAIVEKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHK 120
           SKA+  V   E + E+K    EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A K
Sbjct: 61  SKAIVPVVPKEVEEEKK----EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEK 120

Query: 121 KLSAIGSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKR 180
           KLS+IGSWEN+KKAAVEAELK++EE+LEKKKAEY+E+MKNKIA IHK AEEKRA IEAKR
Sbjct: 121 KLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKR 180

Query: 181 GEDKLKAEEIAAKHRATGTAPKKIIGC 201
           GE+ LKAEE+AAK+RATGTAPKK+ GC
Sbjct: 181 GEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of Lag0020011 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 199.5 bits (506), Expect = 2.5e-51
Identity = 132/207 (63.77%), Postives = 163/207 (78.74%), Query Frame = 0


Query: 1   MAADDPSKPESQSPSDPPPPPATEPLEEP--AKDVA-EEKSIIP----LTPPPEEKPADD 60
           MA ++P K  +++ S+P P P   P+E+P  A DVA +EK + P     +P P E+  +D
Sbjct: 1   MAEEEPKK-VTETVSEPTPTPEV-PVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQED 60

Query: 61  SKALAIVEKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHK 120
           SKA+  V     K EE++K  EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A K
Sbjct: 61  SKAIVPV---VPKVEEEKK--EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEK 120

Query: 121 KLSAIGSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKR 180
           KLS+IGSWEN+KKAAVEAELK++EE+LEKKKAEY+E+MKNKIA IHK AEEKRA IEAKR
Sbjct: 121 KLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKR 180

Query: 181 GEDKLKAEEIAAKHRATGTAPKKIIGC 201
           GE+ LKAEE+AAK+RATGTAPKK+ GC
Sbjct: 181 GEEILKAEELAAKYRATGTAPKKLFGC 200

[Close]

BLAST of Lag0020011 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.9e-46
Identity = 108/176 (61.36%), Postives = 136/176 (77.27%), Query Frame = 0


Query: 26  LEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIVEKTEAKAEEKEKDSEGSINRDAVLA 85
           LEE  K +  E      +PP +E+ +DDSKA+ +V   +   E+K+    GS++RDAVL 
Sbjct: 3   LEEQKKVIMPEAVASEPSPPSKEEKSDDSKAIVLVVAAKEPTEDKK---VGSVHRDAVLV 62

Query: 86  RVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKRIEEKLEKKKA 145
           R+  +KR+SLIKAWEE+EKSK EN+A KK+S++G+WENSKKA+VEAELK+IEE+L KKKA
Sbjct: 63  RLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKA 122

Query: 146 EYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKAEEIAAKHRATGTAPKKIIGCF 202
            Y E+MKNKIA IHK AEEKRA  EAKRGED LKAEE+AAK+RATGTAP K+ G F
Sbjct: 123 HYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of Lag0020011 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 181.4 bits (459), Expect = 7.1e-46
Identity = 119/209 (56.94%), Postives = 149/209 (71.29%), Query Frame = 0


Query: 1   MAADDPSKPESQSPSDPPPP-----PATEPLEEPA---KDVAEEKSIIPLTPPPEEKPAD 60
           + ++ P+K  + +P+D P P     PA  P   PA   KDVAEEK    +  PP E+  D
Sbjct: 9   LESESPAKVTTPAPADTPAPAPAEIPAPAPAPTPADVTKDVAEEK----IQNPPPEQIFD 68

Query: 61  DSKALAIVEKTEAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAH 120
           DSKAL +VEK   +     K +  S++RD  LA ++ EKRLS ++AWEESEKSKAEN+A 
Sbjct: 69  DSKALTVVEK-PVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAE 128

Query: 121 KKLSAIGSWENSKKAAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAK 180
           KK++ + +WENSKKAAVEA+LK+IEE+LEKKKAEY E+MKNK+A IHK AEE+RA IEAK
Sbjct: 129 KKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAK 188

Query: 181 RGEDKLKAEEIAAKHRATGTAPKKIIGCF 202
           RGED LKAEE AAK+RATG  PK   GCF
Sbjct: 189 RGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of Lag0020011 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-42
Identity = 115/195 (58.97%), Postives = 140/195 (71.79%), Query Frame = 0


Query: 7   SKPESQSPSDPPPPPATEPLEEPAKDVAEEKSIIPLTPPPEEKPADDSKALAIVEKTEAK 66
           SK + +SP+     PA EP   P  +VA+EK      PPP E     SKALA+VEK   +
Sbjct: 8   SKVDVESPA--VLAPAKEPTPAPV-EVADEKI---HNPPPVE-----SKALAVVEK-PIE 67

Query: 67  AEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKK 126
               +K S GS +RD +LA +  EK+ S IKAWEESEKSKAENRA KK+S + +WENSKK
Sbjct: 68  EHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKK 127

Query: 127 AAVEAELKRIEEKLEKKKAEYIEKMKNKIALIHKAAEEKRAEIEAKRGEDKLKAEEIAAK 186
           AAVEA+L++IEEKLEKKKA+Y EKMKNK+A IHK AEEKRA +EAK+GE+ LKAEE+ AK
Sbjct: 128 AAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAK 187

Query: 187 HRATGTAPKKIIGCF 202
           +RATG  PK   GCF
Sbjct: 188 YRATGVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of Lag0020011 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875881.1	1.9e-77	86.07	remorin-like isoform X2 [Benincasa hispida]	[more]
XP_008439225.1	2.4e-75	85.07	PREDICTED: remorin [Cucumis melo]	[more]
XP_038875876.1	4.0e-75	83.50	remorin-like isoform X1 [Benincasa hispida]	[more]
KAA0033640.1	1.2e-74	84.58	remorin [Cucumis melo var. makuwa]	[more]
XP_022141174.1	6.6e-70	83.94	remorin-like [Momordica charantia]	[more]

BLAST of Lag0020011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	1.1e-56	72.34	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	9.4e-51	63.29	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	1.0e-44	56.94	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	6.7e-41	58.97	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q93YN8	3.4e-08	33.77	Remorin 4.1 OS=Arabidopsis thaliana OX=3702 GN=REM4.1 PE=1 SV=1	[more]

BLAST of Lag0020011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AXW2	1.1e-75	85.07	remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1	[more]
A0A5A7SRU5	5.7e-75	84.58	Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 S...	[more]
A0A0A0L9S3	3.1e-73	82.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1	[more]
A0A6J1CHU8	3.2e-70	83.94	remorin-like OS=Momordica charantia OX=3673 GN=LOC111011630 PE=3 SV=1	[more]
A0A6J1HZY5	8.8e-68	79.10	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111467746 PE=3 SV=1	[more]

BLAST of Lag0020011 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	6.7e-52	63.29	Remorin family protein	[more]
AT5G23750.2	2.5e-51	63.77	Remorin family protein	[more]
AT3G48940.1	1.9e-46	61.36	Remorin family protein	[more]
AT3G61260.1	7.1e-46	56.94	Remorin family protein	[more]
AT2G45820.1	4.8e-42	58.97	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..81
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 5..201
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 5..201
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 91..196 e-value: 1.0E-31 score: 108.9
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 30..87 e-value: 2.3E-22 score: 78.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0020011.1	Lag0020011.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress