Lag0019988 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019988
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Location	chr5: 47209267 .. 47212564 (-)
RNA-Seq Expression	Lag0019988
Synteny	Lag0019988

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAGCACAATTCTCTCTACCAACCCGTTAATTCGGTTGACATCTACTCCCCGATTTCGCGCTAAAAGTAGGTGGAAGAGTGCAGCAATTTCTGCTCGTCTTGACGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGCTTCACACTCGGTATCTCTCTTTCTCACTCTCTCTGTAAATGGGTACTTTCTGAAGGAATATGTGAATTTGGGGATTTTGGAAGAATTGAATTTTTATTTGTAAGTGTAACATTTCGTTGTGATATGGGGTTTAGGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGCTATGGATTTGGTTCACTTCTTCTTTTGAATCACTTTGTTGGTTCGAATTCAGCTGCTTCCGTCACCCCAGCACAGTTAGTAAGCAAACACAAATTTCTGTGAACGCCTTTGTTTTATGATTCTTGTTGGATTTTTATTATTTTCTGCTGTTTGATGTGGGTTTTGTTATTTATAGAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATTTCACTTCCCTACTTGGGAAAGTTTCTTAAGGTAACGTATTAGATATCACATTATTGTCCTGCTTATATTGTTATTTTTTCATCTTCTTCTTCTACTGGAAAACTTCCGTTCAACTCTCTAAGAGTGAAAAAAAGGAGGATTAGAGGTGCTTGATACTTCTGGTTTGTGTAGTTCTTAGCACTGCCACAGTGCCATTGTCCGCCAACGCTCAAGTAGGTATTGATGACGGAAAGGTAGAACTCTAAAGAAGAGACTGTGACAGGGAGTAAATATATTTGATGGAAATTGTAAAACGAGAATTACCTATCGAGGGATTGCTGTGGGAATGCTTAGCTACAAAAGGGCCCGTTTGGTAACGTTCTCGTTTATTGTTTCCTTTTCTTCATTTTTAATAAAGAAAAATATAATTTCATGACCCTAACACCTATACATTCAATAATAATAAACCTATATTCTTATTTATGTTTGGAAAAAATTGGAAACAAAAACAAAAAAGAGAAACTACTTTTAGTTGTTCCCAAAAGTTCTATACAAATTTTGGGAGTGTTTCTAAAAAATGAGAAACAAGAAACATACATAGTTATTAAATGCTTAGATTTCTTAATAAAATTGGAAACAAGAAACAAGAAACGAGAATGTTACCAAACGGGCCCTGTTTCCTGTTTTTGTACTTGAGTAGAACTTCAAATGGTGGAGTATATGTGACAGGATTTGTAAACTTAAGGATGATGTCTTACTAGACCTGGGGTTGGGTGGATGGCCATTGATAATCCTGTCTAAGTTCCCGAATGCCTGTTCAGCCAAATTCTTCTCAAATTCGATTCAGCCTCTCTTGACTTTGAATAGGATTGTCATTCATCAACCCGATAATTATCTAGACATCTCAGTCATCTTATGATTCTACTTGTAGAGTTCATCTTGGAATCTTCTTGTAGATAGAAGCTCTCTCGTAAGTCATCTGTCTTACTTAAATTTCTTCTTCAATATCCTATTCTTGTTATACCAATTTGGCTTAAATGTCACCTCAGATCTATATATCTAGCCTGTTCATCTCTGATAATGACTTATTTGCTTGGACCAGACAACAAAAAAGGAGTCTCACCACCTCCTTACATTATCCTCATATAAGGTTGCCCACATGACCTTATTTATTAAATAAGACTATAAGATCTTCTCAGATCGTTGATGAGGCCATTGCCACATTTTTGTTCTACATTCTAGCATCATAGTATTGCATGAATTTCTGACTTGAGTATTAGAGTAACTTCACGAAGGCACCATGTTGAATGTTGATGTCTAGTTGAAGCATTGAGACTTTTTCTCCCTCACAGTTGCTAGAGTCCTGTATTTGATTTTTGATTGGTTGGTTTACATGCCAAACTGTCTTCGTTTAAATAGCAATCAATATATATCCAATCTTATTGACTTTAACTCTTGCTTGGCCATTGCTTACTGCTTAGATAATTGAAATAAGGAAAAGTATCCATCGCTGCTTGCAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGTGCTGAGCAAATATTTGTCTTGTCACAAAATGTATCCGATAATGTGAAGGAAGACTTGGCTTGGGCAACTTACATCTTGCTGCGCAATACAAACAGTATATCAGTGGTATCTCTCAAACTTTTGTCGCTTGCTTACATTTTACTTCACAAATATGTAGCAAGTAAACACACTGTATTCAAAACATATTTTTTTTAGCTGTCCTTGTCCTTGATACTGTCTAAAATTTAATTTTTGAATCATTTGTTTTCTTTGGAATCAGTTAATACAGATTAGAGGGGAGTTATGTGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTGTCTGCATTGAATGATTCCCTCTATTTTCCTCAGATTTCAGGTATATGATTGCCGTCTTTATAATGTTTTCATGAAGGTCTTTTTCGCTCTCTTGCTGCACATGAAATAATGTCTTAGAAACGACCATAATTAGAAGAGAAAATGTCGTTTTTTCCTTAAAAAATTACTTATGCTGATGAATGGAATAAATAGATATATTATTGAAGATAAATAGTTGTAACTTCGAATTTCTATATTATATTTGAAGTTGAGATAGGCCAACGATAGTATATTTGTACTAGAAGAACGTTAAGGTGGGGGGAGGGCTTAGCATAGGAATTAGTAGTTAGTCGGTTAGGCCCACTCTTGTGACTTGCTAATGTGACGTTAGGATGGAGAGGAGTCCTGAGTGAGATAGGAATATTGGATGTGGTGTCTATTGGAGCCTCTACTCTGTAAAGGACTCATTGATAATCAACCTCTATCAAAATTTGAAGTAATCTGCAATGTCATATTGGTTTCTTCTCCTTGTGGTGATGAGGTGTTACTCCTGGTCGTTTCTCTGATTAGACATGCACCGATAGTTAAAGTTAAATAAATACTATGATGTTCTATTCAACCTTTCAAGGTTTTCGCAACTTTTTTCAGAATCTGAACTTTGGCAAATGCTGCCCAAGGGCACTCGCTCAGTTTTGGTACAGCCGGTGGTTCAAAATTTAAGGCGAAGTGGCAATGAGATGGAAAAGATTGGAGGATTCATATTGCTGGCTTCAAGTCTAAGTTATGCGTTTAGCGATAAAGATAGAGCCTGGATTAAAGCTCTTGCTAGCAAATTTGACGATAGAGACATACTCTGA

mRNA sequence

ATGACCAGCACAATTCTCTCTACCAACCCGTTAATTCGGTTGACATCTACTCCCCGATTTCGCGCTAAAAGTAGGTGGAAGAGTGCAGCAATTTCTGCTCGTCTTGACGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGCTTCACACTCGGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGCTATGGATTTGGTTCACTTCTTCTTTTGAATCACTTTGTTGGTTCGAATTCAGCTGCTTCCGTCACCCCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATTTCACTTCCCTACTTGGGAAAGTTTCTTAAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGTGCTGAGCAAATATTTGTCTTGTCACAAAATGTATCCGATAATGTGAAGGAAGACTTGGCTTGGGCAACTTACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACAGATTAGAGGGGAGTTATGTGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTGTCTGCATTGAATGATTCCCTCTATTTTCCTCAGATTTCAGAATCTGAACTTTGGCAAATGCTGCCCAAGGGCACTCGCTCAGTTTTGGTACAGCCGGTGGTTCAAAATTTAAGGCGAAGTGGCAATGAGATGGAAAAGATTGGAGGATTCATATTGCTGGCTTCAAGTCTAAGTTATGCGTTTAGCGATAAAGATAGAGCCTGGATTAAAGCTCTTGCTAGCAAATTTGACGATAGAGACATACTCTGA

Coding sequence (CDS)

ATGACCAGCACAATTCTCTCTACCAACCCGTTAATTCGGTTGACATCTACTCCCCGATTTCGCGCTAAAAGTAGGTGGAAGAGTGCAGCAATTTCTGCTCGTCTTGACGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGCTTCACACTCGGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGCTATGGATTTGGTTCACTTCTTCTTTTGAATCACTTTGTTGGTTCGAATTCAGCTGCTTCCGTCACCCCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATTTCACTTCCCTACTTGGGAAAGTTTCTTAAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGTGCTGAGCAAATATTTGTCTTGTCACAAAATGTATCCGATAATGTGAAGGAAGACTTGGCTTGGGCAACTTACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACAGATTAGAGGGGAGTTATGTGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTGTCTGCATTGAATGATTCCCTCTATTTTCCTCAGATTTCAGAATCTGAACTTTGGCAAATGCTGCCCAAGGGCACTCGCTCAGTTTTGGTACAGCCGGTGGTTCAAAATTTAAGGCGAAGTGGCAATGAGATGGAAAAGATTGGAGGATTCATATTGCTGGCTTCAAGTCTAAGTTATGCGTTTAGCGATAAAGATAGAGCCTGGATTAAAGCTCTTGCTAGCAAATTTGACGATAGAGACATACTCTGA

Protein sequence

MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLKGAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVVQNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL

Homology

[Close]

BLAST of Lag0019988 vs. NCBI nr
Match: XP_022141087.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Momordica charantia] >XP_022141088.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Momordica charantia] >XP_022141089.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Momordica charantia] >XP_022141090.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 504.6 bits (1298), Expect = 5.7e-139
Identity = 257/288 (89.24%), Postives = 272/288 (94.44%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           MT +ILS NPLIRLTSTPRFRAK+R K+ A+SARLDDSKNSANQQLNLSVLRFTLGIPGL
Sbjct: 1   MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHF GSNSAA  TPAQLRTEALG+SLAAFSI+LPYLGKFLK
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGKFLK 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEA+LPEG EQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG
Sbjct: 121 GAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDI GADL+AWFEEQLQSIGLSALND LYFPQIS+SELW+MLP GTRSVLVQPV 
Sbjct: 181 YWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV- 240

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL 289
              ++SGN+MEKIGGFILLASSLSYAFSDKDRAWI+ALA+KF DRDIL
Sbjct: 241 ---KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL 284

[Close]

BLAST of Lag0019988 vs. NCBI nr
Match: XP_023542853.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542854.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542855.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542856.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542857.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542858.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542859.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.1 bits (1289), Expect = 6.2e-138
Identity = 255/287 (88.85%), Postives = 272/287 (94.77%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           M+ TILS +PLIRL+ST RFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 14  MSCTILSPDPLIRLSSTHRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 73

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHFVGSNSAA +T AQLRTEALGISLAAFSI+LPYLGKFL+
Sbjct: 74  DESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 133

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRG
Sbjct: 134 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRG 193

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDISG DLLAWFEEQLQSIGLSALND+LYFPQISES LWQMLPKGTRSVLVQPV 
Sbjct: 194 YWNSPNDISGTDLLAWFEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVA 253

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI 288
           QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Sbjct: 254 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI 300

[Close]

BLAST of Lag0019988 vs. NCBI nr
Match: XP_022945332.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945333.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945334.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945335.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945336.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945337.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945338.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945339.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945340.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945341.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-137
Identity = 254/287 (88.50%), Postives = 274/287 (95.47%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS ++QLNLSVLRFTLGIPGL
Sbjct: 17  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGL 76

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEALGISLAAFSI+LPYLGKFL+
Sbjct: 77  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 136

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQ+VSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRG
Sbjct: 137 GAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRG 196

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALND+LYFPQISES LWQMLPKGTRSVLVQPV 
Sbjct: 197 YWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVA 256

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI 288
           QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Sbjct: 257 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI 303

[Close]

BLAST of Lag0019988 vs. NCBI nr
Match: XP_022968395.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137
Identity = 255/287 (88.85%), Postives = 272/287 (94.77%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEALGISLAAFSI+LPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISES LWQML KGTRSVLVQPV 
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI 288
           QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI 287

[Close]

BLAST of Lag0019988 vs. NCBI nr
Match: XP_022968386.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968387.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968388.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968389.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968390.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968391.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968393.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968394.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137
Identity = 255/287 (88.85%), Postives = 272/287 (94.77%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEALGISLAAFSI+LPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISES LWQML KGTRSVLVQPV 
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI 288
           QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI 287

[Close]

BLAST of Lag0019988 vs. ExPASy Swiss-Prot
Match: Q9FJ81 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB2 PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.9e-82
Identity = 156/270 (57.78%), Postives = 210/270 (77.78%), Query Frame = 0


Query: 18  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGF 77
           P+F  + R  +S  I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGF
Sbjct: 12  PKFALQPRAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGF 71

Query: 78  GSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLKGAVPSGEATLPEG 137
           GSLLLLNHF   +++A ++ +Q+R+EALG+SLAAFSI+LPY+GKFLKG+V   + +LPE 
Sbjct: 72  GSLLLLNHF---SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVE-QRSLPEE 131

Query: 138 AEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADL 197
            EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +S A L
Sbjct: 132 GEQVFVISSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQL 191

Query: 198 LAWFEEQLQSIGLSALNDSLYFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEK 257
             WF++++  IGL+ + ++LYFPQ + S L   +LP GTRS+ VQP+VQN     NE +K
Sbjct: 192 HDWFKKKVDEIGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQK 251

Query: 258 IGGFILLASSLSYAFSDKDRAWIKALASKF 283
           + GF+L+AS+  YA+SDKDRAWI A+A KF
Sbjct: 252 VNGFLLVASTAGYAYSDKDRAWIGAMAEKF 273

[Close]

BLAST of Lag0019988 vs. ExPASy TrEMBL
Match: A0A6J1CJH9 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011568 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.7e-139
Identity = 257/288 (89.24%), Postives = 272/288 (94.44%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           MT +ILS NPLIRLTSTPRFRAK+R K+ A+SARLDDSKNSANQQLNLSVLRFTLGIPGL
Sbjct: 1   MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHF GSNSAA  TPAQLRTEALG+SLAAFSI+LPYLGKFLK
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGKFLK 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEA+LPEG EQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG
Sbjct: 121 GAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDI GADL+AWFEEQLQSIGLSALND LYFPQIS+SELW+MLP GTRSVLVQPV 
Sbjct: 181 YWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV- 240

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL 289
              ++SGN+MEKIGGFILLASSLSYAFSDKDRAWI+ALA+KF DRDIL
Sbjct: 241 ---KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDIL 284

[Close]

BLAST of Lag0019988 vs. ExPASy TrEMBL
Match: A0A6J1G0N4 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449603 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.2e-138
Identity = 254/287 (88.50%), Postives = 274/287 (95.47%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS ++QLNLSVLRFTLGIPGL
Sbjct: 17  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGL 76

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEALGISLAAFSI+LPYLGKFL+
Sbjct: 77  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 136

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQ+VSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRG
Sbjct: 137 GAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRG 196

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALND+LYFPQISES LWQMLPKGTRSVLVQPV 
Sbjct: 197 YWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVA 256

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI 288
           QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Sbjct: 257 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI 303

[Close]

BLAST of Lag0019988 vs. ExPASy TrEMBL
Match: A0A6J1HXW3 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467648 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.8e-138
Identity = 255/287 (88.85%), Postives = 272/287 (94.77%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEALGISLAAFSI+LPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISES LWQML KGTRSVLVQPV 
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI 288
           QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI 287

[Close]

BLAST of Lag0019988 vs. ExPASy TrEMBL
Match: A0A6J1HX31 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467648 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.8e-138
Identity = 255/287 (88.85%), Postives = 272/287 (94.77%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           M+ TILS +PLIRL+STPRFRAK+  KS  I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA +T AQLRTEALGISLAAFSI+LPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISES LWQML KGTRSVLVQPV 
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDI 288
           QNL +SGNEMEKIGGFIL+ASSLSYAFSDKDRAWI+ALA+KFD+ DI
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI 287

[Close]

BLAST of Lag0019988 vs. ExPASy TrEMBL
Match: A0A1S4DSW9 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484048 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135
Identity = 252/288 (87.50%), Postives = 269/288 (93.40%), Query Frame = 0


Query: 1   MTSTILSTNPLIRLTSTPRFRAKSRWKSAAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60
           M S+I S +PL +LTS   FRAKS+ K+ AISARLDDSKNSANQQLNLSVLRFTLGIPGL
Sbjct: 1   MISSIPSPSPLNQLTSALPFRAKSKMKAPAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLK 120
           DESYLPRWIGYGFGSLLLLNHFVGSNSAA  TPAQLRTEALGISLAAFSI+LPYLGKFLK
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLGKFLK 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180
           GAVPSGEATLPEG EQIF+LSQ VSDN+KED+AWATYILLRNTNSISVLIQ +G LCVRG
Sbjct: 121 GAVPSGEATLPEGTEQIFLLSQIVSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESELWQMLPKGTRSVLVQPVV 240
           YWNSPNDIS ADLLAWFEEQLQSIGLSAL D++YFPQISES LWQMLPKGTRSVLVQPVV
Sbjct: 181 YWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVV 240

Query: 241 QNLRRSGNEMEKIGGFILLASSLSYAFSDKDRAWIKALASKFDDRDIL 289
           QNL++SGNEMEK+GGFILLASSLSYAFSDKDRAWI+ALA+KFDDR IL
Sbjct: 241 QNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDDRAIL 288

[Close]

BLAST of Lag0019988 vs. TAIR 10
Match: AT5G52110.1 (Protein of unknown function (DUF2930) )

HSP 1 Score: 306.2 bits (783), Expect = 2.7e-83
Identity = 156/270 (57.78%), Postives = 210/270 (77.78%), Query Frame = 0


Query: 18  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGF 77
           P+F  + R  +S  I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGF
Sbjct: 12  PKFALQPRAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGF 71

Query: 78  GSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLKGAVPSGEATLPEG 137
           GSLLLLNHF   +++A ++ +Q+R+EALG+SLAAFSI+LPY+GKFLKG+V   + +LPE 
Sbjct: 72  GSLLLLNHF---SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVE-QRSLPEE 131

Query: 138 AEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADL 197
            EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +S A L
Sbjct: 132 GEQVFVISSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQL 191

Query: 198 LAWFEEQLQSIGLSALNDSLYFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEK 257
             WF++++  IGL+ + ++LYFPQ + S L   +LP GTRS+ VQP+VQN     NE +K
Sbjct: 192 HDWFKKKVDEIGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQK 251

Query: 258 IGGFILLASSLSYAFSDKDRAWIKALASKF 283
           + GF+L+AS+  YA+SDKDRAWI A+A KF
Sbjct: 252 VNGFLLVASTAGYAYSDKDRAWIGAMAEKF 273

[Close]

BLAST of Lag0019988 vs. TAIR 10
Match: AT5G52110.2 (Protein of unknown function (DUF2930) )

HSP 1 Score: 306.2 bits (783), Expect = 2.7e-83
Identity = 156/270 (57.78%), Postives = 210/270 (77.78%), Query Frame = 0


Query: 18  PRFRAKSR-WKSAAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGF 77
           P+F  + R  +S  I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGF
Sbjct: 12  PKFALQPRAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGF 71

Query: 78  GSLLLLNHFVGSNSAASVTPAQLRTEALGISLAAFSISLPYLGKFLKGAVPSGEATLPEG 137
           GSLLLLNHF   +++A ++ +Q+R+EALG+SLAAFSI+LPY+GKFLKG+V   + +LPE 
Sbjct: 72  GSLLLLNHF---SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVE-QRSLPEE 131

Query: 138 AEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRGYWNSPNDISGADL 197
            EQ+FV+S N+ D++KEDLAWATY+LLRNT++I+VLI ++GELCVRGYWN P+ +S A L
Sbjct: 132 GEQVFVISSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQL 191

Query: 198 LAWFEEQLQSIGLSALNDSLYFPQISESEL-WQMLPKGTRSVLVQPVVQNLRRSGNEMEK 257
             WF++++  IGL+ + ++LYFPQ + S L   +LP GTRS+ VQP+VQN     NE +K
Sbjct: 192 HDWFKKKVDEIGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQK 251

Query: 258 IGGFILLASSLSYAFSDKDRAWIKALASKF 283
           + GF+L+AS+  YA+SDKDRAWI A+A KF
Sbjct: 252 VNGFLLVASTAGYAYSDKDRAWIGAMAEKF 273

The following BLAST results are available for this feature:

BLAST of Lag0019988 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141087.1	5.7e-139	89.24	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]
XP_023542853.1	6.2e-138	88.85	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita ...	[more]
XP_022945332.1	1.1e-137	88.50	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita ...	[more]
XP_022968395.1	1.8e-137	88.85	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 ...	[more]
XP_022968386.1	1.8e-137	88.85	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]

BLAST of Lag0019988 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ81	3.9e-82	57.78	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidop...	[more]

BLAST of Lag0019988 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJH9	2.7e-139	89.24	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]
A0A6J1G0N4	5.2e-138	88.50	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Cucurbit...	[more]
A0A6J1HXW3	8.8e-138	88.85	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]
A0A6J1HX31	8.8e-138	88.85	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 ...	[more]
A0A1S4DSW9	1.4e-135	87.50	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]

BLAST of Lag0019988 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52110.1	2.7e-83	57.78	Protein of unknown function (DUF2930)	[more]
AT5G52110.2	2.7e-83	57.78	Protein of unknown function (DUF2930)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021325	Cofactor assembly of complex C subunit B, CCB2/CCB4	PFAM	PF11152	CCB2_CCB4	coord: 65..282 e-value: 8.4E-59 score: 198.2
IPR044970	COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic	PANTHER	PTHR36403	PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, CHLOROPLASTIC	coord: 14..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0019988.1	Lag0019988.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly