Lag0019782 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTTGTCGTTGAAAGCGGCGGCGGCGGCGGTGCTTGTGGCTGTTGCCTTTGTTGCTCAGCTGCAGGCGGCGAGGTTTGGGGCGGAGGAGAATGAATTTGACTACTTTGTGTTATCGCTGCAATGGTCAGGCACTTCCTGCAGAAGCAATAGCGTGTGTTGCCCAGAAAGTGGCTGCTGCGCTGGGTGAGATCAGATCACTTCTATGTTTTTTTTAATGACTTTTACGGTGTGTTTTATTTCGAAAAAAAAAATCATTTTGAATTAAAATGACTTATTAGAAAATGAGATTGATGAATAAATCATTTTGAGACAAACACTTGAAACCAACTTCTTTAAAAGATTTTTTAAGTATATAATAGCTTGTGTATAAAAACACTCGTGAGGAAATATAACCAAACATATGGGTGTTTAAATTCTAAACAATTTTTATACAAAATGTTTTTAAAAAAAATGCATTCTTGAAAAACATTTAAATTGGAATGCATTCCAAACGGACCCTAGTTGTTGTTGGTTTTTCGTTTTTTTTTTCTTTTTCATGTTGTGTTGTGCTAATTAAGATTTTTGTGTGTTTATTCTTTCTCTAGAGCTGACACTCCGACTCAATTTACAATTCGTAAGTGTGAAAAAATCTGAGCTCCCTTAGCTTTGGATTTTGCTTTTCATTTGGATGCATTGTTAAATAAATTGATGACCAAAATTTGGCTGCATATCTGTATGTAGAAATCTTCCTATTTACTACATTAAAATCTTGACAATTAAGAAAGAGGAAAGGAGAAAATGAGAAAACTTTTTTATCTCTCCTAGTTGTCAAAATTTTAATGGTGATATCCAGAGAGATTCCTATGTCATGGAGCCAAAAATTTTCCTAAATTGAGTTTAAATCATCTAAGAGTTTTTTCTTCATTGGTGCAGATGGGCTGTGGCCTGTGAAAGAATGGGGTAAAAATCCTGAATGTTGTACTGATGCCGTATATAATGAAACTGAGGTCTCTCTCTCAAATTTAATGATGCAACCACTTGAAAACTATGCTAAAAAGGGGTTTAAAGTGTTAAAAAAATTCATCATTTTTAAGCGAAAACCTATTTGACACAAACCTATGAAAGTCGAGGAACTATTATACACAAAATTGAAACATTAAAAAGACTTTGTTAACTAAACCTTCTTAAAGTATATGGATATATGGACTAGATAAATCAAATCTTAAAAAAGTTTATCAACTTAGCTATAAATTTAAAATTTTAGGAGACAAACATGTAATCTATTAACCTAAAAAGTTAAGAATACTCTAAAGTACATTAAAAGATTAGGGAAAAATACATTGTTGGTCCCTGAAGTTTGGGTAAGGTTTCAATTTTGGTTCGTAAGTTTTCAAACTCGACATTATAACCCTTGAGGTTTGGATTCTGTTACATTATTGGTCTCCCCGTCCAATTTTCTGTTAAATCCTAACAGATTACTGACGTGACACCATTTTTTATTAAAAAAATATATTTTTTTATAATTTTTAAAAATAAAATATATTAAAATAATAAAAATATCTTCTTCTTCACCTTCACCATAATCCTTCTTCTTCTTCACTTTCACTTTCACCACCACATAACCCTAAGCCCTACCGCCAGCAGCCACCGCAAAATGAAACGTAATCCAAACCTAAGGAACCAAAAGTGTACTTTTTTCCAAAAGATTAAATATACCTTAAATGCTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCCTTGCTAACACATATTATTATTTCATGATGTTAAAAATATGATAATGGCATATGTCAAACCAAAAGTATTGACTCTTAATTACCTTGACAACACTTGTAGATTAATCCCTTGAAGGAGGAACTTGACAAGTATTGGCCAACTTATCAATGTGGTTCTCAACCAACCTGCAATGGTAGAACAGGATCCTTGTGGGCTGAAGAGGTTCTAAATTCTCAATCTCTCCTCTCCTTTAATTTTCTTCCTTAATTACCTCATTATCAAAATTTTAGACTAACCCTAATTTCTCTCATCTTTTGTCTCTCTCTTGTTGCCATTGCTGCAGTATGGTAAGCCACTTCGACCCGTACGTTTCTTTGTTTTATTATCTACACCCTAAAAATATTTTCAAAATCCAGAGAAAAAAGTAAATTTTTAAGAACTTGTTTTTGTTTCTGAAATTTGACTAACAGTTTAAATGTTTTTTGAGCATTCAAAAACCAAAAACCAAGGCCCCATTTGATAACGTCATTTGGTTTTTTGTTTTTGGTTTTTTTAAATTATTAAGCTAATAAACATTACTCCCACTTAAGAGTTTTTTTGTTTTTTCATCTACCTTGTTTCCATGTTTTCAAAAACCAAACCGATTTTTTAAAACTAAAAAAAGTCGTTTTCAAAAACTTCGTTTTTGTTTTTGGAATTTGACTAGGAATTCAAATGCATCTTTAACAAAGATATGAAAACCATAGCAAGTAAAATGGAAGAAAACAAACATATTTTTCAAAGACCAAATGGTTATCAAACGGGACACAAATAATGTTTACGAAACGGATCTAATTTTGCAGAGAGGCATGGAACTTGCGCATCTCATGTAATGAAGAGCGAATTTGAATACTTCGATCAATCCCTCAATCTGTTCTTAGAGTCCAATGTCAATGTAAGCTTTTATAAACTTTTTTTTTTTCTTTACAACGAAGTACGCTTATGTTGGCTAAGTTTTTATAAACTTGGTTATCGATTTTCAACCGTTAAATTAAAATGAAAACTTTGGTGCAATATATATATTTATAAAACCTTTTTTTTTTTTTTTTTGTTACTTAGAAAGCTTTGAAGAATGCAAATATCGTAGCTTCGGATACTGTAACGTATTCCAAAGATGAGGTGATCCATGTAATTGAGGAGGCTGTTTTACGAGGAAAGCCAGAGCTTATATGTGATGATGATGATGAGATTGTCAAGGAACTTTGGCTATGCTATGATAAACGACTAGTGGTATTACTTTGTGTTTGTAAAATTAAGGTCCCGTTTGATAACTATTTGGTTTTTTAAAATCATGAGGTAAATTGATACTAAAACAAAGAAACTTATAGGTGGGAGTAGGTGTTGTATAAACTTAATTTTCAAAAACCAAAAACAAAAAGCTAAATAATTATCAAACGGGGCCTAATTAATTAATATTCCTAACTGTGATAGATTGATGATCAAAAACTAAATGTTTACTCTTTATATATGCAGCCTCGTGATTGTGATCCTCCTACTATAGAATCATGCTCCGACTCTATTAAGCTCCCGCTAAAACCTCCACCATCGGGTAAGTTTCTTTCTATTCTAAGGATCTAAATTCATCGAGCCATAGTGACGGTTGGTCAGTTTTAAGCTCAGAGAGAAAAGGGAGAAAACCCAAATGGTTATCAAACGAGACCTTAGTTTATAGATACCCTTATAATTCTTAGATAATAAAGTTTTCTTGGTTAAATCACCCTGAATACATAGACTATAATAATTAAAGAGAGAAATGAAGTTGAAGAGATTGACACACAAAATACGTCTGGTGTGTTTTGGTACTATATAAGATCATCGCTAAACCCAAAAGCTTAGATTAAATAACTAATCAATATATTTATTTCATTGGCAATTGGTTTTGAGATGTAAGCCCATATAATATAATATTATTGCAGAGACATGTTGCGGGGCTAATGGAGCAATTTCATGGATGTAG ATGGCTTCTTTGTCGTTGAAAGCGGCGGCGGCGGCGGTGCTTGTGGCTGTTGCCTTTGTTGCTCAGCTGCAGGCGGCGAGGTTTGGGGCGGAGGAGAATGAATTTGACTACTTTGTGTTATCGCTGCAATGGTCAGGCACTTCCTGCAGAAGCAATAGCGTGTGTTGCCCAGAAAGTGGCTGCTGCGCTGGAGCTGACACTCCGACTCAATTTACAATTCATGGGCTGTGGCCTGTGAAAGAATGGGGTAAAAATCCTGAATGTTGTACTGATGCCGTATATAATGAAACTGAGATTAATCCCTTGAAGGAGGAACTTGACAAGTATTGGCCAACTTATCAATGTGGTTCTCAACCAACCTGCAATGGTAGAACAGGATCCTTGTGGGCTGAAGAGTATGGTAAGCCACTTCGACCCGAATTCAAATGCATCTTTAACAAAGATATGAAAACCATAGCAAAGAGGCATGGAACTTGCGCATCTCATGTAATGAAGAGCGAATTTGAATACTTCGATCAATCCCTCAATCTGTTCTTAGAGTCCAATGTCAATAAAGCTTTGAAGAATGCAAATATCGTAGCTTCGGATACTGTAACGTATTCCAAAGATGAGGTGATCCATGTAATTGAGGAGGCTGTTTTACGAGGAAAGCCAGAGCTTATATGTGATGATGATGATGAGATTGTCAAGGAACTTTGGCTATGCTATGATAAACGACTAGTGCCTCGTGATTGTGATCCTCCTACTATAGAATCATGCTCCGACTCTATTAAGCTCCCGCTAAAACCTCCACCATCGGAGACATGTTGCGGGGCTAATGGAGCAATTTCATGGATGTAG ATGGCTTCTTTGTCGTTGAAAGCGGCGGCGGCGGCGGTGCTTGTGGCTGTTGCCTTTGTTGCTCAGCTGCAGGCGGCGAGGTTTGGGGCGGAGGAGAATGAATTTGACTACTTTGTGTTATCGCTGCAATGGTCAGGCACTTCCTGCAGAAGCAATAGCGTGTGTTGCCCAGAAAGTGGCTGCTGCGCTGGAGCTGACACTCCGACTCAATTTACAATTCATGGGCTGTGGCCTGTGAAAGAATGGGGTAAAAATCCTGAATGTTGTACTGATGCCGTATATAATGAAACTGAGATTAATCCCTTGAAGGAGGAACTTGACAAGTATTGGCCAACTTATCAATGTGGTTCTCAACCAACCTGCAATGGTAGAACAGGATCCTTGTGGGCTGAAGAGTATGGTAAGCCACTTCGACCCGAATTCAAATGCATCTTTAACAAAGATATGAAAACCATAGCAAAGAGGCATGGAACTTGCGCATCTCATGTAATGAAGAGCGAATTTGAATACTTCGATCAATCCCTCAATCTGTTCTTAGAGTCCAATGTCAATAAAGCTTTGAAGAATGCAAATATCGTAGCTTCGGATACTGTAACGTATTCCAAAGATGAGGTGATCCATGTAATTGAGGAGGCTGTTTTACGAGGAAAGCCAGAGCTTATATGTGATGATGATGATGAGATTGTCAAGGAACTTTGGCTATGCTATGATAAACGACTAGTGCCTCGTGATTGTGATCCTCCTACTATAGAATCATGCTCCGACTCTATTAAGCTCCCGCTAAAACCTCCACCATCGGAGACATGTTGCGGGGCTAATGGAGCAATTTCATGGATGTAG MASLSLKAAAAAVLVAVAFVAQLQAARFGAEENEFDYFVLSLQWSGTSCRSNSVCCPESGCCAGADTPTQFTIHGLWPVKEWGKNPECCTDAVYNETEINPLKEELDKYWPTYQCGSQPTCNGRTGSLWAEEYGKPLRPEFKCIFNKDMKTIAKRHGTCASHVMKSEFEYFDQSLNLFLESNVNKALKNANIVASDTVTYSKDEVIHVIEEAVLRGKPELICDDDDEIVKELWLCYDKRLVPRDCDPPTIESCSDSIKLPLKPPPSETCCGANGAISWM Homology
BLAST of Lag0019782 vs. NCBI nr
Match: XP_022922895.1 (ribonuclease 2-like [Cucurbita moschata]) HSP 1 Score: 234.2 bits (596), Expect = 1.4e-57 Identity = 125/286 (43.71%), Postives = 168/286 (58.74%), Query Frame = 0
BLAST of Lag0019782 vs. NCBI nr
Match: XP_022140986.1 (ribonuclease 2-like [Momordica charantia]) HSP 1 Score: 233.0 bits (593), Expect = 3.1e-57 Identity = 118/256 (46.09%), Postives = 160/256 (62.50%), Query Frame = 0
BLAST of Lag0019782 vs. NCBI nr
Match: XP_022140985.1 (ribonuclease 2-like [Momordica charantia]) HSP 1 Score: 231.9 bits (590), Expect = 6.8e-57 Identity = 128/287 (44.60%), Postives = 165/287 (57.49%), Query Frame = 0
BLAST of Lag0019782 vs. NCBI nr
Match: XP_004137162.1 (ribonuclease 2 [Cucumis sativus]) HSP 1 Score: 228.0 bits (580), Expect = 9.9e-56 Identity = 123/287 (42.86%), Postives = 163/287 (56.79%), Query Frame = 0
BLAST of Lag0019782 vs. NCBI nr
Match: XP_038876700.1 (ribonuclease 2-like [Benincasa hispida]) HSP 1 Score: 227.6 bits (579), Expect = 1.3e-55 Identity = 125/287 (43.55%), Postives = 162/287 (56.45%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy Swiss-Prot
Match: P42814 (Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 4.0e-44 Identity = 100/264 (37.88%), Postives = 137/264 (51.89%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.0e-15 Identity = 63/224 (28.12%), Postives = 104/224 (46.43%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy Swiss-Prot
Match: Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14 Identity = 67/259 (25.87%), Postives = 105/259 (40.54%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 4.1e-12 Identity = 56/209 (26.79%), Postives = 96/209 (45.93%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy Swiss-Prot
Match: P04007 (Ribonuclease S-2 OS=Nicotiana alata OX=4087 GN=S-2 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.7e-11 Identity = 63/224 (28.12%), Postives = 93/224 (41.52%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy TrEMBL
Match: A0A6J1EA39 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111430737 PE=3 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 6.7e-58 Identity = 125/286 (43.71%), Postives = 168/286 (58.74%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy TrEMBL
Match: A0A6J1CHM7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011505 PE=3 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 1.5e-57 Identity = 118/256 (46.09%), Postives = 160/256 (62.50%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy TrEMBL
Match: A0A6J1CGP7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011504 PE=3 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 3.3e-57 Identity = 128/287 (44.60%), Postives = 165/287 (57.49%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy TrEMBL
Match: A0A0A0L0P9 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_4G109540 PE=3 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 4.8e-56 Identity = 123/287 (42.86%), Postives = 163/287 (56.79%), Query Frame = 0
BLAST of Lag0019782 vs. ExPASy TrEMBL
Match: A0A6J1J670 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111482949 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.1e-55 Identity = 123/288 (42.71%), Postives = 165/288 (57.29%), Query Frame = 0
BLAST of Lag0019782 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 ) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-45 Identity = 100/264 (37.88%), Postives = 137/264 (51.89%), Query Frame = 0
BLAST of Lag0019782 vs. TAIR 10
Match: AT2G39780.2 (ribonuclease 2 ) HSP 1 Score: 134.4 bits (337), Expect = 1.4e-31 Identity = 85/264 (32.20%), Postives = 114/264 (43.18%), Query Frame = 0
BLAST of Lag0019782 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 ) HSP 1 Score: 85.5 bits (210), Expect = 7.4e-17 Identity = 63/224 (28.12%), Postives = 104/224 (46.43%), Query Frame = 0
BLAST of Lag0019782 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein ) HSP 1 Score: 69.7 bits (169), Expect = 4.2e-12 Identity = 63/258 (24.42%), Postives = 107/258 (41.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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