Lag0019752 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCCAACTTCTTCATCCTAGCCTTCATGGTTGCTATAGCATTTTCGAGTGTCGACGCTGGTCGAACTACTCGCCATCTTATGCAAACCGCTCAGCCTTCGATTCCAAATTTGCCACCACTGCCATCGCTACCTAAGCCAACTGCGCTACCGCCTCTACCACCGAGTATTCCATCCATCCCGAATCTCCCACAACCTACATTGCCAATTGCTCAACCTCCGCTACCTAAGCTTACACTTCCTCCCGGCTTCCCGATGAACATCCCGACTGGAGCTGCATTGCCTCCTCTTCCGACGACTTCGCTTCCGAACTTGCCATCCCTCCCATCTATCCCGACTTCACTTCCGTCGCTCCCGTTCTTCTCTCCTCCACCTGCAACTTCTTCCCCTTGA ATGGCTTCTTCCAACTTCTTCATCCTAGCCTTCATGGTTGCTATAGCATTTTCGAGTGTCGACGCTGGTCGAACTACTCGCCATCTTATGCAAACCGCTCAGCCTTCGATTCCAAATTTGCCACCACTGCCATCGCTACCTAAGCCAACTGCGCTACCGCCTCTACCACCGAGTATTCCATCCATCCCGAATCTCCCACAACCTACATTGCCAATTGCTCAACCTCCGCTACCTAAGCTTACACTTCCTCCCGGCTTCCCGATGAACATCCCGACTGGAGCTGCATTGCCTCCTCTTCCGACGACTTCGCTTCCGAACTTGCCATCCCTCCCATCTATCCCGACTTCACTTCCGTCGCTCCCGTTCTTCTCTCCTCCACCTGCAACTTCTTCCCCTTGA ATGGCTTCTTCCAACTTCTTCATCCTAGCCTTCATGGTTGCTATAGCATTTTCGAGTGTCGACGCTGGTCGAACTACTCGCCATCTTATGCAAACCGCTCAGCCTTCGATTCCAAATTTGCCACCACTGCCATCGCTACCTAAGCCAACTGCGCTACCGCCTCTACCACCGAGTATTCCATCCATCCCGAATCTCCCACAACCTACATTGCCAATTGCTCAACCTCCGCTACCTAAGCTTACACTTCCTCCCGGCTTCCCGATGAACATCCCGACTGGAGCTGCATTGCCTCCTCTTCCGACGACTTCGCTTCCGAACTTGCCATCCCTCCCATCTATCCCGACTTCACTTCCGTCGCTCCCGTTCTTCTCTCCTCCACCTGCAACTTCTTCCCCTTGA MASSNFFILAFMVAIAFSSVDAGRTTRHLMQTAQPSIPNLPPLPSLPKPTALPPLPPSIPSIPNLPQPTLPIAQPPLPKLTLPPGFPMNIPTGAALPPLPTTSLPNLPSLPSIPTSLPSLPFFSPPPATSSP Homology
BLAST of Lag0019752 vs. NCBI nr
Match: KGN53897.1 (hypothetical protein Csa_011821 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 4.0e-31 Identity = 98/140 (70.00%), Postives = 104/140 (74.29%), Query Frame = 0
BLAST of Lag0019752 vs. NCBI nr
Match: XP_038904306.1 (protein PELPK1-like [Benincasa hispida]) HSP 1 Score: 142.1 bits (357), Expect = 3.4e-30 Identity = 95/136 (69.85%), Postives = 104/136 (76.47%), Query Frame = 0
BLAST of Lag0019752 vs. NCBI nr
Match: XP_038904304.1 (RNA-binding protein 12-like [Benincasa hispida]) HSP 1 Score: 129.4 bits (324), Expect = 2.3e-26 Identity = 86/138 (62.32%), Postives = 100/138 (72.46%), Query Frame = 0
BLAST of Lag0019752 vs. NCBI nr
Match: KAA0056641.1 (proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa] >TYK07567.1 proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 5.0e-26 Identity = 79/133 (59.40%), Postives = 96/133 (72.18%), Query Frame = 0
BLAST of Lag0019752 vs. NCBI nr
Match: KAG6595525.1 (hypothetical protein SDJN03_12078, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.9 bits (320), Expect = 6.6e-26 Identity = 80/134 (59.70%), Postives = 93/134 (69.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|