Lag0019938 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019938
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionzinc finger A20 and AN1 domain-containing stress-associated protein 6-like
Locationchr5: 46843445 .. 46843939 (-)
RNA-Seq ExpressionLag0019938
SyntenyLag0019938
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGTTCCGGAAGTTCAGAGAATGGAAGCGATCCACCACTCTGCGCCAATGACTGTGGCTTCTTTGGAAATCCGGAGACTCGCAACTTGTGTTCCGTCTGCTACACTGCTTTTCTCAAAGAAAACCTGATTTCGATCTCAACGAAAACCGATGAAGATTCTCAACGCCGACAGGACGTCGACGGTTTGCTCAAATCGGAGGACCTCTACTCGGATTTCGAGAGACTTAAAGTTTCAGAAACGAATGCGGTGACGAATCCGTCTTGTTCGGAATCCGATTCGAAAGCGCCGGCCAGAAGAAATAGGTGCGGGCTCTGCAACAAGAAGGTCGGATTGTTAGGGTTTACGTGCCGGTGCGGTGGTTTGTTTTGCGGCAAACATAGATTTCAGGAAGAACATGGATGCAACTTCGATATGAAGAAGGTCGAACGAGAGAGATTGGCGAAACAGAACTTAGAAATCAAGGGGGAGAAGCTTGAAAACAGAGTTTAG

mRNA sequence

ATGGCTGGTTCCGGAAGTTCAGAGAATGGAAGCGATCCACCACTCTGCGCCAATGACTGTGGCTTCTTTGGAAATCCGGAGACTCGCAACTTGTGTTCCGTCTGCTACACTGCTTTTCTCAAAGAAAACCTGATTTCGATCTCAACGAAAACCGATGAAGATTCTCAACGCCGACAGGACGTCGACGGTTTGCTCAAATCGGAGGACCTCTACTCGGATTTCGAGAGACTTAAAGTTTCAGAAACGAATGCGGTGACGAATCCGTCTTGTTCGGAATCCGATTCGAAAGCGCCGGCCAGAAGAAATAGGTGCGGGCTCTGCAACAAGAAGGTCGGATTGTTAGGGTTTACGTGCCGGTGCGGTGGTTTGTTTTGCGGCAAACATAGATTTCAGGAAGAACATGGATGCAACTTCGATATGAAGAAGGTCGAACGAGAGAGATTGGCGAAACAGAACTTAGAAATCAAGGGGGAGAAGCTTGAAAACAGAGTTTAG

Coding sequence (CDS)

ATGGCTGGTTCCGGAAGTTCAGAGAATGGAAGCGATCCACCACTCTGCGCCAATGACTGTGGCTTCTTTGGAAATCCGGAGACTCGCAACTTGTGTTCCGTCTGCTACACTGCTTTTCTCAAAGAAAACCTGATTTCGATCTCAACGAAAACCGATGAAGATTCTCAACGCCGACAGGACGTCGACGGTTTGCTCAAATCGGAGGACCTCTACTCGGATTTCGAGAGACTTAAAGTTTCAGAAACGAATGCGGTGACGAATCCGTCTTGTTCGGAATCCGATTCGAAAGCGCCGGCCAGAAGAAATAGGTGCGGGCTCTGCAACAAGAAGGTCGGATTGTTAGGGTTTACGTGCCGGTGCGGTGGTTTGTTTTGCGGCAAACATAGATTTCAGGAAGAACATGGATGCAACTTCGATATGAAGAAGGTCGAACGAGAGAGATTGGCGAAACAGAACTTAGAAATCAAGGGGGAGAAGCTTGAAAACAGAGTTTAG

Protein sequence

MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQDVDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRCGGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV
Homology
BLAST of Lag0019938 vs. NCBI nr
Match: XP_023542516.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.5 bits (628), Expect = 1.6e-61
Identity = 120/164 (73.17%), Postives = 137/164 (83.54%), Query Frame = 0

Query: 1   MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
           MAG GSSEN +D PLCAN+CGFFGNP+TRNLCS+CY AFLKENLISI TK DE +QRRQD
Sbjct: 1   MAGFGSSENSNDSPLCANNCGFFGNPKTRNLCSICYAAFLKENLISIPTKPDEVAQRRQD 60

Query: 61  VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
            D  LK     SD E ++VSE+    NPSCSE+DSKAPAR+NRCGLCNKKVGLLGF+CRC
Sbjct: 61  SDDSLK-----SDLESIEVSESETAMNPSCSETDSKAPARKNRCGLCNKKVGLLGFSCRC 120

Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
           GGLFC  HRF+++HGCNFDMK VERERL +Q +EIKG+KLE RV
Sbjct: 121 GGLFCRMHRFEDKHGCNFDMKTVERERLGRQMIEIKGDKLEYRV 159

BLAST of Lag0019938 vs. NCBI nr
Match: KAG7013187.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.3 bits (617), Expect = 3.0e-60
Identity = 118/164 (71.95%), Postives = 135/164 (82.32%), Query Frame = 0

Query: 1   MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
           MAG GSSEN +D PLCAN+CGFFGNP+TRNLCS+CY AFLKENLISI TK DE +QRRQD
Sbjct: 1   MAGFGSSENSNDSPLCANNCGFFGNPKTRNLCSICYAAFLKENLISIPTKPDEVAQRRQD 60

Query: 61  VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
            D  LK     SD E ++VSE+    NPSC E+DSKAPAR+NRCGLCNKKVGLLGF+CRC
Sbjct: 61  SDDSLK-----SDLESIEVSESETAMNPSCPETDSKAPARKNRCGLCNKKVGLLGFSCRC 120

Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
           GGLFC  HRF+++HGCNFD K VERERL +Q +EIKG+KLE RV
Sbjct: 121 GGLFCRMHRFEDKHGCNFDTKTVERERLGRQMIEIKGDKLEYRV 159

BLAST of Lag0019938 vs. NCBI nr
Match: KAG6574126.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.9 bits (616), Expect = 3.9e-60
Identity = 118/164 (71.95%), Postives = 135/164 (82.32%), Query Frame = 0

Query: 1   MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
           MAG GSSEN +D PLCAN+CGFFGNP+TRNLCS+CY AFLKENLISI TK DE +QRRQD
Sbjct: 1   MAGFGSSENSNDSPLCANNCGFFGNPKTRNLCSICYAAFLKENLISIPTKPDEVAQRRQD 60

Query: 61  VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
            D  LK     SD E ++VSE+    NPSC E+DSKAPAR+NRCGLCNKKVGLLGF+CRC
Sbjct: 61  SDDSLK-----SDLESIEVSESETAMNPSCPETDSKAPARKNRCGLCNKKVGLLGFSCRC 120

Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
           GGLFC  HRF+++HGCNFD K VERERL +Q +EIKG+KLE RV
Sbjct: 121 GGLFCCMHRFEDKHGCNFDTKTVERERLGRQMIEIKGDKLEYRV 159

BLAST of Lag0019938 vs. NCBI nr
Match: XP_022968365.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59
Identity = 118/164 (71.95%), Postives = 133/164 (81.10%), Query Frame = 0

Query: 1   MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
           MAG GSSEN  D PLCAN+CGFFGNP+TRNLCS+CYT FLKENLISI T+TD  SQRRQD
Sbjct: 40  MAGFGSSENPDDSPLCANNCGFFGNPKTRNLCSICYTDFLKENLISIPTETDGVSQRRQD 99

Query: 61  VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
            D  LK     SD E ++VSE+    NPSCSE+DS APAR+NRCGLCNKKVGLLGF CRC
Sbjct: 100 FDDSLK-----SDLESIEVSESEVAMNPSCSETDSNAPARKNRCGLCNKKVGLLGFPCRC 159

Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
           GGLFC  HRF+++HGCNFD K VERERL +Q +EIKG+KLE RV
Sbjct: 160 GGLFCRMHRFEDKHGCNFDTKTVERERLGRQMIEIKGDKLEYRV 198

BLAST of Lag0019938 vs. NCBI nr
Match: XP_022945957.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucurbita moschata])

HSP 1 Score: 238.8 bits (608), Expect = 3.3e-59
Identity = 116/164 (70.73%), Postives = 134/164 (81.71%), Query Frame = 0

Query: 1   MAGSGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQD 60
           MAG G SEN +D PLCAN+CGFFGNP+TRNLCS+CY AFLKENLISI TK DE +QRRQD
Sbjct: 1   MAGFGGSENSNDSPLCANNCGFFGNPKTRNLCSICYAAFLKENLISIPTKPDEVAQRRQD 60

Query: 61  VDGLLKSEDLYSDFERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRC 120
            D  LK     SD E ++VSE+    NPSC E+DSKAPAR+NRCGLCNKKVGLLGF+CRC
Sbjct: 61  SDDSLK-----SDLESIEVSESETAMNPSCPETDSKAPARKNRCGLCNKKVGLLGFSCRC 120

Query: 121 GGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
           GGLFC  HRF+++HGC+FD K VERERL +Q +EIKG+KLE RV
Sbjct: 121 GGLFCRMHRFEDKHGCHFDTKTVERERLGRQMIEIKGDKLEYRV 159

BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match: Q5JN07 (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP3 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24
Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 0

Query: 4   SGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDED---SQRRQD 63
           S    +   P LCA+ CGF+GNP T ++CSVCY      N  +++T        +     
Sbjct: 193 SEQQASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATV 252

Query: 64  VDGLLKSEDLYSDFERLKVSETNAVTNPS-CSESDSKAPARRNRCGLCNKKVGLLGFTCR 123
             G + S+        +  +  ++  NP   +  + KAPA  NRC  C KKVGLLGF CR
Sbjct: 253 ATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPA--NRCASCKKKVGLLGFACR 312

Query: 124 CGGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLENRV 165
           CG  +CG HR+ E+H C FD K   R+ +A+ N  IKGEKL N++
Sbjct: 313 CGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKLTNKI 355

BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match: Q9SZ69 (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana OX=3702 GN=SAP7 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23
Identity = 61/172 (35.47%), Postives = 92/172 (53.49%), Query Frame = 0

Query: 5   GSSENGS------DPPLCANDCGFFGNPETRNLCSVCYTAF-LKENLISISTKTDEDSQR 64
           GS EN S      +P LC N CGFFG+P   NLCS CY +   +E+  +++    ++S +
Sbjct: 2   GSEENNSTSFPPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLK 61

Query: 65  RQDVDGLLKSEDLYSDFERLKVSETNAVTNPS----CSESDSKAPAR----RNRCGLCNK 124
                 +   +    + +   +        PS     +E D   P+R     NRC  CNK
Sbjct: 62  LPSCSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNK 121

Query: 125 KVGLLGFTCRCGGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLE 162
           KVG++GF C+CG  FCG HR+ E+H C+FD K+V R+ +AK N  +K +K++
Sbjct: 122 KVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173

BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match: Q6Z541 (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP12 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.8e-23
Identity = 59/146 (40.41%), Postives = 81/146 (55.48%), Query Frame = 0

Query: 15  LCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQDVDGLLKSEDLYSDF 74
           LC++ CGFFG+ ET N+CS CY   LK      S+ +   +    D+   + +    +  
Sbjct: 80  LCSSGCGFFGSKETNNMCSKCYRDHLKATSPLFSSSSSPATASTTDITVPI-APATTAPT 139

Query: 75  ERLKVSETNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRCGGLFCGKHRFQEEH 134
             LK  E  A    + + S + A A+ NRC  C KKVGLLGF CRCGG FC  HR  ++H
Sbjct: 140 PSLKGKEEEAT---AAASSSAAAAAKPNRCVACRKKVGLLGFECRCGGTFCSTHRHADKH 199

Query: 135 GCNFDMKKVERERLAKQNLEIKGEKL 161
            C FD KK +RE++AK+N  I   K+
Sbjct: 200 ACTFDFKKSDREKIAKENPLIVAPKI 221

BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match: O49663 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana OX=3702 GN=SAP9 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.3e-22
Identity = 60/165 (36.36%), Postives = 87/165 (52.73%), Query Frame = 0

Query: 4   SGSSENGSDPPLCANDCGFFGNPETRNLCSVCYTAFLKENL-ISISTKTDEDSQRRQDVD 63
           S +    S+P LC   CGFFG+P   +LCS CY     E    +++    E S +     
Sbjct: 10  SFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPR 69

Query: 64  GLLKSED--LYSDFERLKVSETNAVTNPSCS----ESDSKAPARRNRCGLCNKKVGLLGF 123
            L  +E   +  + +  K +       PS S     ++   PAR NRC  CNKKVG++GF
Sbjct: 70  SLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGF 129

Query: 124 TCRCGGLFCGKHRFQEEHGCNFDMKKVERERLAKQNLEIKGEKLE 162
            C+CG  FCG+HR+ E H C+FD K+V R  +AK N  +K +K++
Sbjct: 130 KCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQ 174

BLAST of Lag0019938 vs. ExPASy Swiss-Prot
Match: Q7Y1W9 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP9 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21
Identity = 59/150 (39.33%), Postives = 80/150 (53.33%), Query Frame = 0

Query: 13  PPLCANDCGFFGNPETRNLCSVCYTAFLKENLISISTKTDEDSQRRQDVDGLLKSEDLYS 72
           P LC N+CGFFG+  T N+CS CY  F+K     ++T      +++        +    +
Sbjct: 20  PILCVNNCGFFGSSMTNNMCSKCYRDFVK-----VTTMAAPVVEKK----AFTPASSSKT 79

Query: 73  DFERLKVSE--TNAVTNPSCSESDSKAPARRNRCGLCNKKVGLLGFTCRCGGLFCGKHRF 132
             E  K  E    AV +   ++   K P+  NRC  C KKVGL GF CRCGG FC  HR+
Sbjct: 80  PLEPAKPDEVPAAAVEDKQAAQEPPKPPS--NRCLSCRKKVGLTGFQCRCGGTFCSTHRY 139

Query: 133 QEEHGCNFDMKKVERERLAKQNLEIKGEKL 161
            E H C FD KK  R+++AKQN  +  EK+
Sbjct: 140 TEAHDCTFDYKKAGRDQIAKQNPVVIAEKI 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023542516.11.6e-6173.17zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucu... [more]
KAG7013187.13.0e-6071.95Zinc finger A20 and AN1 domain-containing stress-associated protein 6, partial [... [more]
KAG6574126.13.9e-6071.95Zinc finger A20 and AN1 domain-containing stress-associated protein 6, partial [... [more]
XP_022968365.11.9e-5971.95zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucu... [more]
XP_022945957.13.3e-5970.73zinc finger A20 and AN1 domain-containing stress-associated protein 6-like [Cucu... [more]
Match NameE-valueIdentityDescription
Q5JN072.1e-2438.18Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza s... [more]
Q9SZ695.2e-2335.47Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabido... [more]
Q6Z5418.8e-2340.41Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza ... [more]
O496633.3e-2236.36Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabido... [more]
Q7Y1W91.7e-2139.33Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza s... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..164
NoneNo IPR availableGENE3D1.20.5.4770coord: 4..60
e-value: 4.3E-16
score: 60.3
NoneNo IPR availablePANTHERPTHR10634:SF124ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATEDcoord: 12..164
NoneNo IPR availablePANTHERPTHR10634AN1-TYPE ZINC FINGER PROTEINcoord: 12..164
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 15..43
IPR002653Zinc finger, A20-typeSMARTSM00259A20_3coord: 13..37
e-value: 3.2E-7
score: 40.0
IPR002653Zinc finger, A20-typePFAMPF01754zf-A20coord: 15..36
e-value: 3.1E-11
score: 43.0
IPR002653Zinc finger, A20-typePROSITEPS51036ZF_A20coord: 10..44
score: 9.516125
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 104..141
e-value: 7.1E-13
score: 58.8
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 104..139
e-value: 1.5E-10
score: 41.1
IPR000058Zinc finger, AN1-typePROSITEPS51039ZF_AN1coord: 101..144
score: 11.882815
IPR035896AN1-like Zinc fingerGENE3D4.10.1110.10coord: 78..158
e-value: 6.8E-25
score: 88.8
IPR035896AN1-like Zinc fingerSUPERFAMILY118310AN1-like Zinc fingercoord: 91..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019938.1Lag0019938.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding