Lag0019766 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019766
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr5: 45222112 .. 45222883 (-)
RNA-Seq ExpressionLag0019766
SyntenyLag0019766
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTTGGGCTCGAAGTTTGCTTCTTTAGATCTCTCTAATGTAGGGCCTGATGTGGTTTCTGTGTTGTGGGCTGTTAAGGAGAGGTTGAGTATTCGGGATTTTGAGCTGGTGACTATTTTTTGGTGGGCTGTATGGGGTTTGAGGAACACAGTGTGTTGGGGGGGGGGGGCTTGCGGATGACAGAGATTTAATGGAGTGGGCTGTTGTTTTTCTTGAATCGTTTCAGCAGGTTGGGCCGTCGGTGGGGTTGGTTGCGGGCCATCAGCACTGTGCTGCTGTGTGTGCATGGAGGCCGCCGGAGGATGGTGATCTGAAACTGAACTCTGATGCGTCGGTGAGACCGGGGTGTGGCACGGCTGGGGGCGGCGTAGTCCTGAGAAATGGGAGGGGTGAGGTGCTGTTGTCGGCTTGTTTCGTTTTGCCAAGTTGTTGGAATGTTGATTTCGCTGAGGCATGGGCTTTGTTAAGGGGCATTGAGACTGCACATCAAATGGGTTTCTTTCGGTTCCATGTAGAGACTGACTCTCTAAGGTTAGCAAATTTTTTAAATGAGAAGGTGGAGGATGTGTCGGAGATGGGAGTAATGATGAATAGGGTACGTGATCTCCTTCTCCATGATTCTTCCTGCAGAGTTGCCTTCACGCCTAGGAAAGGAAACATGGTTGCTCATATAATGGTGTCTTTAGCTTTCACTTATGCGGATTTTATTTGGCTTGAAGAATGGCCTCCTGAGGCCTCTGATGTAATTTGTTCTGAGTTTTCTCCTTAA

mRNA sequence

ATGTGGTTGGGCTCGAAGTTTGCTTCTTTAGATCTCTCTAATGTAGGGCCTGATGTGGTTTCTGTGTTGTGGGCTGTTAAGGAGAGGTTGAGTATTCGGGATTTTGAGCTGGTTGGGCCGTCGGTGGGGTTGGTTGCGGGCCATCAGCACTGTGCTGCTGTGTGTGCATGGAGGCCGCCGGAGGATGGTGATCTGAAACTGAACTCTGATGCGTCGGTGAGACCGGGGTGTGGCACGGCTGGGGGCGGCGTAGTCCTGAGAAATGGGAGGGGTGAGGTGCTGTTGTCGGCTTGTTTCGTTTTGCCAAGTTGTTGGAATGTTGATTTCGCTGAGGCATGGGCTTTGTTAAGGGGCATTGAGACTGCACATCAAATGGGTTTCTTTCGGTTCCATGTAGAGACTGACTCTCTAAGGTTAGCAAATTTTTTAAATGAGAAGGTGGAGGATGTGTCGGAGATGGGAGTAATGATGAATAGGGTACGTGATCTCCTTCTCCATGATTCTTCCTGCAGAGTTGCCTTCACGCCTAGGAAAGGAAACATGGTTGCTCATATAATGGTGTCTTTAGCTTTCACTTATGCGGATTTTATTTGGCTTGAAGAATGGCCTCCTGAGGCCTCTGATGTAATTTGTTCTGAGTTTTCTCCTTAA

Coding sequence (CDS)

ATGTGGTTGGGCTCGAAGTTTGCTTCTTTAGATCTCTCTAATGTAGGGCCTGATGTGGTTTCTGTGTTGTGGGCTGTTAAGGAGAGGTTGAGTATTCGGGATTTTGAGCTGGTTGGGCCGTCGGTGGGGTTGGTTGCGGGCCATCAGCACTGTGCTGCTGTGTGTGCATGGAGGCCGCCGGAGGATGGTGATCTGAAACTGAACTCTGATGCGTCGGTGAGACCGGGGTGTGGCACGGCTGGGGGCGGCGTAGTCCTGAGAAATGGGAGGGGTGAGGTGCTGTTGTCGGCTTGTTTCGTTTTGCCAAGTTGTTGGAATGTTGATTTCGCTGAGGCATGGGCTTTGTTAAGGGGCATTGAGACTGCACATCAAATGGGTTTCTTTCGGTTCCATGTAGAGACTGACTCTCTAAGGTTAGCAAATTTTTTAAATGAGAAGGTGGAGGATGTGTCGGAGATGGGAGTAATGATGAATAGGGTACGTGATCTCCTTCTCCATGATTCTTCCTGCAGAGTTGCCTTCACGCCTAGGAAAGGAAACATGGTTGCTCATATAATGGTGTCTTTAGCTTTCACTTATGCGGATTTTATTTGGCTTGAAGAATGGCCTCCTGAGGCCTCTGATGTAATTTGTTCTGAGTTTTCTCCTTAA

Protein sequence

MWLGSKFASLDLSNVGPDVVSVLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADFIWLEEWPPEASDVICSEFSP
Homology
BLAST of Lag0019766 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-22
Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = 0

Query: 54  VCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAW 113
           V  WRPP    LK+N DA+ R     AG GV++R+  G V L+A  +L    +VD+ E +
Sbjct: 101 VAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGF 160

Query: 114 ALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLL-LHDSSCRV 173
           A+  GI  A + GF RF +ETDSLR+ N L     D SE+GV+ + ++  L  H      
Sbjct: 161 AVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVIKLFLSSHAERVSF 220

Query: 174 AFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI 211
           +FT R GN  AH++  LA T     IW+EEWP E S V+
Sbjct: 221 SFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVL 259

BLAST of Lag0019766 vs. NCBI nr
Match: XP_021735105.1 (uncharacterized protein LOC110701784 [Chenopodium quinoa])

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-20
Identity = 63/205 (30.73%), Postives = 108/205 (52.68%), Query Frame = 0

Query: 24  WAVKERLSIRDFELVGPSVGLVAGHQHCAAV-----------CAWRPPEDGDLKLNSDAS 83
           WA  +R  +   +++  +VG+V   +H   V           C W+PP  G +K+NSDA+
Sbjct: 82  WAF-DRKRLDKIKVIRKAVGMVGEFEHAKEVCNTNPSPPTFECVWKPPLAGIIKINSDAA 141

Query: 84  VRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLR-GIETAHQMGFFRFH 143
           V    G    G V+R+  G+V+ S C  +  C++VD  EA A++R  +  A + GF    
Sbjct: 142 VFSPSGVGLEG-VMRDSVGDVVASTCSKIDGCFDVDVVEALAMMRHSLYIAMEAGFRCVS 201

Query: 144 VETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAF 203
           +ETD L+L N L + +   +  GV++N +  L     SC  +F  R GN VAH +   + 
Sbjct: 202 LETDCLKLHNHLVKGLTTPTTFGVIVNDMLKLAQLCQSCCYSFVKRGGNKVAHALAKCSI 261

Query: 204 TYADF-IWLEEWPPEASDVICSEFS 216
            +  F +W+E++PP+ ++ + ++ S
Sbjct: 262 NFVGFRVWMEKFPPDVTEFVVADLS 284

BLAST of Lag0019766 vs. NCBI nr
Match: XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-18
Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 0

Query: 22  VLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAG 81
           V WA K  +  R+     P  G V       A   W PP+    K+N+DAS       AG
Sbjct: 4   VEWANKYVMEFREAN-SNPFPGRVTN----TAEVLWLPPDKRIYKINTDASFLASDQHAG 63

Query: 82  GGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLAN 141
            G+++RN RG+V+ SA   L +  +VD AEA   + G++ A ++G     +ETDS R+ N
Sbjct: 64  LGIIIRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIFN 123

Query: 142 FLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLE 201
             ++  ED+SE G ++ + ++           F  R+GN  AH++   A    +F IW+E
Sbjct: 124 LFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLREFSIWME 183

Query: 202 EWPPE 206
           +WP E
Sbjct: 184 DWPLE 183

BLAST of Lag0019766 vs. NCBI nr
Match: XP_021716820.1 (uncharacterized protein LOC110684687 [Chenopodium quinoa])

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-18
Identity = 56/185 (30.27%), Postives = 97/185 (52.43%), Query Frame = 0

Query: 32  IRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRG 91
           + D+E    ++    G +H      W+PP  G +K+NSDA++        GG V+R+  G
Sbjct: 117 VGDYEQAQQALSSSEG-RHQLLESKWKPPTQGMIKINSDAAIFDNSAVGLGG-VMRDALG 176

Query: 92  EVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVS 151
           EV+++ C  L S + VD AEA AL   +  A +  F +  +ETD +++ + L +     +
Sbjct: 177 EVVVATCLCLRSKYEVDVAEALALRHSLRIALESEFRKVCLETDCMKVFSHLTKGCAPAT 236

Query: 152 EMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI 211
            +G+++N +  L     SC  +F  R GN  AH +  L+ +Y D  +W+EE P E S  +
Sbjct: 237 ILGMVINDIMQLARGCQSCSFSFVKRSGNGAAHALAKLSSSYGDLRVWMEEVPSEISPFV 296

Query: 212 CSEFS 216
            ++ +
Sbjct: 297 MADLA 299

BLAST of Lag0019766 vs. NCBI nr
Match: XP_021739472.1 (uncharacterized protein LOC110705848 [Chenopodium quinoa])

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-17
Identity = 51/160 (31.87%), Postives = 89/160 (55.62%), Query Frame = 0

Query: 55  CAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWA 114
           C W+ P +G +K+NSDA++       G G V+R+  G+V+ + C  +   ++VD  EA A
Sbjct: 104 CKWKSPPEGVIKVNSDAAIFKS-RMVGLGGVMRDSVGDVVAATCLQVAGSFDVDVVEAMA 163

Query: 115 LLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAF 174
           +   +  A + GF R  +ETD+++L   L+++ ED++  G++   +  L      C  AF
Sbjct: 164 MRHALVIAMESGFLRVCLETDNIKLHYGLSKQKEDLTAFGLITKDILKLANSCHECSFAF 223

Query: 175 TPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSE 214
             R GN VAH +  L+  +    +WLEE+P E  +V+ ++
Sbjct: 224 VKRTGNQVAHSLAKLSSKFVSLRVWLEEYPIEIHEVVMAD 262

BLAST of Lag0019766 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.4e-23
Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = 0

Query: 54  VCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAW 113
           V  WRPP    LK+N DA+ R     AG GV++R+  G V L+A  +L    +VD+ E +
Sbjct: 101 VAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGF 160

Query: 114 ALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLL-LHDSSCRV 173
           A+  GI  A + GF RF +ETDSLR+ N L     D SE+GV+ + ++  L  H      
Sbjct: 161 AVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVIKLFLSSHAERVSF 220

Query: 174 AFTPRKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVI 211
           +FT R GN  AH++  LA T     IW+EEWP E S V+
Sbjct: 221 SFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVL 259

BLAST of Lag0019766 vs. ExPASy TrEMBL
Match: A0A6J1CIF1 (uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011237 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 0

Query: 22  VLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCGTAG 81
           V WA K  +  R+     P  G V       A   W PP+    K+N+DAS       AG
Sbjct: 4   VEWANKYVMEFREAN-SNPFPGRVTN----TAEVLWLPPDKRIYKINTDASFLASDQHAG 63

Query: 82  GGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLRLAN 141
            G+++RN RG+V+ SA   L +  +VD AEA   + G++ A ++G     +ETDS R+ N
Sbjct: 64  LGIIIRNDRGQVMASATKYLENIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIFN 123

Query: 142 FLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF-IWLE 201
             ++  ED+SE G ++ + ++           F  R+GN  AH++   A    +F IW+E
Sbjct: 124 LFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKAAHMLARRALLLREFSIWME 183

Query: 202 EWPPE 206
           +WP E
Sbjct: 184 DWPLE 183

BLAST of Lag0019766 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.2e-16
Identity = 62/198 (31.31%), Postives = 102/198 (51.52%), Query Frame = 0

Query: 19  VVSVLWAVKERLSIRDFELVGPSVGLVAGHQHCAAVCAWRPPEDGDLKLNSDASVRPGCG 78
           +V+++  V + L +      GPS+ L+   +    V AW PP     K+N DA+ + G  
Sbjct: 36  LVNMVDWVADYLQVYQSAQEGPSLPLLLDGRG-GRVSAWCPPLAPFFKVNVDAAFKKGNF 95

Query: 79  TAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALLRGIETAHQMGFFRFHVETDSLR 138
           +AG  +++R+    VLLSA   +    +V  AE  A   G+  A + G   F +ETDS +
Sbjct: 96  SAGLDILIRDSTVNVLLSAMCFITHVSDVTLAECLAAQEGVCLAIEAGLIPFQIETDSSQ 155

Query: 139 LANFLNEKVEDVSEMGVMMNRVRDLL--LHDSSCRVAFTPRKGNMVAHIMVSLAFTYADF 198
           + N L    ED SE+GV+ + +R ++  LH      +F  R+GN  AH +  +      F
Sbjct: 156 VFNLLRTDCEDESEIGVLASSIRHIVSSLHIGG-GFSFVNREGNSGAHTLARMGMVSESF 215

Query: 199 -IWLEEWPPEASDVICSE 214
            +W+EEW  + S+VI ++
Sbjct: 216 HVWVEEWLSDLSEVIAAD 231

BLAST of Lag0019766 vs. ExPASy TrEMBL
Match: A0A803MB59 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.9e-16
Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 0

Query: 57  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALL 116
           W+PP+ G +K+NSDA++  G  T G G ++R+  G+V+ S C  L   ++VD AEA AL 
Sbjct: 15  WKPPDHGVIKINSDAAI-CGNNTVGLGGIMRDKVGDVVASTCLCLRGKYDVDVAEALALR 74

Query: 117 RGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTP 176
             +  +  +GF +  +ETD L+L + L++     + +G+++N +  L     SC  +F  
Sbjct: 75  HALNISLDLGFRKVCLETDCLKLHSHLSKGNAPSTVIGMVVNDIIQLARGCHSCSFSFVK 134

Query: 177 RKGNMVAHIMVSLAFTYADF-IWLEEWPPEASDVICSEFS 216
           R GN VAH +  L+ ++ +  + +EE P   S  + ++ +
Sbjct: 135 RSGNCVAHELAKLSSSFVELRVLMEEVPSGISSFVMADLA 173

BLAST of Lag0019766 vs. ExPASy TrEMBL
Match: A0A5C7IPG1 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005277 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.4e-16
Identity = 50/161 (31.06%), Postives = 84/161 (52.17%), Query Frame = 0

Query: 51  CAAVCAWRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFA 110
           C  V  WRPP+ G  K+N+DA++       G  V++R+ RG V+ S+   + + ++    
Sbjct: 64  CILVPPWRPPDSGLFKVNTDATIDVEGNKVGIWVIIRDCRGSVMASSAQPISAAFSPQVT 123

Query: 111 EAWALLRGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSC 170
           EA A+LR +  A   G     +E+D+  + NF++      SE+G+ +  +R  L      
Sbjct: 124 EAVAILRDLHLALDCGLLPCSLESDAQVVVNFIDMDGFHCSEVGLFVKDIRLFLERFPLW 183

Query: 171 RVAFTPRKGNMVAHIMVSLAFTY-ADFIWLEEWPPEASDVI 211
            ++FTPR  N+ AH +V L  ++  D  W+EE PP    V+
Sbjct: 184 SISFTPRSANVAAHCLVKLGLSFIVDRFWIEECPPSVYPVV 224

BLAST of Lag0019766 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 38/140 (27.14%), Postives = 63/140 (45.00%), Query Frame = 0

Query: 57  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALL 116
           WRPP    +K N+DA+        G G VLRN +GEV       LP   +V  AE  A+ 
Sbjct: 420 WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMR 479

Query: 117 RGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTP 176
             + +  +  +     E+DS  L   LN   E    +   +  ++ LL   +  +  F P
Sbjct: 480 WAVLSLSRFQYNYVIFESDSQVLIEILNND-EIWPSLKPTIQDLQRLLSQFTEVKFVFIP 539

Query: 177 RKGNMVAHIMVSLAFTYADF 197
           R+GN +A  +   + ++ ++
Sbjct: 540 REGNTLAERVARESLSFLNY 558

BLAST of Lag0019766 vs. TAIR 10
Match: AT5G61090.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 5.6e-04
Identity = 32/148 (21.62%), Postives = 59/148 (39.86%), Query Frame = 0

Query: 57  WRPPEDGDLKLNSDASVRPGCGTAGGGVVLRNGRGEVLLSACFVLPSCWNVDFAEAWALL 116
           W PP    +KLN   +  P         ++R+  G+ +        S   V  A   A+ 
Sbjct: 499 WTPPL---VKLNIQGTSNPLSDLTRSAGIVRDQSGKWVFGYIRCHKSIPEV-VAGLLAIY 558

Query: 117 RGIETAHQMGFFRFHVETDSLRLANFLNEKVEDVSEMGVMMNRVRDLLLHDSSCRVAFTP 176
           +G++     GF R H+ET S  + N L  K     +   ++   +D++L +  C +    
Sbjct: 559 QGLKYLWDSGFRRIHLETTSFEIINALTTKSSLFCKSKTLLGACKDMILKEWECDIYHIS 618

Query: 177 RKGNMVAHIMVSLAFTYADFIWLEEWPP 205
           ++ N  A  +   +      +   E+PP
Sbjct: 619 KEQNSCAEWLAKRSEEQPQELVFFEYPP 642

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150944.11.1e-2241.51uncharacterized protein LOC111018973 [Momordica charantia][more]
XP_021735105.13.0e-2030.73uncharacterized protein LOC110701784 [Chenopodium quinoa][more]
XP_022140628.12.8e-1832.97uncharacterized protein LOC111011237 [Momordica charantia][more]
XP_021716820.12.8e-1830.27uncharacterized protein LOC110684687 [Chenopodium quinoa][more]
XP_021739472.11.4e-1731.88uncharacterized protein LOC110705848 [Chenopodium quinoa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DBJ75.4e-2341.51uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1CIF11.4e-1832.97uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A6J1C4672.2e-1631.31uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A803MB594.9e-1631.88Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A5C7IPG16.4e-1631.06RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005277 ... [more]
Match NameE-valueIdentityDescription
AT4G29090.12.0e-0627.14Ribonuclease H-like superfamily protein [more]
AT5G61090.15.6e-0421.62Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 63..192
e-value: 8.3E-13
score: 50.5
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 68..189
e-value: 1.1E-23
score: 83.3
NoneNo IPR availablePANTHERPTHR47723OS05G0353850 PROTEINcoord: 52..202
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 67..186
e-value: 2.6059E-21
score: 83.1324
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 64..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019766.1Lag0019766.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity