Lag0019744 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019744
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Glutamine amidotransferase type-1 domain-containing protein
Location	chr5: 45075112 .. 45075660 (+)
RNA-Seq Expression	Lag0019744
Synteny	Lag0019744

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATGAAGAGATTTGCAGTGCTTCTCTGCGCCGAAGATTCTGAATACGTCAAGAAGAAGTACGGAGGATATTTCGGAGTCTTCGTCAGAATGTTGGGCGAAGAAGGAGAGGCTTGGGACCTTTTCCGAGTCGTCGCCGGCCAGTTTCCGGCCGACGATCAGATCGCCGCCTACGACGGATTCGTCATCACCGGCAGCTGCAACGACGCTCACGGCGACGATCCTTGGATCTGCCGATTGATCGCTTTGTTGCAGAGATTGGCGTCCTTGAACAAGCGAATCCTCGGTATTTGCTTCGGCCATCAGGTATTTTTGTAATTTCCTTTTTTTTTTAATTTATTTAACGTTCTTTGTTTTGCTAATTTAGATAATAATAATTAGGTTAAAGTTTTAATTTATTTTACCATTTAATTAATTAAAAAAATTGAAATTTTCCTAGTTTAAAGTATATCAATAAGATTAAATTTATCCTAGAATCTCGAAAAGCCATTTTCAAGCTCCCGAGCAAAGAAGAGTGTGAGAGGCTTTGAATTCAAATCTCTATGA

mRNA sequence

ATGGGAATGAAGAGATTTGCAGTGCTTCTCTGCGCCGAAGATTCTGAATACGTCAAGAAGAAGTACGGAGGATATTTCGGAGTCTTCGTCAGAATGTTGGGCGAAGAAGGAGAGGCTTGGGACCTTTTCCGAGTCGTCGCCGGCCAGTTTCCGGCCGACGATCAGATCGCCGCCTACGACGGATTCGTCATCACCGGCAGCTGCAACGACGCTCACGGCGACGATCCTTGGATCTGCCGATTGATCGCTTTGTTGCAGAGATTGGCGTCCTTGAACAAGCGAATCCTCGGTATTTGCTTCGGCCATCAGAATCTCGAAAAGCCATTTTCAAGCTCCCGAGCAAAGAAGAGTGTGAGAGGCTTTGAATTCAAATCTCTATGA

Coding sequence (CDS)

ATGGGAATGAAGAGATTTGCAGTGCTTCTCTGCGCCGAAGATTCTGAATACGTCAAGAAGAAGTACGGAGGATATTTCGGAGTCTTCGTCAGAATGTTGGGCGAAGAAGGAGAGGCTTGGGACCTTTTCCGAGTCGTCGCCGGCCAGTTTCCGGCCGACGATCAGATCGCCGCCTACGACGGATTCGTCATCACCGGCAGCTGCAACGACGCTCACGGCGACGATCCTTGGATCTGCCGATTGATCGCTTTGTTGCAGAGATTGGCGTCCTTGAACAAGCGAATCCTCGGTATTTGCTTCGGCCATCAGAATCTCGAAAAGCCATTTTCAAGCTCCCGAGCAAAGAAGAGTGTGAGAGGCTTTGAATTCAAATCTCTATGA

Protein sequence

MGMKRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYDGFVITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQNLEKPFSSSRAKKSVRGFEFKSL

Homology

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BLAST of Lag0019744 vs. NCBI nr
Match: XP_011653449.1 (gamma-glutamyl peptidase 5 isoform X3 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 5.6e-51
Identity = 98/108 (90.74%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MGMKRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYD 60
           MGMKRFA+LLCAEDSEYVK KYGGYFGVFVRMLGEEGEAWD FRV AG+FPADDQIA YD
Sbjct: 1   MGMKRFALLLCAEDSEYVKMKYGGYFGVFVRMLGEEGEAWDRFRVAAGEFPADDQIADYD 60

Query: 61  GFVITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQNLEKP 109
           GFVI+GSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQ  E P
Sbjct: 61  GFVISGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQIYELP 108

[Close]

BLAST of Lag0019744 vs. NCBI nr
Match: XP_008454459.1 (PREDICTED: gamma-glutamyl peptidase 5-like isoform X2 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-50
Identity = 97/108 (89.81%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MGMKRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYD 60
           MGMKRFA+LLCA+DSEYVK KYGGYFGVFVRMLGEEGEAWD FRV AG+FPADDQIA YD
Sbjct: 1   MGMKRFALLLCADDSEYVKMKYGGYFGVFVRMLGEEGEAWDRFRVAAGEFPADDQIADYD 60

Query: 61  GFVITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQNLEKP 109
           GFVI+GSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQ  E P
Sbjct: 61  GFVISGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQIYELP 108

[Close]

BLAST of Lag0019744 vs. NCBI nr
Match: XP_011653448.1 (gamma-glutamyl peptidase 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 2.1e-50
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MGMKRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYD 60
           MGMKRFA+LLCAEDSEYVK KYGGYFGVFVRMLGEEGEAWD FRV AG+FPADDQIA YD
Sbjct: 1   MGMKRFALLLCAEDSEYVKMKYGGYFGVFVRMLGEEGEAWDRFRVAAGEFPADDQIADYD 60

Query: 61  GFVITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQNL 106
           GFVI+GSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQ L
Sbjct: 61  GFVISGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQIL 105

[Close]

BLAST of Lag0019744 vs. NCBI nr
Match: XP_004147509.1 (gamma-glutamyl peptidase 5 isoform X1 [Cucumis sativus] >KGN53890.1 hypothetical protein Csa_011852 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 2.1e-50
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MGMKRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYD 60
           MGMKRFA+LLCAEDSEYVK KYGGYFGVFVRMLGEEGEAWD FRV AG+FPADDQIA YD
Sbjct: 1   MGMKRFALLLCAEDSEYVKMKYGGYFGVFVRMLGEEGEAWDRFRVAAGEFPADDQIADYD 60

Query: 61  GFVITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQNL 106
           GFVI+GSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQ L
Sbjct: 61  GFVISGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQIL 105

[Close]

BLAST of Lag0019744 vs. NCBI nr
Match: XP_008454458.1 (PREDICTED: gamma-glutamyl peptidase 5-like isoform X1 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 4.8e-50
Identity = 96/105 (91.43%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MGMKRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYD 60
           MGMKRFA+LLCA+DSEYVK KYGGYFGVFVRMLGEEGEAWD FRV AG+FPADDQIA YD
Sbjct: 1   MGMKRFALLLCADDSEYVKMKYGGYFGVFVRMLGEEGEAWDRFRVAAGEFPADDQIADYD 60

Query: 61  GFVITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQNL 106
           GFVI+GSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQ L
Sbjct: 61  GFVISGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQIL 105

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BLAST of Lag0019744 vs. ExPASy Swiss-Prot
Match: O82225 (Gamma-glutamyl peptidase 5 OS=Arabidopsis thaliana OX=3702 GN=GGP5 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.5e-33
Identity = 64/119 (53.78%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 4   KRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYDGFV 63
           KRFA+ L   DS +VKK YGGYF VFV   GE+GE WDLFRV+ G+FP D  +  YDGFV
Sbjct: 6   KRFALFLATSDSTFVKKAYGGYFNVFVSTFGEDGEQWDLFRVIDGEFPDDKDLDKYDGFV 65

Query: 64  ITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQNLEKPFSSSRAKKSVRGFE 123
           I+GS NDA GDD WI +L +L Q+L  + K++LGICFGHQ L +     +  ++ RG +
Sbjct: 66  ISGSLNDAFGDDDWIVKLCSLCQKLDDMKKKVLGICFGHQILSR-IKGGKVGRASRGLD 123

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BLAST of Lag0019744 vs. ExPASy Swiss-Prot
Match: Q9M0A5 (Gamma-glutamyl peptidase 3 OS=Arabidopsis thaliana OX=3702 GN=GGP3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-30
Identity = 60/100 (60.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 4   KRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYDGFV 63
           KRFA+ L   DSE+VKK YGGYF VFV   GEEGE WDLFRV+ GQFP ++ +  YDGFV
Sbjct: 8   KRFALFLATCDSEFVKKTYGGYFNVFVSTFGEEGEQWDLFRVIDGQFPDENDLDKYDGFV 67

Query: 64  ITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQ 104
           I+GS +DA GD  WI +L  + Q+L  + K++LGICFGHQ
Sbjct: 68  ISGSPHDAFGDADWIVKLCEVCQKLDHMKKKVLGICFGHQ 107

[Close]

BLAST of Lag0019744 vs. ExPASy Swiss-Prot
Match: Q9M0A7 (Gamma-glutamyl peptidase 1 OS=Arabidopsis thaliana OX=3702 GN=GGP1 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-28
Identity = 58/115 (50.43%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 4   KRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYDGFV 63
           KR+A+ L   DSE+VKK YGGY  VFV   G+EGE WD FRVV+G+FP +  +  YDGFV
Sbjct: 5   KRYALFLATLDSEFVKKTYGGYHNVFVTTFGDEGEHWDSFRVVSGEFPDEKDLEKYDGFV 64

Query: 64  ITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQNLEKPFSSS--RAKK 117
           I+GS +DA  +D WI +L  +++++  + K+ILGICFGHQ + +    +  RAKK
Sbjct: 65  ISGSSHDAFENDDWILKLCDIVKKIDEMKKKILGICFGHQIIARVRGGTVGRAKK 119

[Close]

BLAST of Lag0019744 vs. ExPASy Swiss-Prot
Match: Q9M0A6 (Gamma-glutamyl peptidase 2 OS=Arabidopsis thaliana OX=3702 GN=GGP2 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.1e-28
Identity = 52/101 (51.49%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 3   MKRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYDGF 62
           ++R+A+     DSE+VK+ YGGYF VFV   G+EGE WDLFRV+ G+FP D+ +  Y+GF
Sbjct: 5   IRRYALFQATPDSEFVKEMYGGYFNVFVSAFGDEGEQWDLFRVIDGEFPRDEDLEKYEGF 64

Query: 63  VITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQ 104
           VI+GS +DA  ++ WI  L ++ ++L  + K+ILGICFGHQ
Sbjct: 65  VISGSLHDAFTEEDWIIELCSVCKKLDVMKKKILGICFGHQ 105

[Close]

BLAST of Lag0019744 vs. ExPASy Swiss-Prot
Match: F4INN2 (Gamma-glutamyl peptidase 4 OS=Arabidopsis thaliana OX=3702 GN=GGP4 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-27
Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 4   KRFAVLLCAEDSEYVKKKYGGYFGVFVRMLGEEGEAWDLFRVVAGQFPADDQIAAYDGFV 63
           K++ + L   DSE+ KK YGGY  VFV +LG+EGE WD FRVV G+FP +  +  Y+GFV
Sbjct: 5   KKYLLFLATPDSEFAKKTYGGYHNVFVSLLGDEGEQWDSFRVVDGEFPEEKDLEKYEGFV 64

Query: 64  ITGSCNDAHGDDPWICRLIALLQRLASLNKRILGICFGHQ 104
           I+GS +DA  D  WI +L  ++++L  +NK++LGICFGHQ
Sbjct: 65  ISGSSHDAFQDTDWILKLCDIIKKLDDMNKKVLGICFGHQ 104

The following BLAST results are available for this feature:

BLAST of Lag0019744 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653449.1	5.6e-51	90.74	gamma-glutamyl peptidase 5 isoform X3 [Cucumis sativus]	[more]
XP_008454459.1	1.3e-50	89.81	PREDICTED: gamma-glutamyl peptidase 5-like isoform X2 [Cucumis melo]	[more]
XP_011653448.1	2.1e-50	92.38	gamma-glutamyl peptidase 5 isoform X2 [Cucumis sativus]	[more]
XP_004147509.1	2.1e-50	92.38	gamma-glutamyl peptidase 5 isoform X1 [Cucumis sativus] >KGN53890.1 hypothetical...	[more]
XP_008454458.1	4.8e-50	91.43	PREDICTED: gamma-glutamyl peptidase 5-like isoform X1 [Cucumis melo]	[more]

BLAST of Lag0019744 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82225	5.5e-33	53.78	Gamma-glutamyl peptidase 5 OS=Arabidopsis thaliana OX=3702 GN=GGP5 PE=2 SV=1	[more]
Q9M0A5	1.2e-30	60.00	Gamma-glutamyl peptidase 3 OS=Arabidopsis thaliana OX=3702 GN=GGP3 PE=1 SV=1	[more]
Q9M0A7	4.1e-28	50.43	Gamma-glutamyl peptidase 1 OS=Arabidopsis thaliana OX=3702 GN=GGP1 PE=1 SV=1	[more]
Q9M0A6	9.1e-28	51.49	Gamma-glutamyl peptidase 2 OS=Arabidopsis thaliana OX=3702 GN=GGP2 PE=2 SV=1	[more]
F4INN2	1.2e-27	52.00	Gamma-glutamyl peptidase 4 OS=Arabidopsis thaliana OX=3702 GN=GGP4 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029062	Class I glutamine amidotransferase-like	GENE3D	3.40.50.880		coord: 16..107 e-value: 5.7E-19 score: 70.2
IPR029062	Class I glutamine amidotransferase-like	SUPERFAMILY	52317	Class I glutamine amidotransferase-like	coord: 24..105
None	No IPR available	PANTHER	PTHR42695:SF17	CLASS I GLUTAMINE AMIDOTRANSFERASE-LIKE PROTEIN-RELATED	coord: 4..109
IPR044992	Glutamine amidotransferase domain containing protein ChyE-like	PANTHER	PTHR42695	GLUTAMINE AMIDOTRANSFERASE YLR126C-RELATED	coord: 4..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0019744.1	Lag0019744.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol