Lag0019764 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATTAGAAGCTTCGTCGTGATGATTTTGGTGGCGATGTTGATCGGCTCCACAATCGCCCAATCGCCGGCGGCATCTCCGTCAATGTCTCCAAGCAAATCGCCGTCGAAGGCTCCGTCGGCTTCTCCGTCTGTGAAGTCTCCGAAATCATCTCCCGCGGCGGCGCCTACTCCGTCCTCTCTGAAGTCTCCGCCATCTCCTCCTGCTTCTTCTCCGTCCTCGTCTCCATCTCCTGCGACTTCTCCGTCCTCGATCTCCTCGCCTCCAGCCGACGCTCCGGCTCCGTCCGGTAATGGCGCCGCTTCGATATCTTTCTCGGTGATCGGATCTGTGGCCGTTGCGCTATACGCCGCCGTTTTGATGATCTGA ATGGCGATTAGAAGCTTCGTCGTGATGATTTTGGTGGCGATGTTGATCGGCTCCACAATCGCCCAATCGCCGGCGGCATCTCCGTCAATGTCTCCAAGCAAATCGCCGTCGAAGGCTCCGTCGGCTTCTCCGTCTGTGAAGTCTCCGAAATCATCTCCCGCGGCGGCGCCTACTCCGTCCTCTCTGAAGTCTCCGCCATCTCCTCCTGCTTCTTCTCCGTCCTCGTCTCCATCTCCTGCGACTTCTCCGTCCTCGATCTCCTCGCCTCCAGCCGACGCTCCGGCTCCGTCCGGTAATGGCGCCGCTTCGATATCTTTCTCGGTGATCGGATCTGTGGCCGTTGCGCTATACGCCGCCGTTTTGATGATCTGA ATGGCGATTAGAAGCTTCGTCGTGATGATTTTGGTGGCGATGTTGATCGGCTCCACAATCGCCCAATCGCCGGCGGCATCTCCGTCAATGTCTCCAAGCAAATCGCCGTCGAAGGCTCCGTCGGCTTCTCCGTCTGTGAAGTCTCCGAAATCATCTCCCGCGGCGGCGCCTACTCCGTCCTCTCTGAAGTCTCCGCCATCTCCTCCTGCTTCTTCTCCGTCCTCGTCTCCATCTCCTGCGACTTCTCCGTCCTCGATCTCCTCGCCTCCAGCCGACGCTCCGGCTCCGTCCGGTAATGGCGCCGCTTCGATATCTTTCTCGGTGATCGGATCTGTGGCCGTTGCGCTATACGCCGCCGTTTTGATGATCTGA MAIRSFVVMILVAMLIGSTIAQSPAASPSMSPSKSPSKAPSASPSVKSPKSSPAAAPTPSSLKSPPSPPASSPSSSPSPATSPSSISSPPADAPAPSGNGAASISFSVIGSVAVALYAAVLMI Homology
BLAST of Lag0019764 vs. NCBI nr
Match: XP_038877310.1 (classical arabinogalactan protein 1 [Benincasa hispida]) HSP 1 Score: 150.2 bits (378), Expect = 1.2e-32 Identity = 107/127 (84.25%), Postives = 113/127 (88.98%), Query Frame = 0
BLAST of Lag0019764 vs. NCBI nr
Match: XP_023542663.1 (classical arabinogalactan protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.5 bits (371), Expect = 7.5e-32 Identity = 100/123 (81.30%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Lag0019764 vs. NCBI nr
Match: XP_022942993.1 (classical arabinogalactan protein 1-like [Cucurbita moschata]) HSP 1 Score: 145.6 bits (366), Expect = 2.8e-31 Identity = 102/123 (82.93%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Lag0019764 vs. NCBI nr
Match: KAG7030900.1 (hypothetical protein SDJN02_04937, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.5 bits (358), Expect = 2.4e-30 Identity = 98/118 (83.05%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of Lag0019764 vs. NCBI nr
Match: XP_022922765.1 (classical arabinogalactan protein 1-like [Cucurbita moschata] >KAG6576848.1 Classical arabinogalactan protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-29 Identity = 102/123 (82.93%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Lag0019764 vs. ExPASy Swiss-Prot
Match: Q8LCN5 (Classical arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=AGP1 PE=2 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 2.9e-10 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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