Lag0019900 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGCGATAGGTTTCTGATTATCTATCCCATTTCAAGGCCTTTCAACGCAGGAAGGGTGGAGCTGTTGGGAGGGGGTGATTCTGAATCTAAGGTTTGGAACCCACCTGCGTTTCCTAATTACAAATTAAATACAGATGTGGCAGTGAACAAGAATCTCAATCGCAGCAGTATTGGTGCAGTTGTCAGAAACAAAAGAGGGGAAGTGATGCTTACCTCCGAGAGGTTGGTTGATTTTGTGATTGATGTGGAGGTATTGGAGGCGATGGAGGTTCGCGAAGGACTGGTTGCAGTGGTTGAAGCTGGCTTCTCGCAGGTGATGGCAGAATCAGATTCGGCAAGTGTGGTGAAGCAGATCAGTTCGACGCAGAGAAACCTCTCGGAGATGGGTTTTCTGGTTGAGGAAATTAGGAGCATTGCCAGCAGGTTGAGGTTTTGCTCGATCGGCTGGTGCTGTCGAGCTAGAAATAAGCTAGCGCACGAGGTAGCAAGGACAGCGTTAAGGCAGCAGCTGGAAGGAACTTGGCTGGAGGAGGTGTCGTTGGCTGTCGAAGGTTGCTACTTGGCTGAGTTGAGGAGCGCTGATGCGGATTCTAGGGCTTTATGTAATGAGTTTTAG ATGAATGGCGATAGGTTTCTGATTATCTATCCCATTTCAAGGCCTTTCAACGCAGGAAGGGTGGAGCTGTTGGGAGGGGGTGATTCTGAATCTAAGGTTTGGAACCCACCTGCGTTTCCTAATTACAAATTAAATACAGATGTGGCAGTGAACAAGAATCTCAATCGCAGCAGTATTGGTGCAGTTGTCAGAAACAAAAGAGGGGAAGTGATGCTTACCTCCGAGAGGTTGGTTGATTTTGTGATTGATGTGGAGGTATTGGAGGCGATGGAGGTTCGCGAAGGACTGGTTGCAGTGGTTGAAGCTGGCTTCTCGCAGGTGATGGCAGAATCAGATTCGGCAAGTGTGGTGAAGCAGATCAGTTCGACGCAGAGAAACCTCTCGGAGATGGGTTTTCTGGTTGAGGAAATTAGGAGCATTGCCAGCAGGTTGAGGTTTTGCTCGATCGGCTGGTGCTGTCGAGCTAGAAATAAGCTAGCGCACGAGGTAGCAAGGACAGCGTTAAGGCAGCAGCTGGAAGGAACTTGGCTGGAGGAGGTGTCGTTGGCTGTCGAAGGTTGCTACTTGGCTGAGTTGAGGAGCGCTGATGCGGATTCTAGGGCTTTATGTAATGAGTTTTAG ATGAATGGCGATAGGTTTCTGATTATCTATCCCATTTCAAGGCCTTTCAACGCAGGAAGGGTGGAGCTGTTGGGAGGGGGTGATTCTGAATCTAAGGTTTGGAACCCACCTGCGTTTCCTAATTACAAATTAAATACAGATGTGGCAGTGAACAAGAATCTCAATCGCAGCAGTATTGGTGCAGTTGTCAGAAACAAAAGAGGGGAAGTGATGCTTACCTCCGAGAGGTTGGTTGATTTTGTGATTGATGTGGAGGTATTGGAGGCGATGGAGGTTCGCGAAGGACTGGTTGCAGTGGTTGAAGCTGGCTTCTCGCAGGTGATGGCAGAATCAGATTCGGCAAGTGTGGTGAAGCAGATCAGTTCGACGCAGAGAAACCTCTCGGAGATGGGTTTTCTGGTTGAGGAAATTAGGAGCATTGCCAGCAGGTTGAGGTTTTGCTCGATCGGCTGGTGCTGTCGAGCTAGAAATAAGCTAGCGCACGAGGTAGCAAGGACAGCGTTAAGGCAGCAGCTGGAAGGAACTTGGCTGGAGGAGGTGTCGTTGGCTGTCGAAGGTTGCTACTTGGCTGAGTTGAGGAGCGCTGATGCGGATTCTAGGGCTTTATGTAATGAGTTTTAG MNGDRFLIIYPISRPFNAGRVELLGGGDSESKVWNPPAFPNYKLNTDVAVNKNLNRSSIGAVVRNKRGEVMLTSERLVDFVIDVEVLEAMEVREGLVAVVEAGFSQVMAESDSASVVKQISSTQRNLSEMGFLVEEIRSIASRLRFCSIGWCCRARNKLAHEVARTALRQQLEGTWLEEVSLAVEGCYLAELRSADADSRALCNEF Homology
BLAST of Lag0019900 vs. NCBI nr
Match: XP_030963892.1 (uncharacterized protein LOC115985062 [Quercus lobata]) HSP 1 Score: 99.0 bits (245), Expect = 5.1e-17 Identity = 58/177 (32.77%), Postives = 96/177 (54.24%), Query Frame = 0
BLAST of Lag0019900 vs. NCBI nr
Match: GAV89685.1 (RVT_3 domain-containing protein, partial [Cephalotus follicularis]) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-16 Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 0
BLAST of Lag0019900 vs. NCBI nr
Match: XP_023876296.1 (uncharacterized protein LOC111988743 [Quercus suber]) HSP 1 Score: 96.3 bits (238), Expect = 3.3e-16 Identity = 55/149 (36.91%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of Lag0019900 vs. NCBI nr
Match: XP_023904177.1 (uncharacterized protein LOC112015942 [Quercus suber]) HSP 1 Score: 96.3 bits (238), Expect = 3.3e-16 Identity = 55/158 (34.81%), Postives = 93/158 (58.86%), Query Frame = 0
BLAST of Lag0019900 vs. NCBI nr
Match: XP_030963999.1 (uncharacterized protein LOC115985177 [Quercus lobata]) HSP 1 Score: 95.1 bits (235), Expect = 7.4e-16 Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 0
BLAST of Lag0019900 vs. ExPASy TrEMBL
Match: A0A1Q3DB78 (RVT_3 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33099 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.5e-17 Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 0
BLAST of Lag0019900 vs. ExPASy TrEMBL
Match: A0A2N9HRK6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42141 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.5e-14 Identity = 53/163 (32.52%), Postives = 86/163 (52.76%), Query Frame = 0
BLAST of Lag0019900 vs. ExPASy TrEMBL
Match: A0A7N2LST3 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.5e-14 Identity = 56/153 (36.60%), Postives = 84/153 (54.90%), Query Frame = 0
BLAST of Lag0019900 vs. ExPASy TrEMBL
Match: A0A7N2RFA1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 7.5e-14 Identity = 55/162 (33.95%), Postives = 85/162 (52.47%), Query Frame = 0
BLAST of Lag0019900 vs. ExPASy TrEMBL
Match: A0A1Q3CFW0 (RVT_3 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22463 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.3e-13 Identity = 49/137 (35.77%), Postives = 81/137 (59.12%), Query Frame = 0
BLAST of Lag0019900 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 4.8e-05 Identity = 37/135 (27.41%), Postives = 65/135 (48.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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