Lag0019981 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019981
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptiontraB domain-containing protein
Locationchr5: 47153518 .. 47155438 (+)
RNA-Seq ExpressionLag0019981
SyntenyLag0019981
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATACTTTAGATACTGGTGAGCCAGACCAAAAACTGAAGTCGAACATGTTCTCCTTGAGTGGGAATGGTTTTTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGTAAGGAGACCAACATTTTGTTTGTTTGTTTGTTTGTTTTTCACATATAAGTTGTCTAAATTTTTCCCAATTATCAGGAGGCCAAACTGCTCTTGCTTTACGTCTGCTTTTAGCAGTTTTTTCGTCCAAAATTTCGTCTGATGTCAACCGTCCTTTTGGAGATGAGGTACTTGAAGAAACAGCTTTTCAAATACCAAGTAATTTCTAGAAAGTACTACTGTCTAGGTCTACATATCTACAGGCAGTTCATGAAACTCTCATCAATCATGTAGTTCCGAGCTGCTCGTAAAGCATCTGAAGAAGTTGGTGCTCAGATAGTTTTGGGGGACCGACCAATTGAGATAACTGTATGTATTTTCTCTTGCAAGATGAGACTGTTTTCTGTTTTGGCAAGTGCAAATGACTAGTAGAATTTGGCCTATTCAGATAATTTAATTTGGATGAGTACTATGAAAATATTCAATCCTTTCAATCACTTCCATATTATTTATTCATGCAGCTAGAAAGGGCATGGAATGCTCTGACATGGACCGAGAAGTTGAGCTTAGTAAGCTCAGTTGTTCGTGGAATAACATCGGAATCTGATTTTTCTCAAAACAATGATGAGGTTCTCTCCCACCTAAAATCTTGTATTGATTTGTTTGAATTCAAACCATGGATTCCTTGAGTTATTGGTCATCATGACCGATTGTTACTGAATAAGTTTTTTTAGTGTAATATGTTAGTGACCTCAAATTTATCAAGGAACTGTCTACTAGCAAAATTCTTTGTATAACTTCTCAGCTCAAAGCCTGTCAATGTTAAAGATTCAATGGTATATGTTTTAAAGTGATTCAGCCTTACTATGGATGCAAGATGAAAGGAAACTTCCTGCTTGAGACCATGTTTCCTAAGTTTCGGTTAGGCATAGGGCTACGAACTGAGTTAGAGGTGATCGTGGAAAATACTAGAATGACAGAATAAATATCGGAAGCGTCTAATCAGAATACAGATTGGCTACTTGCAAACCTTTCAAAGGTGTTCAGTCCAAACTAAACAGAACTCTGCATAGATAGACAGTTGATAGTTAAACATTTTTCCTCTGTTTTTTCGCAAACGTTTGTGTTTTTTCTATATGATAGCTTTCTTTTACTTATGACCTTGTTTATTAACACCTGAAAAACCATAAGCATATCAATTTCTCTTGAAGTTCAAATAGGTACATGTTATCATATCCTTAATGTGTGTCAAAAAGTTCTCAAGTTTCAAGATTTCACCTTTCTCACATATTTTTGAATGTGCTGTTCCAGGAATCAGGAGGAAATAATGGTAGTTCTTTGCAGCTCTATGAGCAACTCAGTTTTTGTTATCCATCCCTACTTCAACCTCTTATTCATGAACGAGATACTGTAAGTATAATCAGGATAATGCATTTGCAGCTCTTACTTCTTATCTCTATGTGTGTATGAAAGAAGAGTATCTCTCTTATCTGTGGTTGGTTCTGTTTTTCGTTTCGACGTTTACTGTTACAAAGTTCTTACCTAGCTGTGCATCGATCTTTAGTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAATGGTGTTGTTTATGCAATAATATCAGACCAAGGAAACTTGCGATTTCGAGACCTTGCAGGGAAGAGAGCTGGTGAAGGCTCCAATGGTTTTGTTAGCAGTCTCCTGCAGAGCTTGGTCAGAGACACAGTCATTGGTGTTGTCTTGTGGGTTTTATATGAACAATTGAAACAACTTCATATAGTATCTTAG

mRNA sequence

ATGTATACTTTAGATACTGGTGAGCCAGACCAAAAACTGAAGTCGAACATGTTCTCCTTGAGTGGGAATGGTTTTTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGAGGCCAAACTGCTCTTGCTTTACGTCTGCTTTTAGCAGTTTTTTCGTCCAAAATTTCGTCTGATGTCAACCGTCCTTTTGGAGATGAGTTCCGAGCTGCTCGTAAAGCATCTGAAGAAGTTGGTGCTCAGATAGTTTTGGGGGACCGACCAATTGAGATAACTCTAGAAAGGGCATGGAATGCTCTGACATGGACCGAGAAGTTGAGCTTAGTAAGCTCAGTTGTTCGTGGAATAACATCGGAATCTGATTTTTCTCAAAACAATGATGAGCCTTACTATGGATGCAAGATGAAAGGAAACTTCCTGCTTGAGACCATGTTTCCTAAGTTTCGGTTAGGCATAGGGCTACGAACTGAGTTAGAGGAATCAGGAGGAAATAATGGTAGTTCTTTGCAGCTCTATGAGCAACTCAGTTTTTGTTATCCATCCCTACTTCAACCTCTTATTCATGAACGAGATACTTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAATGGTGTTGTTTATGCAATAATATCAGACCAAGGAAACTTGCGATTTCGAGACCTTGCAGGGAAGAGAGCTGGTGAAGGCTCCAATGGTTTTGTTAGCAGTCTCCTGCAGAGCTTGGTCAGAGACACAGTCATTGGTGTTGTCTTGTGGGTTTTATATGAACAATTGAAACAACTTCATATAGTATCTTAG

Coding sequence (CDS)

ATGTATACTTTAGATACTGGTGAGCCAGACCAAAAACTGAAGTCGAACATGTTCTCCTTGAGTGGGAATGGTTTTTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGAGGCCAAACTGCTCTTGCTTTACGTCTGCTTTTAGCAGTTTTTTCGTCCAAAATTTCGTCTGATGTCAACCGTCCTTTTGGAGATGAGTTCCGAGCTGCTCGTAAAGCATCTGAAGAAGTTGGTGCTCAGATAGTTTTGGGGGACCGACCAATTGAGATAACTCTAGAAAGGGCATGGAATGCTCTGACATGGACCGAGAAGTTGAGCTTAGTAAGCTCAGTTGTTCGTGGAATAACATCGGAATCTGATTTTTCTCAAAACAATGATGAGCCTTACTATGGATGCAAGATGAAAGGAAACTTCCTGCTTGAGACCATGTTTCCTAAGTTTCGGTTAGGCATAGGGCTACGAACTGAGTTAGAGGAATCAGGAGGAAATAATGGTAGTTCTTTGCAGCTCTATGAGCAACTCAGTTTTTGTTATCCATCCCTACTTCAACCTCTTATTCATGAACGAGATACTTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAATGGTGTTGTTTATGCAATAATATCAGACCAAGGAAACTTGCGATTTCGAGACCTTGCAGGGAAGAGAGCTGGTGAAGGCTCCAATGGTTTTGTTAGCAGTCTCCTGCAGAGCTTGGTCAGAGACACAGTCATTGGTGTTGTCTTGTGGGTTTTATATGAACAATTGAAACAACTTCATATAGTATCTTAG

Protein sequence

MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDFSQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKRAGEGSNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIVS
Homology
[Close]
BLAST of Lag0019981 vs. NCBI nr
Match: XP_038876488.1 (traB domain-containing protein isoform X2 [Benincasa hispida])

HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-119
Identity = 236/281 (83.99%), Postives = 245/281 (87.19%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYTLDTGEPDQKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 153 MYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 212

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF
Sbjct: 213 PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 272

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQNND                               EESGG NGSSLQLYE+LSF YPSL
Sbjct: 273 SQNND-------------------------------EESGG-NGSSLQLYEKLSFSYPSL 332

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTYLAWSLKRSKAVNKSK VVGVIGRGHMNGV+YA+ISDQGNLRFRDLAGK+
Sbjct: 333 LQPLIHERDTYLAWSLKRSKAVNKSKGVVGVIGRGHMNGVIYALISDQGNLRFRDLAGKK 392

Query: 241 AGE-GSNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIVS 281
           AGE  SNGFVSSL++SLVRDT+IGVVLW+LYEQLKQLHIVS
Sbjct: 393 AGESNSNGFVSSLMRSLVRDTIIGVVLWILYEQLKQLHIVS 401

[Close]
BLAST of Lag0019981 vs. NCBI nr
Match: XP_038876484.1 (traB domain-containing protein isoform X1 [Benincasa hispida])

HSP 1 Score: 434.5 bits (1116), Expect = 7.0e-118
Identity = 236/285 (82.81%), Postives = 245/285 (85.96%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYTLDTGEPDQKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 153 MYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 212

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF
Sbjct: 213 PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 272

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQNND                               EESGG NGSSLQLYE+LSF YPSL
Sbjct: 273 SQNND-------------------------------EESGG-NGSSLQLYEKLSFSYPSL 332

Query: 181 LQPLIHERDT----YLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDL 240
           LQPLIHERDT    YLAWSLKRSKAVNKSK VVGVIGRGHMNGV+YA+ISDQGNLRFRDL
Sbjct: 333 LQPLIHERDTLHLQYLAWSLKRSKAVNKSKGVVGVIGRGHMNGVIYALISDQGNLRFRDL 392

Query: 241 AGKRAGE-GSNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIVS 281
           AGK+AGE  SNGFVSSL++SLVRDT+IGVVLW+LYEQLKQLHIVS
Sbjct: 393 AGKKAGESNSNGFVSSLMRSLVRDTIIGVVLWILYEQLKQLHIVS 405

[Close]
BLAST of Lag0019981 vs. NCBI nr
Match: XP_008439166.1 (PREDICTED: traB domain-containing protein [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 233/280 (83.21%), Postives = 242/280 (86.43%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYTLDTGEPDQKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 132 MYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 191

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSV+RGITS SDF
Sbjct: 192 PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVIRGITSGSDF 251

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQN D                               EES G NGSSLQLYE+LSF YPSL
Sbjct: 252 SQNID-------------------------------EESDG-NGSSLQLYEKLSFSYPSL 311

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGV+YAI SDQGNLRFRDLAGK+
Sbjct: 312 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAITSDQGNLRFRDLAGKK 371

Query: 241 AGEG-SNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIV 280
           AGEG SNGFVSSLL+SLVRDT+IGV+LWVLYEQLKQLHI+
Sbjct: 372 AGEGNSNGFVSSLLKSLVRDTIIGVILWVLYEQLKQLHII 379

[Close]
BLAST of Lag0019981 vs. NCBI nr
Match: XP_022140935.1 (traB domain-containing protein isoform X1 [Momordica charantia])

HSP 1 Score: 429.5 bits (1103), Expect = 2.2e-116
Identity = 233/280 (83.21%), Postives = 241/280 (86.07%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYT D GEPDQKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 132 MYTSDAGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 191

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEV AQIVLGDRPIEITLERAWNALT TEKLSLVSSVVRGITSES+F
Sbjct: 192 PFGDEFRAARKASEEVSAQIVLGDRPIEITLERAWNALTCTEKLSLVSSVVRGITSESNF 251

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQNND                             EL+ES G NGSSLQLYEQL F YPSL
Sbjct: 252 SQNND-----------------------------ELQES-GENGSSLQLYEQLGFSYPSL 311

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGK+
Sbjct: 312 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKK 371

Query: 241 AG-EGSNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIV 280
           AG +GSNGFVS L+QSLVRDTVIGVVLWV+YEQLKQLH+V
Sbjct: 372 AGDQGSNGFVSGLVQSLVRDTVIGVVLWVVYEQLKQLHVV 381

[Close]
BLAST of Lag0019981 vs. NCBI nr
Match: XP_022140936.1 (traB domain-containing protein isoform X2 [Momordica charantia])

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-115
Identity = 230/280 (82.14%), Postives = 237/280 (84.64%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYT D GEPDQKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 132 MYTSDAGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 191

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEV AQIVLGDRPIEITLERAWNALT TEKLSLVSSVVRGITSES+F
Sbjct: 192 PFGDEFRAARKASEEVSAQIVLGDRPIEITLERAWNALTCTEKLSLVSSVVRGITSESNF 251

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQNND                                E  G NGSSLQLYEQL F YPSL
Sbjct: 252 SQNND--------------------------------EESGENGSSLQLYEQLGFSYPSL 311

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGK+
Sbjct: 312 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKK 371

Query: 241 AG-EGSNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIV 280
           AG +GSNGFVS L+QSLVRDTVIGVVLWV+YEQLKQLH+V
Sbjct: 372 AGDQGSNGFVSGLVQSLVRDTVIGVVLWVVYEQLKQLHVV 379

[Close]
BLAST of Lag0019981 vs. ExPASy Swiss-Prot
Match: Q99JY4 (TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 54/204 (26.47%), Postives = 92/204 (45.10%), Query Frame = 0 

Query: 31  RSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAA-RKASEEVGAQIVLGDRPIEI 90
           +++   G  +  +++LL   S+ I+  +    G EFR A ++AS+    +  LGDRPI +
Sbjct: 135 QAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPV 194

Query: 91  TLERAWNALTWTEKLSLVSSVVRGITSESDFSQNNDEPYYGCKMKGNFLLETMFPKFRLG 150
           T +RA  AL++ +K+ L      G+   SD    +D     CK K   LLE         
Sbjct: 195 TFKRAIAALSFWQKVKL----AWGLCFLSDPISKDD--VERCKQKD--LLE--------- 254

Query: 151 IGLRTELEESGGNNGSSLQLYEQLSFCYPSLLQPLIHERDTYLAWSLKRS-------KAV 210
                             Q+  ++   +P L + ++ ERD YL + L+++       +A 
Sbjct: 255 ------------------QMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRAS 303

Query: 211 NKSKR------VVGVIGRGHMNGV 221
           +   R      VVGV+G GH+ G+
Sbjct: 315 DAEPRKCVPSVVVGVVGMGHVPGI 303

[Close]
BLAST of Lag0019981 vs. ExPASy Swiss-Prot
Match: Q9H4I3 (TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 54/204 (26.47%), Postives = 92/204 (45.10%), Query Frame = 0 

Query: 31  RSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAA-RKASEEVGAQIVLGDRPIEI 90
           +++   G  +  +++LL   S+ I+  +    G EFR A ++AS+    +  LGDRPI +
Sbjct: 136 QAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPV 195

Query: 91  TLERAWNALTWTEKLSLVSSVVRGITSESDFSQNNDEPYYGCKMKGNFLLETMFPKFRLG 150
           T +RA  AL++ +K+ L      G+   SD    +D     CK K   LLE         
Sbjct: 196 TFKRAIAALSFWQKVRL----AWGLCFLSDPISKDD--VERCKQKD--LLE--------- 255

Query: 151 IGLRTELEESGGNNGSSLQLYEQLSFCYPSLLQPLIHERDTYLAWSLKRS-------KAV 210
                             Q+  ++   +P L + ++ ERD YL + L+++       +A 
Sbjct: 256 ------------------QMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRAS 304

Query: 211 NKSKR------VVGVIGRGHMNGV 221
           +   R      VVGV+G GH+ G+
Sbjct: 316 DAEPRKCVPSVVVGVVGMGHVPGI 304

[Close]
BLAST of Lag0019981 vs. ExPASy Swiss-Prot
Match: Q58DF3 (TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 57/204 (27.94%), Postives = 90/204 (44.12%), Query Frame = 0 

Query: 31  RSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAA-RKASEEVGAQIVLGDRPIEI 90
           ++I   G  +  +++LL   S+ I+  +    G EFR A ++AS     +  LGDRPI +
Sbjct: 136 QAIRQNGVASGLMQMLLLKVSAHITEQLGVAPGGEFREAFKEASRVPFCKFHLGDRPIPV 195

Query: 91  TLERAWNALTWTEKLSLVSSVVRGITSESDFSQNNDEPYYGCKMKGNFLLETMFPKFRLG 150
           T +RA  AL+  +K+ L      G+   SD    +D     CK K   LLE M       
Sbjct: 196 TFKRAIAALSLWQKVKL----AWGLCFLSDPISKDD--VERCKQKD--LLEQM------- 255

Query: 151 IGLRTELEESGGNNGSSLQLYEQLSFCYPSLLQPLIHERDTYLAWSLKRS-------KAV 210
                 + E  G               +P L + ++ ERD YL + L+++       +A 
Sbjct: 256 ------MAEMVGE--------------FPDLHRTIVSERDVYLTYMLRQAARRLELPRAS 304

Query: 211 NKSKR------VVGVIGRGHMNGV 221
           +   R      VVGV+G GH+ G+
Sbjct: 316 DAEPRKCVPSVVVGVVGMGHVPGI 304

[Close]
BLAST of Lag0019981 vs. ExPASy TrEMBL
Match: A0A1S3AXQ2 (traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103484044 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 7.5e-118
Identity = 233/280 (83.21%), Postives = 242/280 (86.43%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYTLDTGEPDQKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 132 MYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 191

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSV+RGITS SDF
Sbjct: 192 PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVIRGITSGSDF 251

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQN D                               EES G NGSSLQLYE+LSF YPSL
Sbjct: 252 SQNID-------------------------------EESDG-NGSSLQLYEKLSFSYPSL 311

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGV+YAI SDQGNLRFRDLAGK+
Sbjct: 312 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAITSDQGNLRFRDLAGKK 371

Query: 241 AGEG-SNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIV 280
           AGEG SNGFVSSLL+SLVRDT+IGV+LWVLYEQLKQLHI+
Sbjct: 372 AGEGNSNGFVSSLLKSLVRDTIIGVILWVLYEQLKQLHII 379

[Close]
BLAST of Lag0019981 vs. ExPASy TrEMBL
Match: A0A6J1CGK3 (traB domain-containing protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011476 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 233/280 (83.21%), Postives = 241/280 (86.07%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYT D GEPDQKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 132 MYTSDAGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 191

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEV AQIVLGDRPIEITLERAWNALT TEKLSLVSSVVRGITSES+F
Sbjct: 192 PFGDEFRAARKASEEVSAQIVLGDRPIEITLERAWNALTCTEKLSLVSSVVRGITSESNF 251

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQNND                             EL+ES G NGSSLQLYEQL F YPSL
Sbjct: 252 SQNND-----------------------------ELQES-GENGSSLQLYEQLGFSYPSL 311

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGK+
Sbjct: 312 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKK 371

Query: 241 AG-EGSNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIV 280
           AG +GSNGFVS L+QSLVRDTVIGVVLWV+YEQLKQLH+V
Sbjct: 372 AGDQGSNGFVSGLVQSLVRDTVIGVVLWVVYEQLKQLHVV 381

[Close]
BLAST of Lag0019981 vs. ExPASy TrEMBL
Match: A0A6J1CHI0 (traB domain-containing protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011476 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.4e-116
Identity = 230/280 (82.14%), Postives = 237/280 (84.64%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYT D GEPDQKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 132 MYTSDAGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 191

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEV AQIVLGDRPIEITLERAWNALT TEKLSLVSSVVRGITSES+F
Sbjct: 192 PFGDEFRAARKASEEVSAQIVLGDRPIEITLERAWNALTCTEKLSLVSSVVRGITSESNF 251

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQNND                                E  G NGSSLQLYEQL F YPSL
Sbjct: 252 SQNND--------------------------------EESGENGSSLQLYEQLGFSYPSL 311

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGK+
Sbjct: 312 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKK 371

Query: 241 AG-EGSNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIV 280
           AG +GSNGFVS L+QSLVRDTVIGVVLWV+YEQLKQLH+V
Sbjct: 372 AGDQGSNGFVSGLVQSLVRDTVIGVVLWVVYEQLKQLHVV 379

[Close]
BLAST of Lag0019981 vs. ExPASy TrEMBL
Match: A0A0A0L5T2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180280 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.2e-115
Identity = 229/280 (81.79%), Postives = 239/280 (85.36%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYTLDTGEPDQKLKSNMFSLSG+GFLGAV RSINLGGQTALALRLLLAVFSSKISSDVNR
Sbjct: 36  MYTLDTGEPDQKLKSNMFSLSGDGFLGAVVRSINLGGQTALALRLLLAVFSSKISSDVNR 95

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNAL WTEKLSLVSSV+RGITSESDF
Sbjct: 96  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALIWTEKLSLVSSVIRGITSESDF 155

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQN D                               EES G NGSSLQLYE+L F YPSL
Sbjct: 156 SQNID-------------------------------EESDG-NGSSLQLYEKLGFSYPSL 215

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGV+YAI SDQGNLRFRDLAGK+
Sbjct: 216 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAITSDQGNLRFRDLAGKK 275

Query: 241 AGEG-SNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIV 280
           AGEG SNGFVSSLL+ LVRDT+IGV++WVLYEQLKQLHI+
Sbjct: 276 AGEGNSNGFVSSLLKDLVRDTIIGVIVWVLYEQLKQLHII 283

[Close]
BLAST of Lag0019981 vs. ExPASy TrEMBL
Match: A0A6J1HYE5 (traB domain-containing protein isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467392 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.6e-115
Identity = 223/279 (79.93%), Postives = 236/279 (84.59%), Query Frame = 0 

Query: 1   MYTLDTGEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVNR 60
           MYTL+TGEP QKLKSNMFSLSG+GFLGAVGRSINLGGQTALALRLLLA FSSKISSDVNR
Sbjct: 1   MYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNR 60

Query: 61  PFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDF 120
           PFG EFRAARKASEEVGAQIVLGDRPIEITLERAWNALTW EKLSLVSSV+RGITS+S+ 
Sbjct: 61  PFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNEKLSLVSSVIRGITSQSNV 120

Query: 121 SQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSL 180
           SQ+ND                                E  G +GSSLQLYEQLSF YPSL
Sbjct: 121 SQSND--------------------------------EEAGRDGSSLQLYEQLSFSYPSL 180

Query: 181 LQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGKR 240
           LQPLIHERDTY+AWSLKRSKAVNKSKRVVGVIGRGHMNGV+YAIISDQGNLRFRD+AGKR
Sbjct: 181 LQPLIHERDTYIAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAIISDQGNLRFRDVAGKR 240

Query: 241 AGEGSNGFVSSLLQSLVRDTVIGVVLWVLYEQLKQLHIV 280
           AGE SNGFVSSLLQSLVRDT+IGV+ WVLYEQLKQLH+V
Sbjct: 241 AGETSNGFVSSLLQSLVRDTIIGVLFWVLYEQLKQLHLV 247

[Close]
BLAST of Lag0019981 vs. TAIR 10
Match: AT5G52030.2 (TraB family protein )

HSP 1 Score: 312.4 bits (799), Expect = 3.7e-85
Identity = 171/279 (61.29%), Postives = 196/279 (70.25%), Query Frame = 0 

Query: 1   MYTLDT-GEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVN 60
           MYT    GE DQ LKS   SL+G GFLGAVGRS++LGGQTALALRLLLAVFSSK+SS  +
Sbjct: 145 MYTSSVGGEVDQNLKSGELSLTGTGFLGAVGRSLDLGGQTALALRLLLAVFSSKLSSVAD 204

Query: 61  RPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESD 120
           RPFGDEFRAARKASEEVGAQ+VLGDRPIEITL+RAWN+L W EK +LV +V R ITS S 
Sbjct: 205 RPFGDEFRAARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEKFNLVMAVTRVITSSS- 264

Query: 121 FSQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPS 180
                                        GI      E+    N  SLQLYE+LSF YP+
Sbjct: 265 -----------------------------GISAAELKEQETDENSGSLQLYERLSFSYPA 324

Query: 181 LLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGK 240
           LL PLIHERDTYLAWSLKRSKAVN  K VVGVIG+GHMNGV+YA++SD G+LRFRDL G+
Sbjct: 325 LLMPLIHERDTYLAWSLKRSKAVNGCKTVVGVIGKGHMNGVIYALVSDSGDLRFRDLVGR 384

Query: 241 ------RAGEGSNGFVSSLLQSLVRDTVIGVVLWVLYEQ 273
                   G  SNG++  +L+S VRDT+IG +LW LYEQ
Sbjct: 385 GDSYNGGTGTTSNGWIQKVLKSFVRDTIIGFLLWELYEQ 393

[Close]
BLAST of Lag0019981 vs. TAIR 10
Match: AT5G52030.1 (TraB family protein )

HSP 1 Score: 312.4 bits (799), Expect = 3.7e-85
Identity = 171/279 (61.29%), Postives = 196/279 (70.25%), Query Frame = 0 

Query: 1   MYTLDT-GEPDQKLKSNMFSLSGNGFLGAVGRSINLGGQTALALRLLLAVFSSKISSDVN 60
           MYT    GE DQ LKS   SL+G GFLGAVGRS++LGGQTALALRLLLAVFSSK+SS  +
Sbjct: 1   MYTSSVGGEVDQNLKSGELSLTGTGFLGAVGRSLDLGGQTALALRLLLAVFSSKLSSVAD 60

Query: 61  RPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESD 120
           RPFGDEFRAARKASEEVGAQ+VLGDRPIEITL+RAWN+L W EK +LV +V R ITS S 
Sbjct: 61  RPFGDEFRAARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEKFNLVMAVTRVITSSS- 120

Query: 121 FSQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPS 180
                                        GI      E+    N  SLQLYE+LSF YP+
Sbjct: 121 -----------------------------GISAAELKEQETDENSGSLQLYERLSFSYPA 180

Query: 181 LLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVVYAIISDQGNLRFRDLAGK 240
           LL PLIHERDTYLAWSLKRSKAVN  K VVGVIG+GHMNGV+YA++SD G+LRFRDL G+
Sbjct: 181 LLMPLIHERDTYLAWSLKRSKAVNGCKTVVGVIGKGHMNGVIYALVSDSGDLRFRDLVGR 240

Query: 241 ------RAGEGSNGFVSSLLQSLVRDTVIGVVLWVLYEQ 273
                   G  SNG++  +L+S VRDT+IG +LW LYEQ
Sbjct: 241 GDSYNGGTGTTSNGWIQKVLKSFVRDTIIGFLLWELYEQ 249

[Close]
BLAST of Lag0019981 vs. TAIR 10
Match: AT2G32340.1 (TraB family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-13
Identity = 50/158 (31.65%), Postives = 83/158 (52.53%), Query Frame = 0 

Query: 63  GDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVVRGITSESDFSQ 122
           G EFR   + + + G ++ LGDR ++ITL+R W  +    K+ LV S+V    S++ F  
Sbjct: 186 GAEFRVGFEEANKYGGRVFLGDRSVQITLQRTWGKMPLWHKIKLVYSIV----SQAVFLP 245

Query: 123 NNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNGSSLQLYEQLSFCYPSLLQ 182
           N  E            LE M             L++ G  +  +L + +++S  +P+L++
Sbjct: 246 NPKE------------LEKM-------------LKDLGDGDMLTLAI-QEMSTEFPTLME 305

Query: 183 PLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGV 221
            L+HERD Y+A+ L R  + + S  VV V+GRGH+ G+
Sbjct: 306 TLVHERDKYMAYQLLRIASEHSS--VVAVVGRGHLQGI 311

[Close]
BLAST of Lag0019981 vs. TAIR 10
Match: AT1G05270.1 (TraB family protein )

HSP 1 Score: 72.4 bits (176), Expect = 6.5e-13
Identity = 50/176 (28.41%), Postives = 86/176 (48.86%), Query Frame = 0 

Query: 45  LLLAVFSSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKL 104
           +L   F +KI+S +    G EFR A + + + G +++LGDRP++ITL+R W  +    K+
Sbjct: 177 ILYGWFLAKIASHLEVFPGAEFRVAYEEAIKYGGKVILGDRPVQITLKRTWAKMPLWHKV 236

Query: 105 SLVSSVVRGITSESDFSQNNDEPYYGCKMKGNFLLETMFPKFRLGIGLRTELEESGGNNG 164
             + S++                +    + G   LE M               +   N  
Sbjct: 237 KFLYSIL----------------FQAVFLPGAEELEKML--------------KDMDNVD 296

Query: 165 SSLQLYEQLSFCYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGV 221
               + +++S  +P+L+  ++HERD Y+A SL R  + + S  VV VIG+GH+NG+
Sbjct: 297 MVTLVIQEMSKEFPTLMDTIVHERDQYMASSLLRVASDHSS--VVAVIGKGHINGI 320

The following BLAST results are available for this feature:
BLAST of Lag0019981 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876488.11.3e-11983.99traB domain-containing protein isoform X2 [Benincasa hispida][more]
XP_038876484.17.0e-11882.81traB domain-containing protein isoform X1 [Benincasa hispida][more]
XP_008439166.11.6e-11783.21PREDICTED: traB domain-containing protein [Cucumis melo][more]
XP_022140935.12.2e-11683.21traB domain-containing protein isoform X1 [Momordica charantia][more]
XP_022140936.11.1e-11582.14traB domain-containing protein isoform X2 [Momordica charantia][more]
BLAST of Lag0019981 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q99JY41.3e-0526.47TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1[more]
Q9H4I31.7e-0526.47TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1[more]
Q58DF32.2e-0527.94TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1[more]
BLAST of Lag0019981 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AXQ27.5e-11883.21traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103484044 PE=4 SV=1[more]
A0A6J1CGK31.1e-11683.21traB domain-containing protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1CHI05.4e-11682.14traB domain-containing protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A0A0L5T21.2e-11581.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180280 PE=4 SV=1[more]
A0A6J1HYE54.6e-11579.93traB domain-containing protein isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
BLAST of Lag0019981 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52030.23.7e-8561.29TraB family protein [more]
AT5G52030.13.7e-8561.29TraB family protein [more]
AT2G32340.11.0e-1331.65TraB family protein [more]
AT1G05270.16.5e-1328.41TraB family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002816TraB/PrgY/GumN familyPFAMPF01963TraBcoord: 56..220
e-value: 4.4E-12
score: 46.4
NoneNo IPR availablePANTHERPTHR21530:SF0TRAB DOMAIN-CONTAINING PROTEINcoord: 11..274
NoneNo IPR availablePANTHERPTHR21530PHEROMONE SHUTDOWN PROTEINcoord: 11..274
NoneNo IPR availableCDDcd14726TraB_PrgY-likecoord: 50..221
e-value: 9.38486E-30
score: 108.814

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019981.1Lag0019981.1mRNA